RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 MDH2P40926 338 aaKnown RBP19.86■□□□□ 0.77
VARS-217ENST00000440048 ZIK1Q3SY52 487 aaPredicted RBP19.86■□□□□ 0.77
VARS-217ENST00000440048 KLBQ86Z14 1044 aa19.86■□□□□ 0.77
VARS-217ENST00000440048 ZNF679Q8IYX0 411 aa19.86■□□□□ 0.77
VARS-217ENST00000440048 KLHL36Q8N4N3 616 aa19.86■□□□□ 0.77
VARS-217ENST00000440048 SPERTQ8NA61 448 aa19.86■□□□□ 0.77
VARS-217ENST00000440048 Q8TCH9 128 aa19.86■□□□□ 0.77
VARS-217ENST00000440048 MNTQ99583 582 aa19.86■□□□□ 0.77
VARS-217ENST00000440048 PATZ1Q9HBE1 687 aaKnown RBP19.86■□□□□ 0.77
VARS-217ENST00000440048 UFSP2Q9NUQ7 469 aa19.86■□□□□ 0.77
VARS-217ENST00000440048 WARS2Q9UGM6 360 aaKnown RBP19.86■□□□□ 0.77
VARS-217ENST00000440048 FAM20BO75063 409 aa19.85■□□□□ 0.77
VARS-217ENST00000440048 ZNF254O75437 659 aa19.85■□□□□ 0.77
VARS-217ENST00000440048 PTBP3O95758 552 aaKnown RBP19.85■□□□□ 0.77
VARS-217ENST00000440048 HTR1FP30939 366 aa19.85■□□□□ 0.77
VARS-217ENST00000440048 CDC42P60953 191 aa19.85■□□□□ 0.77
VARS-217ENST00000440048 FAM201AQ5SY85 155 aa19.85■□□□□ 0.77
VARS-217ENST00000440048 C1orf87Q8N0U7 546 aa19.85■□□□□ 0.77
VARS-217ENST00000440048 OR51G2Q8NGK0 314 aa19.85■□□□□ 0.77
VARS-217ENST00000440048 OR11L1Q8NGX0 322 aa19.85■□□□□ 0.77
VARS-217ENST00000440048 FAM81AQ8TBF8 368 aa19.85■□□□□ 0.77
VARS-217ENST00000440048 LYZL4Q96KX0 146 aa19.85■□□□□ 0.77
VARS-217ENST00000440048 G6PC2Q9NQR9 355 aa19.85■□□□□ 0.77
VARS-217ENST00000440048 CLN6Q9NWW5 311 aa19.85■□□□□ 0.77
VARS-217ENST00000440048 FAM206AQ9NX38 181 aa19.85■□□□□ 0.77
VARS-217ENST00000440048 IKZF2Q9UKS7 526 aa19.85■□□□□ 0.77
VARS-217ENST00000440048 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.84■□□□□ 0.77
VARS-217ENST00000440048 TMEM269A0A1B0GVZ9 245 aa19.84■□□□□ 0.77
VARS-217ENST00000440048 ACOD1A6NK06 481 aa19.84■□□□□ 0.77
VARS-217ENST00000440048 IRF2P14316 349 aa19.84■□□□□ 0.77
VARS-217ENST00000440048 DCTDP32321 178 aa19.84■□□□□ 0.77
VARS-217ENST00000440048 RIDAP52758 137 aaKnown RBP19.84■□□□□ 0.77
VARS-217ENST00000440048 CXCR4P61073 352 aa19.84■□□□□ 0.77
VARS-217ENST00000440048 OR8B8Q15620 311 aa19.84■□□□□ 0.77
VARS-217ENST00000440048 ZNF322Q6U7Q0 402 aaPredicted RBP19.84■□□□□ 0.77
VARS-217ENST00000440048 PQLC1Q8N2U9 271 aa19.84■□□□□ 0.77
VARS-217ENST00000440048 MUC20Q8N307 709 aaPredicted RBP19.84■□□□□ 0.77
VARS-217ENST00000440048 PLPP7Q8NBV4 271 aa19.84■□□□□ 0.77
VARS-217ENST00000440048 CSNK2A3Q8NEV1 391 aa19.84■□□□□ 0.77
VARS-217ENST00000440048 UBE2FQ969M7 185 aa19.84■□□□□ 0.77
VARS-217ENST00000440048 EME1Q96AY2 570 aa19.84■□□□□ 0.77
VARS-217ENST00000440048 HRASLS5Q96KN8 279 aa19.84■□□□□ 0.77
VARS-217ENST00000440048 MDFIQ99750 246 aa19.84■□□□□ 0.77
VARS-217ENST00000440048 APOL4Q9BPW4 351 aa19.84■□□□□ 0.77
VARS-217ENST00000440048 FN3KRPQ9HA64 309 aa19.84■□□□□ 0.77
VARS-217ENST00000440048 TMEM165Q9HC07 324 aa19.84■□□□□ 0.77
VARS-217ENST00000440048 RHBDD3Q9Y3P4 386 aa19.84■□□□□ 0.77
VARS-217ENST00000440048 E9PQ18 207 aa19.83■□□□□ 0.77
VARS-217ENST00000440048 ZNF670-ZNF695F2Z2N8 137 aa19.83■□□□□ 0.77
VARS-217ENST00000440048 F5H0A9 414 aaPredicted RBP19.83■□□□□ 0.77
VARS-217ENST00000440048 PHYHO14832 338 aa19.83■□□□□ 0.77
VARS-217ENST00000440048 LCN2P80188 198 aa19.83■□□□□ 0.77
VARS-217ENST00000440048 OR8S1Q8NH09 359 aa19.83■□□□□ 0.77
VARS-217ENST00000440048 C9orf16Q9BUW7 83 aa19.83■□□□□ 0.77
VARS-217ENST00000440048 PPP1R3EQ9H7J1 279 aa19.83■□□□□ 0.77
VARS-217ENST00000440048 IMPAD1Q9NX62 359 aa19.83■□□□□ 0.77
VARS-217ENST00000440048 ZNF391Q9UJN7 358 aa19.83■□□□□ 0.77
VARS-217ENST00000440048 DOCK11Q5JSL3 2073 aa19.82■□□□□ 0.76
VARS-217ENST00000440048 PPIAL4EA0A075B759 164 aa19.82■□□□□ 0.76
VARS-217ENST00000440048 CEACAM18A8MTB9 384 aa19.82■□□□□ 0.76
VARS-217ENST00000440048 PPIAL4DF5H284 164 aa19.82■□□□□ 0.76
VARS-217ENST00000440048 MAGEB4O15481 346 aaPredicted RBP19.82■□□□□ 0.76
VARS-217ENST00000440048 FSTL3O95633 263 aa19.82■□□□□ 0.76
VARS-217ENST00000440048 GRPP07492 148 aa19.82■□□□□ 0.76
VARS-217ENST00000440048 PPIAL4FP0DN26 164 aa19.82■□□□□ 0.76
VARS-217ENST00000440048 ACKR3P25106 362 aa19.82■□□□□ 0.76
VARS-217ENST00000440048 ZFP36P26651 326 aaKnown RBP19.82■□□□□ 0.76
VARS-217ENST00000440048 MZT1Q08AG7 82 aa19.82■□□□□ 0.76
VARS-217ENST00000440048 ZNF829Q3KNS6 432 aaPredicted RBP19.82■□□□□ 0.76
VARS-217ENST00000440048 FAHD2BQ6P2I3 314 aaPredicted RBP19.82■□□□□ 0.76
VARS-217ENST00000440048 TRUB1Q8WWH5 349 aaKnown RBP19.82■□□□□ 0.76
VARS-217ENST00000440048 FAHD2AQ96GK7 314 aa19.82■□□□□ 0.76
VARS-217ENST00000440048 MBOAT4Q96T53 435 aa19.82■□□□□ 0.76
VARS-217ENST00000440048 SLC29A1Q99808 456 aa19.82■□□□□ 0.76
VARS-217ENST00000440048 PAPOLGQ9BWT3 736 aaKnown RBP19.82■□□□□ 0.76
VARS-217ENST00000440048 PBOV1Q9GZY1 135 aa19.82■□□□□ 0.76
VARS-217ENST00000440048 C14orf119Q9NWQ9 140 aa19.82■□□□□ 0.76
VARS-217ENST00000440048 RNF7Q9UBF6 113 aa19.82■□□□□ 0.76
VARS-217ENST00000440048 PPIAL4AQ9Y536 164 aa19.82■□□□□ 0.76
VARS-217ENST00000440048 A0A0U1RQV5 110 aa19.81■□□□□ 0.76
VARS-217ENST00000440048 FOXH1O75593 365 aa19.81■□□□□ 0.76
VARS-217ENST00000440048 APOL3O95236 402 aa19.81■□□□□ 0.76
VARS-217ENST00000440048 BAG2O95816 211 aa19.81■□□□□ 0.76
VARS-217ENST00000440048 PNPP00491 289 aa19.81■□□□□ 0.76
VARS-217ENST00000440048 THBS2P35442 1172 aa19.81■□□□□ 0.76
VARS-217ENST00000440048 SRP14P37108 136 aaKnown RBP19.81■□□□□ 0.76
VARS-217ENST00000440048 GNALP38405 381 aa19.81■□□□□ 0.76
VARS-217ENST00000440048 SEC61A1P61619 476 aaKnown RBP19.81■□□□□ 0.76
VARS-217ENST00000440048 HOXA4Q00056 320 aaPredicted RBP19.81■□□□□ 0.76
VARS-217ENST00000440048 MFGE8Q08431 387 aaPredicted RBP19.81■□□□□ 0.76
VARS-217ENST00000440048 POU4F2Q12837 409 aa19.81■□□□□ 0.76
VARS-217ENST00000440048 TMED1Q13445 227 aa19.81■□□□□ 0.76
VARS-217ENST00000440048 SNCBQ16143 134 aa19.81■□□□□ 0.76
VARS-217ENST00000440048 ZNF404Q494X3 552 aa19.81■□□□□ 0.76
VARS-217ENST00000440048 SPATA3Q8NHX4 192 aa19.81■□□□□ 0.76
VARS-217ENST00000440048 RFKQ969G6 155 aa19.81■□□□□ 0.76
VARS-217ENST00000440048 TBX5Q99593 518 aa19.81■□□□□ 0.76
VARS-217ENST00000440048 TMEM246Q9BRR3 403 aa19.81■□□□□ 0.76
VARS-217ENST00000440048 C1orf123Q9NWV4 160 aa19.81■□□□□ 0.76
VARS-217ENST00000440048 MRM2Q9UI43 246 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms