RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 KCNN3Q9UGI6 736 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 ZNF222Q9UK12 451 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 PIGLQ9Y2B2 252 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 MRPS28Q9Y2Q9 187 aaKnown RBP8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 RHBDD3Q9Y3P4 386 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 TIMM10BQ9Y5J6 103 aa8.34□□□□□ -1.07
COL6A4P1-201ENST00000446690 TMEM235A6NFC5 223 aa8.34□□□□□ -1.08
COL6A4P1-201ENST00000446690 CDK2AP1O14519 115 aa8.34□□□□□ -1.08
COL6A4P1-201ENST00000446690 ARPC1BO15143 372 aaKnown RBP8.34□□□□□ -1.08
COL6A4P1-201ENST00000446690 SYNGR3O43761 229 aa8.34□□□□□ -1.08
COL6A4P1-201ENST00000446690 DHRS3O75911 302 aa8.34□□□□□ -1.08
COL6A4P1-201ENST00000446690 TPPPO94811 219 aa8.34□□□□□ -1.08
COL6A4P1-201ENST00000446690 CSF1P09603 554 aa8.34□□□□□ -1.08
COL6A4P1-201ENST00000446690 WT1P19544 449 aaPredicted RBP8.34□□□□□ -1.08
COL6A4P1-201ENST00000446690 CCL1P22362 96 aa8.34□□□□□ -1.08
COL6A4P1-201ENST00000446690 FAUP35544 74 aaKnown RBP8.34□□□□□ -1.08
COL6A4P1-201ENST00000446690 PMP22Q01453 160 aa8.34□□□□□ -1.08
COL6A4P1-201ENST00000446690 UNC119Q13432 240 aa8.34□□□□□ -1.08
COL6A4P1-201ENST00000446690 LINC00303Q3SY05 128 aa8.34□□□□□ -1.08
COL6A4P1-201ENST00000446690 RIPPLY2Q5TAB7 128 aa8.34□□□□□ -1.08
COL6A4P1-201ENST00000446690 ZNF529Q6P280 563 aa8.34□□□□□ -1.08
COL6A4P1-201ENST00000446690 MCEMP1Q8IX19 187 aa8.34□□□□□ -1.08
COL6A4P1-201ENST00000446690 OR5AS1Q8N127 324 aa8.34□□□□□ -1.08
COL6A4P1-201ENST00000446690 SGK3Q96BR1 496 aa8.34□□□□□ -1.08
COL6A4P1-201ENST00000446690 SCMH1Q96GD3 660 aa8.34□□□□□ -1.08
COL6A4P1-201ENST00000446690 ACTR6Q9GZN1 396 aa8.34□□□□□ -1.08
COL6A4P1-201ENST00000446690 SLC7A10Q9NS82 523 aa8.34□□□□□ -1.08
COL6A4P1-201ENST00000446690 PARPBPQ9NWS1 579 aa8.34□□□□□ -1.08
COL6A4P1-201ENST00000446690 TAS2R8Q9NYW2 309 aa8.34□□□□□ -1.08
COL6A4P1-201ENST00000446690 EMC3Q9P0I2 261 aa8.34□□□□□ -1.08
COL6A4P1-201ENST00000446690 UPB1Q9UBR1 384 aa8.34□□□□□ -1.08
COL6A4P1-201ENST00000446690 EP300Q09472 2414 aaPredicted RBP8.33□□□□□ -1.08
COL6A4P1-201ENST00000446690 IGKV1-9A0A0C4DH69 117 aa8.33□□□□□ -1.08
COL6A4P1-201ENST00000446690 A0A0U1RQV5 110 aa8.33□□□□□ -1.08
COL6A4P1-201ENST00000446690 ZNHIT1O43257 154 aa8.33□□□□□ -1.08
COL6A4P1-201ENST00000446690 SSNA1O43805 119 aa8.33□□□□□ -1.08
COL6A4P1-201ENST00000446690 ZNF780AO75290 641 aaPredicted RBP8.33□□□□□ -1.08
COL6A4P1-201ENST00000446690 MTRF1O75570 445 aaKnown RBP8.33□□□□□ -1.08
COL6A4P1-201ENST00000446690 FARS2O95363 451 aaKnown RBP8.33□□□□□ -1.08
COL6A4P1-201ENST00000446690 BPNT1O95861 308 aa8.33□□□□□ -1.08
COL6A4P1-201ENST00000446690 CD3DP04234 171 aa8.33□□□□□ -1.08
COL6A4P1-201ENST00000446690 STOMP27105 288 aa8.33□□□□□ -1.08
COL6A4P1-201ENST00000446690 NOVA1P51513 510 aaKnown RBP8.33□□□□□ -1.08
COL6A4P1-201ENST00000446690 CAPZA1P52907 286 aa8.33□□□□□ -1.08
COL6A4P1-201ENST00000446690 ST3GAL2Q16842 350 aa8.33□□□□□ -1.08
COL6A4P1-201ENST00000446690 RNFT1Q5M7Z0 435 aa8.33□□□□□ -1.08
COL6A4P1-201ENST00000446690 DNM1P46Q6ZS02 220 aa8.33□□□□□ -1.08
COL6A4P1-201ENST00000446690 ZFP62Q8NB50 900 aaPredicted RBP8.33□□□□□ -1.08
COL6A4P1-201ENST00000446690 TMEM178AQ8NBL3 297 aa8.33□□□□□ -1.08
COL6A4P1-201ENST00000446690 OR4C16Q8NGL9 310 aa8.33□□□□□ -1.08
COL6A4P1-201ENST00000446690 SEH1LQ96EE3 360 aa8.33□□□□□ -1.08
COL6A4P1-201ENST00000446690 OR2H1Q9GZK4 316 aa8.33□□□□□ -1.08
COL6A4P1-201ENST00000446690 GHITMQ9H3K2 345 aa8.33□□□□□ -1.08
COL6A4P1-201ENST00000446690 BANF2Q9H503 90 aa8.33□□□□□ -1.08
COL6A4P1-201ENST00000446690 SPEF1Q9Y4P9 236 aa8.33□□□□□ -1.08
COL6A4P1-201ENST00000446690 IGKV3D-15A0A087WSY6 115 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 TRGV5A0A0B4J1U4 118 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 B8ZZF3 427 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 PEX14O75381 377 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 MPIG6BO95866 241 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 LPLP06858 475 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 GNB3P16520 340 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 ANXA7P20073 488 aaKnown RBP8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 RAB6AP20340 208 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 CCNOP22674 350 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 OTX1P32242 354 aaPredicted RBP8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 PCBD1P61457 104 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 ARF1P84077 181 aaKnown RBP8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 HGFACQ04756 655 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 ECH1Q13011 328 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 MAB21L1Q13394 359 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 UBE2V2Q15819 145 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 CDNFQ49AH0 187 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 SLC22A6Q4U2R8 563 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 OLFML2AQ68BL7 652 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 DRAM2Q6UX65 266 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 Q6ZTK2 550 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 OR52H1Q8NGJ2 320 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 ZFAND1Q8TCF1 268 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 GPX8Q8TED1 209 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 SNAPC3Q92966 411 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 PIGTQ969N2 578 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 PTX4Q96A99 478 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 TMEM45BQ96B21 275 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 MS4A3Q96HJ5 214 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 REEP6Q96HR9 211 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 WNT5BQ9H1J7 359 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 ING4Q9UNL4 249 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 V9GYS6 101 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 A0A1W2PP11 408 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 C7orf66A4D0T2 115 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 ZNF587BE7ETH6 402 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 CRTAPO75718 401 aaPredicted RBP8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 ACTL6AO96019 429 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 HPXP02790 462 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 CSN2P05814 226 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 AKAIN1P0CW23 69 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 FCGR2AP12318 317 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 CRYGSP22914 178 aa8.32□□□□□ -1.08
COL6A4P1-201ENST00000446690 RAD52P43351 418 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms