RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 PKDREJQ9NTG1 2253 aa12.54□□□□□ -0.4
SHANK2-210ENST00000449116 IGLV3-9A0A075B6K5 115 aa12.54□□□□□ -0.4
SHANK2-210ENST00000449116 TRBV5-5A0A0J9YX44 114 aa12.54□□□□□ -0.4
SHANK2-210ENST00000449116 A0A1W2PPR1 153 aa12.54□□□□□ -0.4
SHANK2-210ENST00000449116 CD300LBA8K4G0 201 aa12.54□□□□□ -0.4
SHANK2-210ENST00000449116 IQCF6A8MYZ5 107 aa12.54□□□□□ -0.4
SHANK2-210ENST00000449116 HLA-DPB1P04440 258 aa12.54□□□□□ -0.4
SHANK2-210ENST00000449116 CD36P16671 472 aa12.54□□□□□ -0.4
SHANK2-210ENST00000449116 ACKR3P25106 362 aa12.54□□□□□ -0.4
SHANK2-210ENST00000449116 SERPINF1P36955 418 aa12.54□□□□□ -0.4
SHANK2-210ENST00000449116 TGFBR2P37173 567 aa12.54□□□□□ -0.4
SHANK2-210ENST00000449116 DDOSTP39656 456 aa12.54□□□□□ -0.4
SHANK2-210ENST00000449116 KLF3P57682 345 aaPredicted RBP12.54□□□□□ -0.4
SHANK2-210ENST00000449116 RIPPLY1Q0D2K3 151 aa12.54□□□□□ -0.4
SHANK2-210ENST00000449116 TNK1Q13470 666 aa12.54□□□□□ -0.4
SHANK2-210ENST00000449116 GPR141Q7Z602 305 aa12.54□□□□□ -0.4
SHANK2-210ENST00000449116 LRP11Q86VZ4 500 aa12.54□□□□□ -0.4
SHANK2-210ENST00000449116 CSNK2A3Q8NEV1 391 aa12.54□□□□□ -0.4
SHANK2-210ENST00000449116 OR13C3Q8NGS6 347 aa12.54□□□□□ -0.4
SHANK2-210ENST00000449116 THRSPQ92748 146 aa12.54□□□□□ -0.4
SHANK2-210ENST00000449116 FBXW5Q969U6 566 aa12.54□□□□□ -0.4
SHANK2-210ENST00000449116 TMIGD2Q96BF3 282 aa12.54□□□□□ -0.4
SHANK2-210ENST00000449116 C10orf35Q96D05 121 aa12.54□□□□□ -0.4
SHANK2-210ENST00000449116 YIPF6Q96EC8 236 aa12.54□□□□□ -0.4
SHANK2-210ENST00000449116 SYT3Q9BQG1 590 aa12.54□□□□□ -0.4
SHANK2-210ENST00000449116 MRPL37Q9BZE1 423 aaKnown RBP12.54□□□□□ -0.4
SHANK2-210ENST00000449116 PLEKHA1Q9HB21 404 aa12.54□□□□□ -0.4
SHANK2-210ENST00000449116 ZNF275Q9NSD4 429 aaPredicted RBP12.54□□□□□ -0.4
SHANK2-210ENST00000449116 PIGLQ9Y2B2 252 aa12.54□□□□□ -0.4
SHANK2-210ENST00000449116 DOPEY2Q9Y3R5 2298 aa12.54□□□□□ -0.4
SHANK2-210ENST00000449116 PLCE1Q9P212 2302 aa12.53□□□□□ -0.4
SHANK2-210ENST00000449116 HS3ST1O14792 307 aa12.53□□□□□ -0.4
SHANK2-210ENST00000449116 TIMM8AO60220 97 aaPredicted RBP12.53□□□□□ -0.4
SHANK2-210ENST00000449116 SC5DO75845 299 aa12.53□□□□□ -0.4
SHANK2-210ENST00000449116 RGS9O75916 674 aaPredicted RBP12.53□□□□□ -0.4
SHANK2-210ENST00000449116 IGHV3-13P01766 116 aa12.53□□□□□ -0.4
SHANK2-210ENST00000449116 CD2P06729 351 aa12.53□□□□□ -0.4
SHANK2-210ENST00000449116 TTKP33981 857 aa12.53□□□□□ -0.4
SHANK2-210ENST00000449116 MAGEB1P43366 347 aa12.53□□□□□ -0.4
SHANK2-210ENST00000449116 SOX2P48431 317 aa12.53□□□□□ -0.4
SHANK2-210ENST00000449116 EVX1P49640 407 aa12.53□□□□□ -0.4
SHANK2-210ENST00000449116 TLE4Q04727 773 aa12.53□□□□□ -0.4
SHANK2-210ENST00000449116 EFNB3Q15768 340 aa12.53□□□□□ -0.4
SHANK2-210ENST00000449116 MOGQ16653 247 aa12.53□□□□□ -0.4
SHANK2-210ENST00000449116 ACSM3Q53FZ2 586 aa12.53□□□□□ -0.4
SHANK2-210ENST00000449116 TMEM255AQ5JRV8 349 aa12.53□□□□□ -0.4
SHANK2-210ENST00000449116 ZBTB37Q5TC79 503 aa12.53□□□□□ -0.4
SHANK2-210ENST00000449116 OR5AS1Q8N127 324 aa12.53□□□□□ -0.4
SHANK2-210ENST00000449116 FTMTQ8N4E7 242 aa12.53□□□□□ -0.4
SHANK2-210ENST00000449116 C14orf79Q96F83 325 aa12.53□□□□□ -0.4
SHANK2-210ENST00000449116 OR14A2Q96R54 314 aa12.53□□□□□ -0.4
SHANK2-210ENST00000449116 CLEC4MQ9H2X3 399 aaPredicted RBP12.53□□□□□ -0.4
SHANK2-210ENST00000449116 MRPL15Q9P015 296 aaKnown RBP12.53□□□□□ -0.4
SHANK2-210ENST00000449116 ENPP5Q9UJA9 477 aa12.53□□□□□ -0.4
SHANK2-210ENST00000449116 STUB1Q9UNE7 303 aa12.53□□□□□ -0.4
SHANK2-210ENST00000449116 ABCA4P78363 2273 aa12.53□□□□□ -0.4
SHANK2-210ENST00000449116 ZNF816-ZNF321PA0A0X1KG74 233 aa12.52□□□□□ -0.41
SHANK2-210ENST00000449116 TRDV1A0A1B0GX56 115 aa12.52□□□□□ -0.41
SHANK2-210ENST00000449116 A0A1W2PPW3 197 aa12.52□□□□□ -0.41
SHANK2-210ENST00000449116 ZNF879B4DU55 563 aa12.52□□□□□ -0.41
SHANK2-210ENST00000449116 B9A039 149 aa12.52□□□□□ -0.41
SHANK2-210ENST00000449116 LMX1BO60663 402 aa12.52□□□□□ -0.41
SHANK2-210ENST00000449116 GATBO75879 557 aaKnown RBP12.52□□□□□ -0.41
SHANK2-210ENST00000449116 FAHP16930 419 aa12.52□□□□□ -0.41
SHANK2-210ENST00000449116 ZNF20P17024 532 aa12.52□□□□□ -0.41
SHANK2-210ENST00000449116 GALP22466 123 aa12.52□□□□□ -0.41
SHANK2-210ENST00000449116 MAPK3P27361 379 aaPredicted RBP12.52□□□□□ -0.41
SHANK2-210ENST00000449116 CRYBB2P43320 205 aa12.52□□□□□ -0.41
SHANK2-210ENST00000449116 FABP5Q01469 135 aa12.52□□□□□ -0.41
SHANK2-210ENST00000449116 BLMHQ13867 455 aa12.52□□□□□ -0.41
SHANK2-210ENST00000449116 INSL4Q14641 139 aa12.52□□□□□ -0.41
SHANK2-210ENST00000449116 ALKBH6Q3KRA9 238 aa12.52□□□□□ -0.41
SHANK2-210ENST00000449116 CD200R1LQ6Q8B3 271 aa12.52□□□□□ -0.41
SHANK2-210ENST00000449116 TMEM91Q6ZNR0 172 aa12.52□□□□□ -0.41
SHANK2-210ENST00000449116 KRT74Q7RTS7 529 aa12.52□□□□□ -0.41
SHANK2-210ENST00000449116 ZNF295-AS1Q8N0V1 137 aa12.52□□□□□ -0.41
SHANK2-210ENST00000449116 FBXL14Q8N1E6 418 aa12.52□□□□□ -0.41
SHANK2-210ENST00000449116 MUC15Q8N387 334 aa12.52□□□□□ -0.41
SHANK2-210ENST00000449116 BHLHE23Q8NDY6 225 aa12.52□□□□□ -0.41
SHANK2-210ENST00000449116 TMEM106AQ96A25 262 aa12.52□□□□□ -0.41
SHANK2-210ENST00000449116 FGGYQ96C11 551 aa12.52□□□□□ -0.41
SHANK2-210ENST00000449116 FAIMQ9NVQ4 179 aa12.52□□□□□ -0.41
SHANK2-210ENST00000449116 TAAR3PQ9P1P4 343 aa12.52□□□□□ -0.41
SHANK2-210ENST00000449116 MYEF2Q9P2K5 600 aaKnown RBP12.52□□□□□ -0.41
SHANK2-210ENST00000449116 A6NIN4 97 aa12.51□□□□□ -0.41
SHANK2-210ENST00000449116 ANKRD30BLA7E2S9 258 aa12.51□□□□□ -0.41
SHANK2-210ENST00000449116 GABRPO00591 440 aa12.51□□□□□ -0.41
SHANK2-210ENST00000449116 CST4P01036 141 aa12.51□□□□□ -0.41
SHANK2-210ENST00000449116 GADD45AP24522 165 aa12.51□□□□□ -0.41
SHANK2-210ENST00000449116 TIMM50Q3ZCQ8 353 aa12.51□□□□□ -0.41
SHANK2-210ENST00000449116 ZMAT1Q5H9K5 638 aa12.51□□□□□ -0.41
SHANK2-210ENST00000449116 PAMR1Q6UXH9 720 aa12.51□□□□□ -0.41
SHANK2-210ENST00000449116 UNQ9370/PRO34162Q6UXP9 181 aa12.51□□□□□ -0.41
SHANK2-210ENST00000449116 CEACAM19Q7Z692 300 aa12.51□□□□□ -0.41
SHANK2-210ENST00000449116 SATL1Q86VE3 508 aa12.51□□□□□ -0.41
SHANK2-210ENST00000449116 TMEM200AQ86VY9 491 aa12.51□□□□□ -0.41
SHANK2-210ENST00000449116 PARP16Q8N5Y8 322 aa12.51□□□□□ -0.41
SHANK2-210ENST00000449116 ZNF611Q8N823 705 aa12.51□□□□□ -0.41
SHANK2-210ENST00000449116 OR8G5Q8NG78 346 aa12.51□□□□□ -0.41
SHANK2-210ENST00000449116 PHYHIPQ92561 330 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms