RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 C11orf91Q3C1V1 193 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 ZNF529Q6P280 563 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 PRSS45Q7RTY3 260 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 CNEP1R1Q8N9A8 125 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 C1orf162Q8NEQ5 155 aaPredicted RBP5.26□□□□□ -1.57
VPS50-205ENST00000441602 OR52N4Q8NGI2 321 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 SLC25A28Q96A46 364 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 SGK3Q96BR1 496 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 SCNM1Q9BWG6 230 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 TMEM59Q9BXS4 323 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 METTL9Q9H1A3 318 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 CNTD2Q9H8S5 307 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 GPN1Q9HCN4 374 aaPredicted RBP5.26□□□□□ -1.57
VPS50-205ENST00000441602 OBP2BQ9NPH6 170 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 IFT46Q9NQC8 304 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 NOP16Q9Y3C1 178 aaKnown RBP5.26□□□□□ -1.57
VPS50-205ENST00000441602 ALPK2Q86TB3 2170 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 EP300Q09472 2414 aaPredicted RBP5.26□□□□□ -1.57
VPS50-205ENST00000441602 CACNA1CQ13936 2221 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 A0A096LPE4 126 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 A0A1W2PPZ6 126 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 MEIOCA2RUB1 952 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 H7C417 338 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 CCNKO75909 580 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 DBHP09172 617 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 GSTP1P09211 210 aaKnown RBP5.26□□□□□ -1.57
VPS50-205ENST00000441602 H2AFB2P0C5Z0 115 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 FAHP16930 419 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 HLA-DMAP28067 261 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 PTH2RP49190 550 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 GNG2P59768 71 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 RBPJQ06330 500 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 KRTAP27-1Q3LI81 207 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 TBRG1Q3YBR2 411 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 C1QTNF12Q5T7M4 302 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 NSUN5P2Q63ZY6 315 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 OLFML2AQ68BL7 652 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 ZNF585AQ6P3V2 769 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 INO80CQ6PI98 192 aaPredicted RBP5.26□□□□□ -1.57
VPS50-205ENST00000441602 MOB3CQ70IA8 216 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 ZNF584Q8IVC4 421 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 CADM3Q8N126 398 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 OR5AS1Q8N127 324 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 BCL2L2Q92843 193 aaPredicted RBP5.26□□□□□ -1.57
VPS50-205ENST00000441602 HPS1Q92902 700 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 PIGTQ969N2 578 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 AUNIPQ9H7T9 357 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 PLSCR2Q9NRY7 297 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 MTFP1Q9UDX5 166 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 LHX6Q9UPM6 363 aa5.26□□□□□ -1.57
VPS50-205ENST00000441602 DISC1C4P0D8 188 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 LMX1BO60663 402 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 CRTAPO75718 401 aaPredicted RBP5.25□□□□□ -1.57
VPS50-205ENST00000441602 TGM6O95932 706 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 NRASP01111 189 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 HLA-HP01893 362 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 TPOP07202 933 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 GTF2F2P13984 249 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 CCNOP22674 350 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 CPT2P23786 658 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 STOMP27105 288 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 KIR2DL3P43628 341 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 FUT6P51993 359 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 MTCP1P56278 107 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 TMPRSS3P57727 454 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 MRPS15P82914 257 aaKnown RBP5.25□□□□□ -1.57
VPS50-205ENST00000441602 KLF9Q13886 244 aaPredicted RBP5.25□□□□□ -1.57
VPS50-205ENST00000441602 MEF2DQ14814 521 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 PNLIPRP3Q17RR3 467 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 ACSF3Q4G176 576 aaPredicted RBP5.25□□□□□ -1.57
VPS50-205ENST00000441602 ACTBL2Q562R1 376 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 SFRP5Q5T4F7 317 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 C1orf185Q5T7R7 199 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 PLCXD3Q63HM9 321 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 BTN2A1Q7KYR7 527 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 CELF2-AS1Q8N7Q2 184 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 SLC7A6Q92536 515 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 NEDD4LQ96PU5 975 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 C1QTNF5Q9BXJ0 243 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 MMP28Q9H239 520 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 MCUBQ9NWR8 336 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 PRSS50Q9UI38 385 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 ZNF221Q9UK13 617 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 PTPRBP23467 1997 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 CNTRLQ7Z7A1 2325 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 KIAA1549Q9HCM3 1950 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 ANKRD20A5PA0PJZ0 165 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 ANKRD30BLA7E2S9 258 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 LDLRAD4O15165 306 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 IL2RAP01589 272 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 PATE4P0C8F1 98 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 TMEM225BP0DP42 221 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 SELEP16581 610 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 TUBG1P23258 451 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 SLC6A1P30531 599 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 NTF4P34130 210 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 RBP2P50120 134 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 PPA1Q15181 289 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 KISS1Q15726 138 aa5.25□□□□□ -1.57
VPS50-205ENST00000441602 PCGF3Q3KNV8 242 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms