RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 SFRP4Q6FHJ7 346 aaPredicted RBP13.7□□□□□ -0.22
SNX13-204ENST00000444712 GLIPR1L1Q6UWM5 242 aa13.7□□□□□ -0.22
SNX13-204ENST00000444712 DPPA2Q7Z7J5 298 aa13.7□□□□□ -0.22
SNX13-204ENST00000444712 ZNF100Q8IYN0 542 aa13.7□□□□□ -0.22
SNX13-204ENST00000444712 TMEM229BQ8NBD8 167 aa13.7□□□□□ -0.22
SNX13-204ENST00000444712 AKR7LQ8NHP1 331 aa13.7□□□□□ -0.22
SNX13-204ENST00000444712 ITFG2Q969R8 447 aa13.7□□□□□ -0.22
SNX13-204ENST00000444712 SGK3Q96BR1 496 aa13.7□□□□□ -0.22
SNX13-204ENST00000444712 REEP6Q96HR9 211 aa13.7□□□□□ -0.22
SNX13-204ENST00000444712 TRAF4Q9BUZ4 470 aaPredicted RBP13.7□□□□□ -0.22
SNX13-204ENST00000444712 CST11Q9H112 138 aa13.7□□□□□ -0.22
SNX13-204ENST00000444712 GHITMQ9H3K2 345 aa13.7□□□□□ -0.22
SNX13-204ENST00000444712 ARF1P84077 181 aaKnown RBP13.69□□□□□ -0.22
SNX13-204ENST00000444712 CD83Q01151 205 aa13.69□□□□□ -0.22
SNX13-204ENST00000444712 RIPPLY1Q0D2K3 151 aa13.69□□□□□ -0.22
SNX13-204ENST00000444712 MAB21L1Q13394 359 aa13.69□□□□□ -0.22
SNX13-204ENST00000444712 UNC119Q13432 240 aa13.69□□□□□ -0.22
SNX13-204ENST00000444712 CNN3Q15417 329 aaKnown RBP13.69□□□□□ -0.22
SNX13-204ENST00000444712 RBMS2Q15434 407 aaKnown RBP13.69□□□□□ -0.22
SNX13-204ENST00000444712 GSG1Q2KHT4 349 aa13.69□□□□□ -0.22
SNX13-204ENST00000444712 SNAI3Q3KNW1 292 aa13.69□□□□□ -0.22
SNX13-204ENST00000444712 OR10K2Q6IF99 312 aa13.69□□□□□ -0.22
SNX13-204ENST00000444712 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.69□□□□□ -0.22
SNX13-204ENST00000444712 PAQR4Q8N4S7 273 aaPredicted RBP13.69□□□□□ -0.22
SNX13-204ENST00000444712 SPSB1Q96BD6 273 aa13.69□□□□□ -0.22
SNX13-204ENST00000444712 SEH1LQ96EE3 360 aa13.69□□□□□ -0.22
SNX13-204ENST00000444712 URM1Q9BTM9 101 aaKnown RBP13.69□□□□□ -0.22
SNX13-204ENST00000444712 OR51J1Q9H342 316 aa13.69□□□□□ -0.22
SNX13-204ENST00000444712 RANGRFQ9HD47 186 aaPredicted RBP13.69□□□□□ -0.22
SNX13-204ENST00000444712 GLRX2Q9NS18 164 aa13.69□□□□□ -0.22
SNX13-204ENST00000444712 PAIP2BQ9ULR5 123 aaKnown RBP13.69□□□□□ -0.22
SNX13-204ENST00000444712 SLC22A20A6NK97 555 aa13.69□□□□□ -0.22
SNX13-204ENST00000444712 RAB27BO00194 218 aa13.69□□□□□ -0.22
SNX13-204ENST00000444712 NDUFB6O95139 128 aa13.69□□□□□ -0.22
SNX13-204ENST00000444712 IGHG3P01860 377 aa13.69□□□□□ -0.22
SNX13-204ENST00000444712 CLN3Q13286 438 aa13.69□□□□□ -0.22
SNX13-204ENST00000444712 SFRP5Q5T4F7 317 aa13.69□□□□□ -0.22
SNX13-204ENST00000444712 METTL11BQ5VVY1 283 aa13.69□□□□□ -0.22
SNX13-204ENST00000444712 ZNF782Q6ZMW2 699 aaPredicted RBP13.69□□□□□ -0.22
SNX13-204ENST00000444712 ACBD4Q8NC06 268 aa13.69□□□□□ -0.22
SNX13-204ENST00000444712 GIMAP1Q8WWP7 306 aa13.69□□□□□ -0.22
SNX13-204ENST00000444712 AQP3Q92482 292 aa13.69□□□□□ -0.22
SNX13-204ENST00000444712 PRDM14Q9GZV8 571 aa13.69□□□□□ -0.22
SNX13-204ENST00000444712 IGKV1-9A0A0C4DH69 117 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 A0A1B0GUH1 482 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 TGM6O95932 706 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 CYB5AP00167 134 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 MELTFP08582 738 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 FAHP16930 419 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 ANOS1P23352 680 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 ARR3P36575 388 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 GUCA2AQ02747 115 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 SRSF6Q13247 344 aaKnown RBP13.68□□□□□ -0.22
SNX13-204ENST00000444712 KISS1Q15726 138 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 KCNJ8Q15842 424 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 ZNF260Q3ZCT1 412 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 PABPC1L2AQ5JQF8 200 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 STEAP1BQ6NZ63 245 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 Q6ZTK2 550 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 OR4C16Q8NGL9 310 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 OR10R2Q8NGX6 335 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 TECTBQ96PL2 329 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 S100A13Q99584 98 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 TMEM59Q9BXS4 323 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 NOX3Q9HBY0 568 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 ZNF224Q9NZL3 707 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 SPRR3Q9UBC9 169 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 C5orf63A6NC05 138 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 A8MV72 311 aaPredicted RBP13.68□□□□□ -0.22
SNX13-204ENST00000444712 CEACAM4O75871 244 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 IGHV3-9P01782 118 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 PRKACBP22694 351 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 OR3A4PP47883 348 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 MECP2P51608 486 aaKnown RBP13.68□□□□□ -0.22
SNX13-204ENST00000444712 LINC00303Q3SY05 128 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 TMEM255AQ5JRV8 349 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 TMEM53Q6P2H8 277 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 NOXA1Q86UR1 476 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 CHST4Q8NCG5 386 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 OR56B1Q8NGI3 324 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 DACT3Q96B18 629 aaPredicted RBP13.68□□□□□ -0.22
SNX13-204ENST00000444712 ZNF486Q96H40 463 aaPredicted RBP13.68□□□□□ -0.22
SNX13-204ENST00000444712 MED30Q96HR3 178 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 GPN1Q9HCN4 374 aaPredicted RBP13.68□□□□□ -0.22
SNX13-204ENST00000444712 DLL3Q9NYJ7 618 aa13.68□□□□□ -0.22
SNX13-204ENST00000444712 MYEF2Q9P2K5 600 aaKnown RBP13.68□□□□□ -0.22
SNX13-204ENST00000444712 CDC14BO60729 498 aa13.67□□□□□ -0.22
SNX13-204ENST00000444712 GSTP1P09211 210 aaKnown RBP13.67□□□□□ -0.22
SNX13-204ENST00000444712 PATE4P0C8F1 98 aa13.67□□□□□ -0.22
SNX13-204ENST00000444712 WT1P19544 449 aaPredicted RBP13.67□□□□□ -0.22
SNX13-204ENST00000444712 CAMK2BQ13554 666 aa13.67□□□□□ -0.22
SNX13-204ENST00000444712 C3AR1Q16581 482 aa13.67□□□□□ -0.22
SNX13-204ENST00000444712 DEFB109BQ30KR1 87 aa13.67□□□□□ -0.22
SNX13-204ENST00000444712 MOGAT2Q3SYC2 334 aa13.67□□□□□ -0.22
SNX13-204ENST00000444712 RNFT1Q5M7Z0 435 aa13.67□□□□□ -0.22
SNX13-204ENST00000444712 ZBTB37Q5TC79 503 aa13.67□□□□□ -0.22
SNX13-204ENST00000444712 ZNF584Q8IVC4 421 aa13.67□□□□□ -0.22
SNX13-204ENST00000444712 GABRG1Q8N1C3 465 aa13.67□□□□□ -0.22
SNX13-204ENST00000444712 STEAP2Q8NFT2 490 aa13.67□□□□□ -0.22
SNX13-204ENST00000444712 SPACA5Q96QH8 159 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms