RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 ZNF826PQ6ZT77 177 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 SLC30A8Q8IWU4 369 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 CLEC4FQ8N1N0 589 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 OR11H1Q8NG94 326 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 BCAS4Q8TDM0 211 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 TMEM106AQ96A25 262 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 C12orf43Q96C57 262 aaKnown RBP2.48□□□□□ -2.01
PMS1-215ENST00000447232 RASD2Q96D21 266 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 RNF183Q96D59 192 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 RBM14Q96PK6 669 aaKnown RBP2.48□□□□□ -2.01
PMS1-215ENST00000447232 TRNT1Q96Q11 434 aaKnown RBP2.48□□□□□ -2.01
PMS1-215ENST00000447232 SLC25A33Q9BSK2 321 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 THAP7Q9BT49 309 aaPredicted RBP2.48□□□□□ -2.01
PMS1-215ENST00000447232 DPY30Q9C005 99 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 DNTTIP1Q9H147 329 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 C1orf109Q9NX04 203 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 NDUFAF1Q9Y375 327 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 LRP12Q9Y561 859 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 IGKV1D-43A0A0B4J1Z2 117 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 LRRN3E7EW58 273 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 H3BUI4 141 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 SLC28A1O00337 649 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 OVOL1O14753 267 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 SUPT7LO94864 414 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 IGHV1-8P0DP01 117 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 LAP3P28838 519 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 ELLP55199 621 aaPredicted RBP2.48□□□□□ -2.01
PMS1-215ENST00000447232 SLC35B1P78383 322 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 ENDOGQ14249 297 aaKnown RBP2.48□□□□□ -2.01
PMS1-215ENST00000447232 SYPL1Q16563 259 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 DGUOKQ16854 277 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 RFTN2Q52LD8 501 aaPredicted RBP2.48□□□□□ -2.01
PMS1-215ENST00000447232 GPAT3Q53EU6 434 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 RNF220Q5VTB9 566 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 LIPMQ5VYY2 423 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 TNFAIP8L2Q6P589 184 aaPredicted RBP2.48□□□□□ -2.01
PMS1-215ENST00000447232 TEX38Q6PEX7 206 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 ZNF788Q6ZQV5 615 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 LRRC74BQ6ZQY2 392 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 SERPINA11Q86U17 422 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 NATD1Q8N6N6 113 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 ANKFN1Q8N957 763 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 NOXO1Q8NFA2 376 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 OR11H6Q8NGC7 330 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 OR9Q1Q8NGQ5 310 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 FBXO25Q8TCJ0 367 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 PHLDA1Q8WV24 401 aaPredicted RBP2.48□□□□□ -2.01
PMS1-215ENST00000447232 DCUN1D4Q92564 292 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 TMEM237Q96Q45 408 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 MTHFD2LQ9H903 347 aaPredicted RBP2.48□□□□□ -2.01
PMS1-215ENST00000447232 SMURF2Q9HAU4 748 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 RRAGDQ9NQL2 400 aaPredicted RBP2.48□□□□□ -2.01
PMS1-215ENST00000447232 C1orf123Q9NWV4 160 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 TAS2R5Q9NYW4 299 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 PTTG3PQ9NZH4 202 aa2.48□□□□□ -2.01
PMS1-215ENST00000447232 SLC25A10Q9UBX3 287 aaPredicted RBP2.48□□□□□ -2.01
PMS1-215ENST00000447232 RNF103-CHMP3A0A140T963 221 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 C11orf98E9PRG8 122 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 M0QZK8 103 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 HMGN4O00479 90 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 XRCC3O43542 346 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 SLC2A10O95528 541 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 ADORA3P0DMS8 318 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 ZNF823P16415 610 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 SOAT1P35610 550 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 MAGEA12P43365 314 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 MVDP53602 400 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 PCBD1P61457 104 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 HPCAP84074 193 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 ZNF45Q02386 682 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 TNFRSF9Q07011 255 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 CFAP157Q5JU67 520 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 FOXL2NBQ6ZUU3 175 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 TSEN54Q7Z6J9 526 aaKnown RBP2.47□□□□□ -2.01
PMS1-215ENST00000447232 DHDDSQ86SQ9 333 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 CTAGE3PQ8IX95 158 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 C11orf53Q8IXP5 236 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 CLIP4Q8N3C7 705 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 CLRN3Q8NCR9 226 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 OR5J2Q8NH18 312 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 MYOZ3Q8TDC0 251 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 SEH1LQ96EE3 360 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 GAFA1Q96PS6 74 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 MRPL57Q9BQC6 102 aaKnown RBP2.47□□□□□ -2.01
PMS1-215ENST00000447232 TINAGL1Q9GZM7 467 aaPredicted RBP2.47□□□□□ -2.01
PMS1-215ENST00000447232 MRPL46Q9H2W6 279 aaKnown RBP2.47□□□□□ -2.01
PMS1-215ENST00000447232 IKZF5Q9H5V7 419 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 TUBA4BQ9H853 241 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 ATAD3AQ9NVI7 634 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 FAM30AQ9NZY2 134 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 A0A0J9YWU9 116 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 I3L521 148 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 SIGLEC5O15389 551 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 IGLV1-51P01701 117 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 IGLV2-14P01704 120 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 ARG1P05089 322 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 BGNP21810 368 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 CD24P25063 80 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 HPCAL1P37235 193 aa2.47□□□□□ -2.01
PMS1-215ENST00000447232 RPL3P39023 403 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms