RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 A6NLC8 198 aa11.71□□□□□ -0.53
HMGN1-208ENST00000443046 K7EIL1 84 aa11.71□□□□□ -0.53
HMGN1-208ENST00000443046 M0R1W7 72 aa11.71□□□□□ -0.53
HMGN1-208ENST00000443046 BHLHE40O14503 412 aa11.71□□□□□ -0.53
HMGN1-208ENST00000443046 CD28P10747 220 aa11.71□□□□□ -0.53
HMGN1-208ENST00000443046 RPS6KA3P51812 740 aa11.71□□□□□ -0.53
HMGN1-208ENST00000443046 SLC36A3Q495N2 470 aa11.71□□□□□ -0.53
HMGN1-208ENST00000443046 GLYATL3Q5SZD4 288 aa11.71□□□□□ -0.53
HMGN1-208ENST00000443046 METTL21CQ5VZV1 264 aa11.71□□□□□ -0.53
HMGN1-208ENST00000443046 NCR3LG1Q68D85 454 aa11.71□□□□□ -0.53
HMGN1-208ENST00000443046 STUMQ69YW2 141 aa11.71□□□□□ -0.53
HMGN1-208ENST00000443046 WDR82Q6UXN9 313 aa11.71□□□□□ -0.53
HMGN1-208ENST00000443046 NDUFA11Q86Y39 141 aa11.71□□□□□ -0.53
HMGN1-208ENST00000443046 OR2T12Q8NG77 320 aa11.71□□□□□ -0.53
HMGN1-208ENST00000443046 OR2AJ1Q8NGZ0 328 aa11.71□□□□□ -0.53
HMGN1-208ENST00000443046 PIFOQ8TCI5 191 aa11.71□□□□□ -0.53
HMGN1-208ENST00000443046 LRRC29Q8WV35 223 aa11.71□□□□□ -0.53
HMGN1-208ENST00000443046 SEH1LQ96EE3 360 aa11.71□□□□□ -0.53
HMGN1-208ENST00000443046 RSRC1Q96IZ7 334 aaKnown RBP11.71□□□□□ -0.53
HMGN1-208ENST00000443046 FAM234AQ9H0X4 552 aa11.71□□□□□ -0.53
HMGN1-208ENST00000443046 METTL8Q9H825 291 aaKnown RBP11.71□□□□□ -0.53
HMGN1-208ENST00000443046 RAB18Q9NP72 206 aa11.71□□□□□ -0.53
HMGN1-208ENST00000443046 SERTAD4Q9NUC0 356 aa11.71□□□□□ -0.53
HMGN1-208ENST00000443046 MRPL22Q9NWU5 206 aaKnown RBP11.71□□□□□ -0.53
HMGN1-208ENST00000443046 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.7□□□□□ -0.54
HMGN1-208ENST00000443046 A0A1W2PRQ8 180 aa11.7□□□□□ -0.54
HMGN1-208ENST00000443046 NDUFB3O43676 98 aa11.7□□□□□ -0.54
HMGN1-208ENST00000443046 CHST1O43916 411 aa11.7□□□□□ -0.54
HMGN1-208ENST00000443046 FBXO24O75426 580 aa11.7□□□□□ -0.54
HMGN1-208ENST00000443046 VSIG10L2P0DP72 767 aa11.7□□□□□ -0.54
HMGN1-208ENST00000443046 SELLP14151 372 aa11.7□□□□□ -0.54
HMGN1-208ENST00000443046 GRK5P34947 590 aa11.7□□□□□ -0.54
HMGN1-208ENST00000443046 DGCR6Q14129 220 aa11.7□□□□□ -0.54
HMGN1-208ENST00000443046 LY6EQ16553 131 aa11.7□□□□□ -0.54
HMGN1-208ENST00000443046 NSUN5P1Q3KNT7 163 aa11.7□□□□□ -0.54
HMGN1-208ENST00000443046 RRM2BQ7LG56 351 aa11.7□□□□□ -0.54
HMGN1-208ENST00000443046 Q8N2B8 174 aa11.7□□□□□ -0.54
HMGN1-208ENST00000443046 DTX3Q8N9I9 347 aa11.7□□□□□ -0.54
HMGN1-208ENST00000443046 OR1M1Q8NGA1 313 aa11.7□□□□□ -0.54
HMGN1-208ENST00000443046 OR4F17Q8NGA8 305 aa11.7□□□□□ -0.54
HMGN1-208ENST00000443046 OR56B2PQ8NGI1 322 aa11.7□□□□□ -0.54
HMGN1-208ENST00000443046 RORBQ92753 470 aa11.7□□□□□ -0.54
HMGN1-208ENST00000443046 SPTSSAQ969W0 71 aa11.7□□□□□ -0.54
HMGN1-208ENST00000443046 SPSB4Q96A44 273 aa11.7□□□□□ -0.54
HMGN1-208ENST00000443046 CLPTM1LQ96KA5 538 aa11.7□□□□□ -0.54
HMGN1-208ENST00000443046 OR4F4Q96R69 305 aa11.7□□□□□ -0.54
HMGN1-208ENST00000443046 NMNAT3Q96T66 252 aa11.7□□□□□ -0.54
HMGN1-208ENST00000443046 DNTTIP1Q9H147 329 aa11.7□□□□□ -0.54
HMGN1-208ENST00000443046 TLNRD1Q9H1K6 362 aa11.7□□□□□ -0.54
HMGN1-208ENST00000443046 ARPC3O15145 178 aa11.69□□□□□ -0.54
HMGN1-208ENST00000443046 MPIG6BO95866 241 aa11.69□□□□□ -0.54
HMGN1-208ENST00000443046 IKZF1Q13422 519 aa11.69□□□□□ -0.54
HMGN1-208ENST00000443046 LRRC75BQ2VPJ9 315 aa11.69□□□□□ -0.54
HMGN1-208ENST00000443046 IFI44LQ53G44 452 aa11.69□□□□□ -0.54
HMGN1-208ENST00000443046 LRRC10Q5BKY1 277 aa11.69□□□□□ -0.54
HMGN1-208ENST00000443046 SMARCD3Q6STE5 483 aa11.69□□□□□ -0.54
HMGN1-208ENST00000443046 DRAM2Q6UX65 266 aa11.69□□□□□ -0.54
HMGN1-208ENST00000443046 LIAT1Q6ZQX7 453 aa11.69□□□□□ -0.54
HMGN1-208ENST00000443046 CBLL1Q75N03 491 aa11.69□□□□□ -0.54
HMGN1-208ENST00000443046 OR51G2Q8NGK0 314 aa11.69□□□□□ -0.54
HMGN1-208ENST00000443046 R3HDM4Q96D70 268 aa11.69□□□□□ -0.54
HMGN1-208ENST00000443046 NPFFR1Q9GZQ6 430 aa11.69□□□□□ -0.54
HMGN1-208ENST00000443046 ZNF702PQ9H963 129 aa11.69□□□□□ -0.54
HMGN1-208ENST00000443046 KCNG2Q9UJ96 466 aa11.69□□□□□ -0.54
HMGN1-208ENST00000443046 DNAH7Q8WXX0 4024 aa11.69□□□□□ -0.54
HMGN1-208ENST00000443046 DYNC2H1Q8NCM8 4307 aaKnown RBP11.69□□□□□ -0.54
HMGN1-208ENST00000443046 OR6C68A6NDL8 312 aa11.68□□□□□ -0.54
HMGN1-208ENST00000443046 UNC119BA6NIH7 251 aa11.68□□□□□ -0.54
HMGN1-208ENST00000443046 MRASO14807 208 aa11.68□□□□□ -0.54
HMGN1-208ENST00000443046 HIST1H1CP16403 213 aaKnown RBP11.68□□□□□ -0.54
HMGN1-208ENST00000443046 NOS3P29474 1203 aa11.68□□□□□ -0.54
HMGN1-208ENST00000443046 DDOSTP39656 456 aa11.68□□□□□ -0.54
HMGN1-208ENST00000443046 CSNK2BP67870 215 aa11.68□□□□□ -0.54
HMGN1-208ENST00000443046 AGBL2Q5U5Z8 902 aa11.68□□□□□ -0.54
HMGN1-208ENST00000443046 PGBD2Q6P3X8 592 aa11.68□□□□□ -0.54
HMGN1-208ENST00000443046 ZNF788Q6ZQV5 615 aa11.68□□□□□ -0.54
HMGN1-208ENST00000443046 DPY19L4Q7Z388 723 aa11.68□□□□□ -0.54
HMGN1-208ENST00000443046 PAPD5Q8NDF8 572 aaKnown RBP11.68□□□□□ -0.54
HMGN1-208ENST00000443046 OR9Q1Q8NGQ5 310 aa11.68□□□□□ -0.54
HMGN1-208ENST00000443046 ERMAPQ96PL5 475 aaPredicted RBP11.68□□□□□ -0.54
HMGN1-208ENST00000443046 GAFA1Q96PS6 74 aa11.68□□□□□ -0.54
HMGN1-208ENST00000443046 FUZQ9BT04 418 aa11.68□□□□□ -0.54
HMGN1-208ENST00000443046 WNT10AQ9GZT5 417 aa11.68□□□□□ -0.54
HMGN1-208ENST00000443046 OPA3Q9H6K4 179 aa11.68□□□□□ -0.54
HMGN1-208ENST00000443046 RPRD1BQ9NQG5 326 aaKnown RBP11.68□□□□□ -0.54
HMGN1-208ENST00000443046 HAO2Q9NYQ3 351 aa11.68□□□□□ -0.54
HMGN1-208ENST00000443046 GMPR2Q9P2T1 348 aaKnown RBP11.68□□□□□ -0.54
HMGN1-208ENST00000443046 SF3B6Q9Y3B4 125 aaKnown RBP11.68□□□□□ -0.54
HMGN1-208ENST00000443046 ENPP4Q9Y6X5 453 aa11.68□□□□□ -0.54
HMGN1-208ENST00000443046 SACSQ9NZJ4 4579 aa11.68□□□□□ -0.54
HMGN1-208ENST00000443046 BBIP1A8MTZ0 92 aa11.67□□□□□ -0.54
HMGN1-208ENST00000443046 TIPRLO75663 272 aa11.67□□□□□ -0.54
HMGN1-208ENST00000443046 RENP00797 406 aa11.67□□□□□ -0.54
HMGN1-208ENST00000443046 PSKH1P11801 424 aa11.67□□□□□ -0.54
HMGN1-208ENST00000443046 NAA10P41227 235 aaPredicted RBP11.67□□□□□ -0.54
HMGN1-208ENST00000443046 CAV3P56539 151 aa11.67□□□□□ -0.54
HMGN1-208ENST00000443046 MXRA7P84157 204 aa11.67□□□□□ -0.54
HMGN1-208ENST00000443046 SEC23BQ15437 767 aa11.67□□□□□ -0.54
HMGN1-208ENST00000443046 DGUOKQ16854 277 aa11.67□□□□□ -0.54
HMGN1-208ENST00000443046 OR5T2Q8NGG2 359 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms