RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 RAB8BQ92930 207 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 CMTM7Q96FZ5 175 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 ATXN7L3BQ96GX2 97 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 ZNF488Q96MN9 340 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 ATF6BQ99941 703 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 CDCA4Q9BXL8 241 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 UGT2B28Q9BY64 529 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 CHIAQ9BZP6 476 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 IL17CQ9P0M4 197 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 Q9UF83 564 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 MMP17Q9ULZ9 603 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 ERGIC3Q9Y282 383 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 L3MBTL1Q9Y468 752 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 ZFYVE9O95405 1425 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 USP6P35125 1406 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 CROCCQ5TZA2 2017 aa3.66□□□□□ -1.82
VPS50-206ENST00000443443 ZNF816-ZNF321PA0A0X1KG74 233 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 A0A1W2PPR1 153 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 VPS37CA5D8V6 355 aaPredicted RBP3.65□□□□□ -1.83
VPS50-206ENST00000443443 B4DXG7 233 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 E9PAM4 449 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 ZNF593O00488 134 aaPredicted RBP3.65□□□□□ -1.83
VPS50-206ENST00000443443 CDIPTO14735 213 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 ERI3O43414 337 aaKnown RBP3.65□□□□□ -1.83
VPS50-206ENST00000443443 FADS1O60427 444 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 RAD1O60671 282 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 PTTG1O95997 202 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 FCGR3AP08637 254 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 OR9G9P0C7N8 305 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 HSD17B1P14061 328 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 HTR1DP28221 377 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 SSTR5P35346 364 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 HRH1P35367 487 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 PTGDSP41222 190 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 EFNA3P52797 238 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 DLX6P56179 175 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 AP1S2P56377 157 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 PRPSAP1Q14558 356 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 POU6F1Q14863 301 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 CCDC153Q494R4 210 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 ZNF658BQ4V348 819 aaPredicted RBP3.65□□□□□ -1.83
VPS50-206ENST00000443443 MS4A13Q5J8X5 152 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 ACER2Q5QJU3 275 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 SAXO2Q658L1 398 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 FAM19A1Q7Z5A9 133 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 LYG2Q86SG7 212 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 C10orf107Q8IVU9 208 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 FBXO16Q8IX29 292 aaPredicted RBP3.65□□□□□ -1.83
VPS50-206ENST00000443443 C11orf53Q8IXP5 236 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 BLIDQ8IZY5 108 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 LGI3Q8N145 548 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 STK40Q8N2I9 435 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 SVOPLQ8N434 492 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 OR1M1Q8NGA1 313 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 OR11L1Q8NGX0 322 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 FNDC8Q8TC99 324 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 FGF11Q92914 225 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 PAGE5Q96GU1 130 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 TMEM80Q96HE8 168 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 TMEM56Q96MV1 263 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 ZNF681Q96N22 645 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 PDCD1LG2Q9BQ51 273 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 ACTR6Q9GZN1 396 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 TLNRD1Q9H1K6 362 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 REEP1Q9H902 201 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 PARVBQ9HBI1 364 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 EXOSC4Q9NPD3 245 aaKnown RBP3.65□□□□□ -1.83
VPS50-206ENST00000443443 SLC2A6Q9UGQ3 507 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 CES1P1Q9UKY3 287 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 PSG11Q9UQ72 335 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 SNX10Q9Y5X0 201 aa3.65□□□□□ -1.83
VPS50-206ENST00000443443 COL22A1Q8NFW1 1626 aaPredicted RBP3.65□□□□□ -1.83
VPS50-206ENST00000443443 CPDO75976 1380 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 FLT4P35916 1363 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 SMARCA2P51531 1590 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 NME4O00746 187 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 MBTPS2O43462 519 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 RAD51CO43502 376 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 SYNGR1O43759 233 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 EIF3GO75821 320 aaKnown RBP eCLIP3.64□□□□□ -1.83
VPS50-206ENST00000443443 OXTP01178 125 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 MT-ND4P03905 459 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 KLK3P07288 261 aaPredicted RBP3.64□□□□□ -1.83
VPS50-206ENST00000443443 HOXC4P09017 264 aaPredicted RBP3.64□□□□□ -1.83
VPS50-206ENST00000443443 WNT2P09544 360 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 OR5AL1P0C617 328 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 DNAH10OSP0CZ25 163 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 HIST1H1EP10412 219 aaKnown RBP3.64□□□□□ -1.83
VPS50-206ENST00000443443 S100A1P23297 94 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 RPS12P25398 132 aaKnown RBP3.64□□□□□ -1.83
VPS50-206ENST00000443443 GDF1P27539 372 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 CRABP2P29373 138 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 SUB1P53999 127 aaKnown RBP eCLIP3.64□□□□□ -1.83
VPS50-206ENST00000443443 MRPS11P82912 194 aaKnown RBP3.64□□□□□ -1.83
VPS50-206ENST00000443443 TNFRSF9Q07011 255 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 CD300CQ08708 224 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 SLC10A7Q0GE19 358 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 IL18R1Q13478 541 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 HIGD2BQ4VC39 106 aa3.64□□□□□ -1.83
VPS50-206ENST00000443443 CST9Q5W186 159 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms