RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 TMEM106CQ9BVX2 250 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 PTX4Q96A99 478 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 C5orf66Q9H5L9 145 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 CREBZFQ9NS37 354 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 DOCK3Q8IZD9 2030 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 MARCH11A6NNE9 402 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 FAM3AP98173 230 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 RAB32Q13637 225 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 SEMA6DQ8NFY4 1073 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 HLA-CQ95604 372 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 LPAR4Q99677 370 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 PIAS3Q9Y6X2 628 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 SOX1O00570 391 aaPredicted RBP4.5□□□□□ -1.69
HERC1-201ENST00000443617 DVL1O14640 695 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 XRCC2O43543 280 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 AKT2P31751 481 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 EMDP50402 254 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 OGFOD3Q6PK18 319 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 PLXDC2Q6UX71 529 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 OR10A7Q8NGE5 316 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 RNF128Q8TEB7 428 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 GAL3ST4Q96RP7 486 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 SERINC2Q96SA4 455 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 R4GMQ9 66 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 OR5H8P0DN80 308 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 KIR3DL2P43630 455 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 ALKBH2Q6NS38 261 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 IRF7Q92985 503 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 LRIT1Q9P2V4 623 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 UBE2J1Q9Y385 318 aaPredicted RBP4.5□□□□□ -1.69
HERC1-201ENST00000443617 HKR1P10072 659 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 EDN3P14138 238 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 HLA-DQA1Q5Y7H0 255 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 TCEAL8Q8IYN2 117 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 PAQR4Q8N4S7 273 aaPredicted RBP4.5□□□□□ -1.69
HERC1-201ENST00000443617 HIST1H2BLQ99880 126 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 URM1Q9BTM9 101 aaKnown RBP4.5□□□□□ -1.69
HERC1-201ENST00000443617 FBXO34Q9NWN3 711 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 LOC107986453A0A1B0GWG9 222 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 C20orf202A1L168 122 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 FGF19O95750 216 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 JMJD7P0C870 316 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 KLK2P20151 261 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 CD82P27701 267 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 TMEM182Q6ZP80 229 aaPredicted RBP4.5□□□□□ -1.69
HERC1-201ENST00000443617 ERN2Q76MJ5 926 aaKnown RBP4.5□□□□□ -1.69
HERC1-201ENST00000443617 OR13D1Q8NGV5 346 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 PRDM7Q9NQW5 492 aa4.5□□□□□ -1.69
HERC1-201ENST00000443617 A0A087WUJ7 227 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 A0A087WWC5 75 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 HIDE1A8MVS5 230 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 UPK3AO75631 287 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 IFNA1P01562 189 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 HSD11B1P28845 292 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 RPL18Q07020 188 aaKnown RBP4.49□□□□□ -1.69
HERC1-201ENST00000443617 STPG1Q5TH74 334 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 PPP5D1E7EU14 171 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 DEFB115Q30KQ5 88 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 WSB1Q9Y6I7 421 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 B4DEV8 164 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 RNH1P13489 461 aaKnown RBP4.49□□□□□ -1.69
HERC1-201ENST00000443617 SFTPDP35247 375 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 HERV-K104P61576 105 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 TLE4Q04727 773 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 POMZP3Q6PJE2 187 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 GATSQ8NAP1 163 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 OR52N4Q8NGI2 321 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 GBF1Q92538 1859 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 DOK2O60496 412 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 DIRAS3O95661 229 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 OR3A1P47881 315 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 COL5A1-AS1Q5SY13 56 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 VN1R2Q8NFZ6 395 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 SNU13P55769 128 aaKnown RBP4.49□□□□□ -1.69
HERC1-201ENST00000443617 VAX1Q5SQQ9 334 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 TMEM184AQ6ZMB5 413 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 OTOSQ8NHW6 89 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 MS4A10Q96PG2 267 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 A0A1W2PPC1 479 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 MSGN1A6NI15 193 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 HSPB2A8KAH6 182 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 HSPB2Q16082 182 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 DMRTA1Q5VZB9 504 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 KIRREL2Q6UWL6 708 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 COX15Q7KZN9 410 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 GNG13Q9P2W3 67 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 PLRG1O43660 514 aaKnown RBP4.49□□□□□ -1.69
HERC1-201ENST00000443617 GCGP01275 180 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 ZNF728P0DKX0 622 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 ASCL1P50553 236 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 LDLRAD1Q5T700 205 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 DNM1P34Q6PK57 102 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 BEND2Q8NDZ0 799 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 OR10G6Q8NH81 332 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 SLC7A11Q9UPY5 501 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 CENPVL1A0A0U1RR11 272 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 H7BYZ3 331 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 P2RY10O00398 339 aa4.49□□□□□ -1.69
HERC1-201ENST00000443617 DDNO94850 711 aaPredicted RBP4.49□□□□□ -1.69
HERC1-201ENST00000443617 ABLIM3O94929 683 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms