RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 OR56B1Q8NGI3 324 aa16.88■□□□□ 0.29
SDCBP-204ENST00000447182 RLN3Q8WXF3 142 aa16.88■□□□□ 0.29
SDCBP-204ENST00000447182 ROBO4Q8WZ75 1007 aa16.88■□□□□ 0.29
SDCBP-204ENST00000447182 SAT2Q96F10 170 aaPredicted RBP16.88■□□□□ 0.29
SDCBP-204ENST00000447182 SPACA5Q96QH8 159 aa16.88■□□□□ 0.29
SDCBP-204ENST00000447182 RTBDNQ9BSG5 229 aaPredicted RBP16.88■□□□□ 0.29
SDCBP-204ENST00000447182 DNAJB11Q9UBS4 358 aa16.88■□□□□ 0.29
SDCBP-204ENST00000447182 VDAC3Q9Y277 283 aa16.88■□□□□ 0.29
SDCBP-204ENST00000447182 MSGN1A6NI15 193 aa16.88■□□□□ 0.29
SDCBP-204ENST00000447182 GLULP15104 373 aa16.88■□□□□ 0.29
SDCBP-204ENST00000447182 FOLR1P15328 257 aa16.88■□□□□ 0.29
SDCBP-204ENST00000447182 CCL1P22362 96 aa16.88■□□□□ 0.29
SDCBP-204ENST00000447182 CD27P26842 260 aa16.88■□□□□ 0.29
SDCBP-204ENST00000447182 OR3A4PP47883 348 aa16.88■□□□□ 0.29
SDCBP-204ENST00000447182 CSNK1EP49674 416 aaKnown RBP16.88■□□□□ 0.29
SDCBP-204ENST00000447182 C1orf189Q5VU69 101 aa16.88■□□□□ 0.29
SDCBP-204ENST00000447182 Q7L0L9 218 aa16.88■□□□□ 0.29
SDCBP-204ENST00000447182 ADAMTS17Q8TE56 1095 aa16.88■□□□□ 0.29
SDCBP-204ENST00000447182 SSC4DQ8WTU2 575 aa16.88■□□□□ 0.29
SDCBP-204ENST00000447182 DUSP15Q9H1R2 295 aaPredicted RBP16.88■□□□□ 0.29
SDCBP-204ENST00000447182 UQCC1Q9NVA1 299 aa16.88■□□□□ 0.29
SDCBP-204ENST00000447182 IGHV1OR15-9A0A0B4J2B8 117 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 ADAP1O75689 374 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 RAD51DO75771 328 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 ZNF17P17021 662 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 IL15RAQ13261 267 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 ZNF585AQ6P3V2 769 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 C16orf47Q6ZP98 133 aaPredicted RBP16.87■□□□□ 0.29
SDCBP-204ENST00000447182 ABHD12BQ7Z5M8 362 aaPredicted RBP16.87■□□□□ 0.29
SDCBP-204ENST00000447182 CBLN2Q8IUK8 224 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 ADPRHL1Q8NDY3 354 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 OR8B12Q8NGG6 310 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 OR5H2Q8NGV7 314 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 OR2AJ1Q8NGZ0 328 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 RHBDD1Q8TEB9 315 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 RNF138Q8WVD3 245 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 SMIM8Q96KF7 97 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 C2orf50Q96LR7 162 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 ADAT1Q9BUB4 502 aaKnown RBP16.87■□□□□ 0.29
SDCBP-204ENST00000447182 SLC26A1Q9H2B4 701 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.87■□□□□ 0.29
SDCBP-204ENST00000447182 OR5AC2Q9NZP5 309 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 SEMA5BQ9P283 1151 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 IGHV1OR21-1A0A087WYE8 117 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 ZNF354AO60765 605 aaPredicted RBP16.87■□□□□ 0.29
SDCBP-204ENST00000447182 CSTBP04080 98 aaKnown RBP16.87■□□□□ 0.29
SDCBP-204ENST00000447182 HEXAP06865 529 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 PET100P0DJ07 73 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 PGA4P0DJD7 388 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 PGA3P0DJD8 388 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 OR1D5P58170 312 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 SLC9A3R2Q15599 337 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 ANKRD55Q3KP44 614 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 SLC25A53Q5H9E4 307 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 PLXDC1Q8IUK5 500 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 APCDD1LQ8NCL9 501 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 NOXO1Q8NFA2 376 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 URM1Q9BTM9 101 aaKnown RBP16.87■□□□□ 0.29
SDCBP-204ENST00000447182 SLC5A7Q9GZV3 580 aa16.87■□□□□ 0.29
SDCBP-204ENST00000447182 ZNF705EA8MWA4 302 aaPredicted RBP16.86■□□□□ 0.29
SDCBP-204ENST00000447182 H3BML4 177 aa16.86■□□□□ 0.29
SDCBP-204ENST00000447182 GIMD1P0DJR0 217 aa16.86■□□□□ 0.29
SDCBP-204ENST00000447182 RFC3P40938 356 aa16.86■□□□□ 0.29
SDCBP-204ENST00000447182 CTAG1AP78358 180 aa16.86■□□□□ 0.29
SDCBP-204ENST00000447182 CFHR1Q03591 330 aa16.86■□□□□ 0.29
SDCBP-204ENST00000447182 AADACL3Q5VUY0 350 aa16.86■□□□□ 0.29
SDCBP-204ENST00000447182 FAM89BQ8N5H3 189 aa16.86■□□□□ 0.29
SDCBP-204ENST00000447182 ARHGAP5-AS1Q96IT6 56 aa16.86■□□□□ 0.29
SDCBP-204ENST00000447182 CHRDQ9H2X0 955 aa16.86■□□□□ 0.29
SDCBP-204ENST00000447182 BANF2Q9H503 90 aa16.86■□□□□ 0.29
SDCBP-204ENST00000447182 TREM1Q9NP99 234 aa16.86■□□□□ 0.29
SDCBP-204ENST00000447182 GPR84Q9NQS5 396 aa16.86■□□□□ 0.29
SDCBP-204ENST00000447182 OSGIN2Q9Y236 505 aa16.86■□□□□ 0.29
SDCBP-204ENST00000447182 EFNA2O43921 213 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 RAB13P51153 203 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 ZNF121P58317 390 aaPredicted RBP16.85■□□□□ 0.29
SDCBP-204ENST00000447182 CLRN1P58418 232 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 HNRNPKP61978 463 aaKnown RBP eCLIP16.85■□□□□ 0.29
SDCBP-204ENST00000447182 EIF5AP63241 154 aaKnown RBP16.85■□□□□ 0.29
SDCBP-204ENST00000447182 EIF3IQ13347 325 aaKnown RBP16.85■□□□□ 0.29
SDCBP-204ENST00000447182 SYT13Q7L8C5 426 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 POC1AQ8NBT0 407 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 BHLHE23Q8NDY6 225 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 OR13G1Q8NGZ3 307 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 WNT2BQ93097 391 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 OR10C1Q96KK4 312 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 MRGPRX4Q96LA9 322 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 NUDT22Q9BRQ3 303 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 SOX7Q9BT81 388 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 TGIF2Q9GZN2 237 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 ACKR4Q9NPB9 350 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 POLR1DQ9Y2S0 133 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 WIF1Q9Y5W5 379 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 ADAMTS9Q9P2N4 1935 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 IGHV3-20A0A0C4DH32 117 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 FIGNL2A6NMB9 653 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 TAAR5O14804 337 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 MBTPS2O43462 519 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 IGHG1P01857 330 aa16.85■□□□□ 0.29
SDCBP-204ENST00000447182 RPS2P15880 293 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms