RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 NXNL2Q5VZ03 156 aa11.77□□□□□ -0.53
RTFDC1-204ENST00000449062 ZNF841Q6ZN19 808 aa11.77□□□□□ -0.53
RTFDC1-204ENST00000449062 CCDC121Q6ZUS5 278 aa11.77□□□□□ -0.53
RTFDC1-204ENST00000449062 WDR86Q86TI4 376 aa11.77□□□□□ -0.53
RTFDC1-204ENST00000449062 MUC20Q8N307 709 aaPredicted RBP11.77□□□□□ -0.53
RTFDC1-204ENST00000449062 DEFB108BQ8NET1 73 aa11.77□□□□□ -0.53
RTFDC1-204ENST00000449062 PYDC1Q8WXC3 89 aa11.77□□□□□ -0.53
RTFDC1-204ENST00000449062 DVL3Q92997 716 aaPredicted RBP11.77□□□□□ -0.53
RTFDC1-204ENST00000449062 PKP2Q99959 881 aa11.77□□□□□ -0.53
RTFDC1-204ENST00000449062 GABARAPL3Q9BY60 117 aa11.77□□□□□ -0.53
RTFDC1-204ENST00000449062 OR10A2Q9H208 303 aa11.77□□□□□ -0.53
RTFDC1-204ENST00000449062 RGCCQ9H4X1 137 aa11.77□□□□□ -0.53
RTFDC1-204ENST00000449062 UFSP2Q9NUQ7 469 aa11.77□□□□□ -0.53
RTFDC1-204ENST00000449062 PCDHB10Q9UN67 800 aa11.77□□□□□ -0.53
RTFDC1-204ENST00000449062 NOP16Q9Y3C1 178 aaKnown RBP11.77□□□□□ -0.53
RTFDC1-204ENST00000449062 RHBDD3Q9Y3P4 386 aa11.77□□□□□ -0.53
RTFDC1-204ENST00000449062 PPIAL4AQ9Y536 164 aa11.77□□□□□ -0.53
RTFDC1-204ENST00000449062 DOCK11Q5JSL3 2073 aa11.76□□□□□ -0.53
RTFDC1-204ENST00000449062 LOC105371242A0A075B767 164 aa11.76□□□□□ -0.53
RTFDC1-204ENST00000449062 A0A0G2JMP0 313 aa11.76□□□□□ -0.53
RTFDC1-204ENST00000449062 A0A0X1KG70 313 aa11.76□□□□□ -0.53
RTFDC1-204ENST00000449062 ACOD1A6NK06 481 aa11.76□□□□□ -0.53
RTFDC1-204ENST00000449062 LRRC30A6NM36 301 aa11.76□□□□□ -0.53
RTFDC1-204ENST00000449062 TBX1O43435 398 aa11.76□□□□□ -0.53
RTFDC1-204ENST00000449062 CFL1P23528 166 aaKnown RBP11.76□□□□□ -0.53
RTFDC1-204ENST00000449062 SRP14P37108 136 aaKnown RBP11.76□□□□□ -0.53
RTFDC1-204ENST00000449062 PSMB10P40306 273 aa11.76□□□□□ -0.53
RTFDC1-204ENST00000449062 RPS7P62081 194 aaKnown RBP11.76□□□□□ -0.53
RTFDC1-204ENST00000449062 SRSF2Q01130 221 aaKnown RBP11.76□□□□□ -0.53
RTFDC1-204ENST00000449062 KRTAP24-1Q3LI83 254 aa11.76□□□□□ -0.53
RTFDC1-204ENST00000449062 LYPD2Q6UXB3 125 aa11.76□□□□□ -0.53
RTFDC1-204ENST00000449062 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.76□□□□□ -0.53
RTFDC1-204ENST00000449062 RFLNBQ8N5W9 214 aa11.76□□□□□ -0.53
RTFDC1-204ENST00000449062 OR4M2Q8NGB6 313 aa11.76□□□□□ -0.53
RTFDC1-204ENST00000449062 TMEM158Q8WZ71 300 aa11.76□□□□□ -0.53
RTFDC1-204ENST00000449062 IL4I1Q96RQ9 567 aa11.76□□□□□ -0.53
RTFDC1-204ENST00000449062 ADAT1Q9BUB4 502 aaKnown RBP11.76□□□□□ -0.53
RTFDC1-204ENST00000449062 ADGRL4Q9HBW9 690 aa11.76□□□□□ -0.53
RTFDC1-204ENST00000449062 BRD7Q9NPI1 651 aa11.76□□□□□ -0.53
RTFDC1-204ENST00000449062 FAM206AQ9NX38 181 aa11.76□□□□□ -0.53
RTFDC1-204ENST00000449062 RNF7Q9UBF6 113 aa11.76□□□□□ -0.53
RTFDC1-204ENST00000449062 METRNQ9UJH8 293 aa11.76□□□□□ -0.53
RTFDC1-204ENST00000449062 LAMP5Q9UJQ1 280 aa11.76□□□□□ -0.53
RTFDC1-204ENST00000449062 LRP12Q9Y561 859 aa11.76□□□□□ -0.53
RTFDC1-204ENST00000449062 RNF212BA8MTL3 300 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 ZNF254O75437 659 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 SRSF10O75494 262 aaKnown RBP11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 CST4P01036 141 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 IGLV3-1P01715 115 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 ALPLP05186 524 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 MRPL3P09001 348 aaKnown RBP11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 ZNF12P17014 697 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 CFHR2P36980 270 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 PSMA6P60900 246 aaKnown RBP11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 PAX8Q06710 450 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 TIGD6Q17RP2 521 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 FAM76BQ5HYJ3 339 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 DCAF12L2Q5VW00 463 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 ZNF826PQ6ZT77 177 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 C1QL2Q7Z5L3 287 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 KRT77Q7Z794 578 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 PHC2Q8IXK0 858 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 ZNF679Q8IYX0 411 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 C1orf87Q8N0U7 546 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 GCSAMQ8N6F7 178 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 OR8B12Q8NGG6 310 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 ASB17Q8WXJ9 295 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 PPP1R14AQ96A00 147 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 ITPKCQ96DU7 683 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 PGAM5Q96HS1 289 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 OR8B4Q96RC9 309 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 FGF23Q9GZV9 251 aaPredicted RBP11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 C7orf69Q9H7B7 122 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 METTL17Q9H7H0 456 aaPredicted RBP11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 FN3KRPQ9HA64 309 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 MIOXQ9UGB7 285 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 INSIG2Q9Y5U4 225 aa11.75□□□□□ -0.53
RTFDC1-204ENST00000449062 A0A0U1RQV5 110 aa11.74□□□□□ -0.53
RTFDC1-204ENST00000449062 SAC3D1A6NKF1 404 aa11.74□□□□□ -0.53
RTFDC1-204ENST00000449062 SLC22A31A6NKX4 558 aa11.74□□□□□ -0.53
RTFDC1-204ENST00000449062 ANKRD30BLA7E2S9 258 aa11.74□□□□□ -0.53
RTFDC1-204ENST00000449062 LGALS8O00214 317 aa11.74□□□□□ -0.53
RTFDC1-204ENST00000449062 PSMD9O00233 223 aa11.74□□□□□ -0.53
RTFDC1-204ENST00000449062 ADRA2CP18825 462 aa11.74□□□□□ -0.53
RTFDC1-204ENST00000449062 CD80P33681 288 aa11.74□□□□□ -0.53
RTFDC1-204ENST00000449062 ZNF684Q5T5D7 378 aa11.74□□□□□ -0.53
RTFDC1-204ENST00000449062 LCN1P1Q5VSP4 162 aa11.74□□□□□ -0.53
RTFDC1-204ENST00000449062 KCTD18Q6PI47 426 aaPredicted RBP11.74□□□□□ -0.53
RTFDC1-204ENST00000449062 GALNT4Q8N4A0 578 aa11.74□□□□□ -0.53
RTFDC1-204ENST00000449062 C19orf18Q8NEA5 215 aa11.74□□□□□ -0.53
RTFDC1-204ENST00000449062 CSNK2A3Q8NEV1 391 aa11.74□□□□□ -0.53
RTFDC1-204ENST00000449062 OR11L1Q8NGX0 322 aa11.74□□□□□ -0.53
RTFDC1-204ENST00000449062 UBE2FQ969M7 185 aa11.74□□□□□ -0.53
RTFDC1-204ENST00000449062 ITFG2Q969R8 447 aa11.74□□□□□ -0.53
RTFDC1-204ENST00000449062 PRRG3Q9BZD7 231 aa11.74□□□□□ -0.53
RTFDC1-204ENST00000449062 TLNRD1Q9H1K6 362 aa11.74□□□□□ -0.53
RTFDC1-204ENST00000449062 C14orf119Q9NWQ9 140 aa11.74□□□□□ -0.53
RTFDC1-204ENST00000449062 C1orf123Q9NWV4 160 aa11.74□□□□□ -0.53
RTFDC1-204ENST00000449062 USE1Q9NZ43 259 aa11.74□□□□□ -0.53
RTFDC1-204ENST00000449062 ENOPH1Q9UHY7 261 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms