RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 PCMT1P22061 227 aa14.74□□□□□ -0.05
LIME1-202ENST00000444951 PSMB9P28065 219 aa14.74□□□□□ -0.05
LIME1-202ENST00000444951 APOBEC3AP31941 199 aaPredicted RBP14.74□□□□□ -0.05
LIME1-202ENST00000444951 SERPINF1P36955 418 aa14.74□□□□□ -0.05
LIME1-202ENST00000444951 KLF3P57682 345 aaPredicted RBP14.74□□□□□ -0.05
LIME1-202ENST00000444951 TAS2R43P59537 309 aa14.74□□□□□ -0.05
LIME1-202ENST00000444951 SHEQ5VZ18 495 aa14.74□□□□□ -0.05
LIME1-202ENST00000444951 OR2T2Q6IF00 324 aa14.74□□□□□ -0.05
LIME1-202ENST00000444951 FDX2Q6P4F2 183 aa14.74□□□□□ -0.05
LIME1-202ENST00000444951 EGFL6Q8IUX8 553 aa14.74□□□□□ -0.05
LIME1-202ENST00000444951 FBXL14Q8N1E6 418 aa14.74□□□□□ -0.05
LIME1-202ENST00000444951 OR5AK2Q8NH90 309 aa14.74□□□□□ -0.05
LIME1-202ENST00000444951 MRPL24Q96A35 216 aaKnown RBP14.74□□□□□ -0.05
LIME1-202ENST00000444951 COMMD4Q9H0A8 199 aa14.74□□□□□ -0.05
LIME1-202ENST00000444951 PLK3Q9H4B4 646 aa14.74□□□□□ -0.05
LIME1-202ENST00000444951 ZNF442Q9H7R0 627 aa14.74□□□□□ -0.05
LIME1-202ENST00000444951 MYEF2Q9P2K5 600 aaKnown RBP14.74□□□□□ -0.05
LIME1-202ENST00000444951 USF3Q68DE3 2245 aa14.73□□□□□ -0.05
LIME1-202ENST00000444951 A0A0U1RQV5 110 aa14.73□□□□□ -0.05
LIME1-202ENST00000444951 LOC107986453A0A1B0GWG9 222 aa14.73□□□□□ -0.05
LIME1-202ENST00000444951 MAGEA13PA6NCF6 341 aa14.73□□□□□ -0.05
LIME1-202ENST00000444951 OGG1O15527 345 aa14.73□□□□□ -0.05
LIME1-202ENST00000444951 INMTO95050 263 aa14.73□□□□□ -0.05
LIME1-202ENST00000444951 ZFPL1O95159 310 aa14.73□□□□□ -0.05
LIME1-202ENST00000444951 CCR9P51686 369 aa14.73□□□□□ -0.05
LIME1-202ENST00000444951 SELENOVP59797 346 aa14.73□□□□□ -0.05
LIME1-202ENST00000444951 PSG7Q13046 419 aa14.73□□□□□ -0.05
LIME1-202ENST00000444951 CCDC58Q4VC31 144 aa14.73□□□□□ -0.05
LIME1-202ENST00000444951 MBNL2Q5VZF2 373 aaKnown RBP14.73□□□□□ -0.05
LIME1-202ENST00000444951 CLEC9AQ6UXN8 241 aa14.73□□□□□ -0.05
LIME1-202ENST00000444951 FBXW12Q6X9E4 464 aa14.73□□□□□ -0.05
LIME1-202ENST00000444951 C1orf174Q8IYL3 243 aa14.73□□□□□ -0.05
LIME1-202ENST00000444951 HAVCR2Q8TDQ0 301 aa14.73□□□□□ -0.05
LIME1-202ENST00000444951 MGLLQ99685 303 aa14.73□□□□□ -0.05
LIME1-202ENST00000444951 TAAR3PQ9P1P4 343 aa14.73□□□□□ -0.05
LIME1-202ENST00000444951 CSPG4Q6UVK1 2322 aa14.73□□□□□ -0.05
LIME1-202ENST00000444951 TMEM212A6NML5 194 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 SYT7O43581 403 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 UBCP0CG48 685 aaKnown RBP14.72□□□□□ -0.05
LIME1-202ENST00000444951 RAC2P15153 192 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 ZNF250P15622 560 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 TUBG1P23258 451 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 CFL1P23528 166 aaKnown RBP14.72□□□□□ -0.05
LIME1-202ENST00000444951 TTKP33981 857 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 GSK3AP49840 483 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 FAM3AP98173 230 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 TSTQ16762 297 aaKnown RBP14.72□□□□□ -0.05
LIME1-202ENST00000444951 NKPD1Q17RQ9 610 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 ARMCX4Q5H9R4 360 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 TMEM255AQ5JRV8 349 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 TMEM244Q5VVB8 128 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 UBE2UQ5VVX9 321 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 LIPKQ5VXJ0 399 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 DMKNQ6E0U4 476 aaPredicted RBP14.72□□□□□ -0.05
LIME1-202ENST00000444951 MUC15Q8N387 334 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 OR56B2PQ8NGI1 322 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 OR10AC1Q8NH08 325 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 GHSRQ92847 366 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 UFD1Q92890 307 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 SPSB4Q96A44 273 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 HAVCR1Q96D42 359 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 SMIM19Q96E16 107 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 PERPQ96FX8 193 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 OPALINQ96PE5 141 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 REPIN1Q9BWE0 567 aaKnown RBP14.72□□□□□ -0.05
LIME1-202ENST00000444951 RGCCQ9H4X1 137 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 VCX3AQ9NNX9 186 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 TUBG2Q9NRH3 451 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 PURGQ9UJV8 347 aaKnown RBP14.72□□□□□ -0.05
LIME1-202ENST00000444951 JMJD1CQ15652 2540 aa14.72□□□□□ -0.05
LIME1-202ENST00000444951 A0A1B0GTI1 187 aa14.71□□□□□ -0.05
LIME1-202ENST00000444951 hCG_38984A0A1B0GV85 526 aa14.71□□□□□ -0.05
LIME1-202ENST00000444951 A6NIN4 97 aa14.71□□□□□ -0.05
LIME1-202ENST00000444951 H7C1Q1 480 aa14.71□□□□□ -0.05
LIME1-202ENST00000444951 LMX1BO60663 402 aa14.71□□□□□ -0.05
LIME1-202ENST00000444951 LY6G6DO95868 133 aa14.71□□□□□ -0.05
LIME1-202ENST00000444951 SMIM18P0DKX4 95 aa14.71□□□□□ -0.05
LIME1-202ENST00000444951 ALDH3B1P43353 468 aa14.71□□□□□ -0.05
LIME1-202ENST00000444951 ACSM1Q08AH1 577 aa14.71□□□□□ -0.05
LIME1-202ENST00000444951 MLLT11Q13015 90 aaPredicted RBP14.71□□□□□ -0.05
LIME1-202ENST00000444951 DOK3Q7L591 496 aa14.71□□□□□ -0.05
LIME1-202ENST00000444951 OR13C5Q8NGS8 318 aa14.71□□□□□ -0.05
LIME1-202ENST00000444951 TSEN15Q8WW01 171 aaKnown RBP14.71□□□□□ -0.05
LIME1-202ENST00000444951 FCGR1BQ92637 280 aa14.71□□□□□ -0.05
LIME1-202ENST00000444951 GTF3AQ92664 365 aaKnown RBP14.71□□□□□ -0.05
LIME1-202ENST00000444951 COX4I2Q96KJ9 171 aa14.71□□□□□ -0.05
LIME1-202ENST00000444951 Q96MF0 132 aa14.71□□□□□ -0.05
LIME1-202ENST00000444951 CCL19Q99731 98 aa14.71□□□□□ -0.05
LIME1-202ENST00000444951 TMED9Q9BVK6 235 aa14.71□□□□□ -0.05
LIME1-202ENST00000444951 OPA3Q9H6K4 179 aa14.71□□□□□ -0.05
LIME1-202ENST00000444951 FAIMQ9NVQ4 179 aa14.71□□□□□ -0.05
LIME1-202ENST00000444951 LAMP3Q9UQV4 416 aa14.71□□□□□ -0.05
LIME1-202ENST00000444951 TRIM64BA6NI03 449 aa14.7□□□□□ -0.06
LIME1-202ENST00000444951 CD300LBA8K4G0 201 aa14.7□□□□□ -0.06
LIME1-202ENST00000444951 H3BSA7 217 aa14.7□□□□□ -0.06
LIME1-202ENST00000444951 LILRA1O75019 489 aa14.7□□□□□ -0.06
LIME1-202ENST00000444951 HEXAP06865 529 aa14.7□□□□□ -0.06
LIME1-202ENST00000444951 SOD3P08294 240 aa14.7□□□□□ -0.06
LIME1-202ENST00000444951 SELEP16581 610 aa14.7□□□□□ -0.06
LIME1-202ENST00000444951 ACHEP22303 614 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms