RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 FTMTQ8N4E7 242 aa16.61■□□□□ 0.25
SHROOM1-204ENST00000440118 ZNF454Q8N9F8 522 aa16.61■□□□□ 0.25
SHROOM1-204ENST00000440118 TECTBQ96PL2 329 aa16.61■□□□□ 0.25
SHROOM1-204ENST00000440118 PAPOLGQ9BWT3 736 aaKnown RBP16.61■□□□□ 0.25
SHROOM1-204ENST00000440118 TRIM36Q9NQ86 728 aa16.61■□□□□ 0.25
SHROOM1-204ENST00000440118 PAPOLBQ9NRJ5 636 aaKnown RBP16.61■□□□□ 0.25
SHROOM1-204ENST00000440118 IGHV2-70DA0A0C4DH43 119 aa16.6■□□□□ 0.25
SHROOM1-204ENST00000440118 TCRBV3S1A0A5B6 114 aa16.6■□□□□ 0.25
SHROOM1-204ENST00000440118 C3orf80F5H4A9 247 aa16.6■□□□□ 0.25
SHROOM1-204ENST00000440118 FSTL3O95633 263 aa16.6■□□□□ 0.25
SHROOM1-204ENST00000440118 CD80P33681 288 aa16.6■□□□□ 0.25
SHROOM1-204ENST00000440118 RASSF2P50749 326 aa16.6■□□□□ 0.25
SHROOM1-204ENST00000440118 SFRP4Q6FHJ7 346 aaPredicted RBP16.6■□□□□ 0.25
SHROOM1-204ENST00000440118 TIGD4Q8IY51 512 aa16.6■□□□□ 0.25
SHROOM1-204ENST00000440118 PLPP7Q8NBV4 271 aa16.6■□□□□ 0.25
SHROOM1-204ENST00000440118 DNAJC9Q8WXX5 260 aa16.6■□□□□ 0.25
SHROOM1-204ENST00000440118 GCDHQ92947 438 aaPredicted RBP16.6■□□□□ 0.25
SHROOM1-204ENST00000440118 SLC7A6OSQ96CW6 309 aaPredicted RBP16.6■□□□□ 0.25
SHROOM1-204ENST00000440118 PRRG3Q9BZD7 231 aa16.6■□□□□ 0.25
SHROOM1-204ENST00000440118 MARCH7Q9H992 704 aa16.6■□□□□ 0.25
SHROOM1-204ENST00000440118 NTN4Q9HB63 628 aa16.6■□□□□ 0.25
SHROOM1-204ENST00000440118 LGALS8O00214 317 aa16.59■□□□□ 0.25
SHROOM1-204ENST00000440118 PHYHO14832 338 aa16.59■□□□□ 0.25
SHROOM1-204ENST00000440118 TIPRLO75663 272 aa16.59■□□□□ 0.25
SHROOM1-204ENST00000440118 FSHBP01225 129 aa16.59■□□□□ 0.25
SHROOM1-204ENST00000440118 OPRL1P41146 370 aa16.59■□□□□ 0.25
SHROOM1-204ENST00000440118 SNCBQ16143 134 aa16.59■□□□□ 0.25
SHROOM1-204ENST00000440118 SNAPC1Q16533 368 aa16.59■□□□□ 0.25
SHROOM1-204ENST00000440118 SLC35D3Q5M8T2 416 aa16.59■□□□□ 0.25
SHROOM1-204ENST00000440118 OTOSQ8NHW6 89 aa16.59■□□□□ 0.25
SHROOM1-204ENST00000440118 SPSB4Q96A44 273 aa16.59■□□□□ 0.25
SHROOM1-204ENST00000440118 AMELYQ99218 206 aa16.59■□□□□ 0.25
SHROOM1-204ENST00000440118 MS4A7Q9GZW8 240 aaPredicted RBP16.59■□□□□ 0.25
SHROOM1-204ENST00000440118 RGCCQ9H4X1 137 aa16.59■□□□□ 0.25
SHROOM1-204ENST00000440118 ERVK-18Q9QC07 812 aa16.59■□□□□ 0.25
SHROOM1-204ENST00000440118 LAMP5Q9UJQ1 280 aa16.59■□□□□ 0.25
SHROOM1-204ENST00000440118 TRAV38-1A0A0B4J264 116 aa16.58■□□□□ 0.24
SHROOM1-204ENST00000440118 ANXA2P2A6NMY6 339 aa16.58■□□□□ 0.24
SHROOM1-204ENST00000440118 FAM3AP98173 230 aa16.58■□□□□ 0.24
SHROOM1-204ENST00000440118 CDK5Q00535 292 aa16.58■□□□□ 0.24
SHROOM1-204ENST00000440118 LCN1P1Q5VSP4 162 aa16.58■□□□□ 0.24
SHROOM1-204ENST00000440118 TMEM236Q5W0B7 351 aa16.58■□□□□ 0.24
SHROOM1-204ENST00000440118 LYPD2Q6UXB3 125 aa16.58■□□□□ 0.24
SHROOM1-204ENST00000440118 CCDC121Q6ZUS5 278 aa16.58■□□□□ 0.24
SHROOM1-204ENST00000440118 RHOUQ7L0Q8 258 aa16.58■□□□□ 0.24
SHROOM1-204ENST00000440118 KRT77Q7Z794 578 aa16.58■□□□□ 0.24
SHROOM1-204ENST00000440118 PARP8Q8N3A8 854 aa16.58■□□□□ 0.24
SHROOM1-204ENST00000440118 SIGLECL1Q8N7X8 197 aa16.58■□□□□ 0.24
SHROOM1-204ENST00000440118 CSNK2A3Q8NEV1 391 aa16.58■□□□□ 0.24
SHROOM1-204ENST00000440118 BBS1Q8NFJ9 593 aa16.58■□□□□ 0.24
SHROOM1-204ENST00000440118 FAM216AQ8WUB2 273 aa16.58■□□□□ 0.24
SHROOM1-204ENST00000440118 RAB40AQ8WXH6 277 aa16.58■□□□□ 0.24
SHROOM1-204ENST00000440118 SGK3Q96BR1 496 aa16.58■□□□□ 0.24
SHROOM1-204ENST00000440118 NUDT16L1Q9BRJ7 211 aaKnown RBP16.58■□□□□ 0.24
SHROOM1-204ENST00000440118 SLC25A19Q9HC21 320 aa16.58■□□□□ 0.24
SHROOM1-204ENST00000440118 TVP23BQ9NYZ1 205 aa16.58■□□□□ 0.24
SHROOM1-204ENST00000440118 ANK2Q01484 3957 aa16.58■□□□□ 0.24
SHROOM1-204ENST00000440118 IGHV3OR16-10A0A075B7F0 116 aa16.57■□□□□ 0.24
SHROOM1-204ENST00000440118 TRAV40A0A0B4J280 105 aa16.57■□□□□ 0.24
SHROOM1-204ENST00000440118 hCG_38984A0A1B0GV85 526 aa16.57■□□□□ 0.24
SHROOM1-204ENST00000440118 OOEPA6NGQ2 149 aa16.57■□□□□ 0.24
SHROOM1-204ENST00000440118 ADAM20O43506 726 aa16.57■□□□□ 0.24
SHROOM1-204ENST00000440118 ENSAO43768 121 aaKnown RBP16.57■□□□□ 0.24
SHROOM1-204ENST00000440118 GSK3AP49840 483 aa16.57■□□□□ 0.24
SHROOM1-204ENST00000440118 NPY4RP50391 375 aa16.57■□□□□ 0.24
SHROOM1-204ENST00000440118 PSMA6P60900 246 aaKnown RBP16.57■□□□□ 0.24
SHROOM1-204ENST00000440118 APOFQ13790 326 aa16.57■□□□□ 0.24
SHROOM1-204ENST00000440118 WDR25Q64LD2 544 aaPredicted RBP16.57■□□□□ 0.24
SHROOM1-204ENST00000440118 ZNF826PQ6ZT77 177 aa16.57■□□□□ 0.24
SHROOM1-204ENST00000440118 COMMD2Q86X83 199 aa16.57■□□□□ 0.24
SHROOM1-204ENST00000440118 PAPD5Q8NDF8 572 aaKnown RBP16.57■□□□□ 0.24
SHROOM1-204ENST00000440118 NRBF2Q96F24 287 aa16.57■□□□□ 0.24
SHROOM1-204ENST00000440118 CADM1Q9BY67 442 aaKnown RBP16.57■□□□□ 0.24
SHROOM1-204ENST00000440118 ZNF69Q9UC07 566 aa16.57■□□□□ 0.24
SHROOM1-204ENST00000440118 GSC2O15499 205 aa16.56■□□□□ 0.24
SHROOM1-204ENST00000440118 PTBP3O95758 552 aaKnown RBP16.56■□□□□ 0.24
SHROOM1-204ENST00000440118 MRPL3P09001 348 aaKnown RBP16.56■□□□□ 0.24
SHROOM1-204ENST00000440118 HOXA4Q00056 320 aaPredicted RBP16.56■□□□□ 0.24
SHROOM1-204ENST00000440118 PAX8Q06710 450 aa16.56■□□□□ 0.24
SHROOM1-204ENST00000440118 C1orf146Q5VVC0 180 aa16.56■□□□□ 0.24
SHROOM1-204ENST00000440118 FAM81AQ8TBF8 368 aa16.56■□□□□ 0.24
SHROOM1-204ENST00000440118 MICU1Q9BPX6 476 aa16.56■□□□□ 0.24
SHROOM1-204ENST00000440118 NIPAL2Q9H841 368 aa16.56■□□□□ 0.24
SHROOM1-204ENST00000440118 KRT84Q9NSB2 600 aa16.56■□□□□ 0.24
SHROOM1-204ENST00000440118 NDUFA2O43678 99 aa16.55■□□□□ 0.24
SHROOM1-204ENST00000440118 GYPAP02724 150 aa16.55■□□□□ 0.24
SHROOM1-204ENST00000440118 CRISP1P54107 249 aa16.55■□□□□ 0.24
SHROOM1-204ENST00000440118 IL5RAQ01344 420 aa16.55■□□□□ 0.24
SHROOM1-204ENST00000440118 BNIP1Q12981 228 aa16.55■□□□□ 0.24
SHROOM1-204ENST00000440118 KLF17Q5JT82 389 aaPredicted RBP16.55■□□□□ 0.24
SHROOM1-204ENST00000440118 CD276Q5ZPR3 534 aa16.55■□□□□ 0.24
SHROOM1-204ENST00000440118 KCTD18Q6PI47 426 aaPredicted RBP16.55■□□□□ 0.24
SHROOM1-204ENST00000440118 KCTD8Q6ZWB6 473 aa16.55■□□□□ 0.24
SHROOM1-204ENST00000440118 OR5K1Q8NHB7 308 aa16.55■□□□□ 0.24
SHROOM1-204ENST00000440118 LRRC29Q8WV35 223 aa16.55■□□□□ 0.24
SHROOM1-204ENST00000440118 RTL8AQ9BWD3 113 aa16.55■□□□□ 0.24
SHROOM1-204ENST00000440118 KLHDC2Q9Y2U9 406 aa16.55■□□□□ 0.24
SHROOM1-204ENST00000440118 LRP12Q9Y561 859 aa16.55■□□□□ 0.24
SHROOM1-204ENST00000440118 ATP5HO75947 161 aa16.54■□□□□ 0.24
SHROOM1-204ENST00000440118 PPIAL4GP0DN37 164 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms