RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 C9orf16Q9BUW7 83 aa11.14□□□□□ -0.63
LINC00399-201ENST00000439008 OR10A2Q9H208 303 aa11.14□□□□□ -0.63
LINC00399-201ENST00000439008 G6PC2Q9NQR9 355 aa11.14□□□□□ -0.63
LINC00399-201ENST00000439008 TMEM160Q9NX00 188 aa11.14□□□□□ -0.63
LINC00399-201ENST00000439008 UBAP1Q9NZ09 502 aa11.14□□□□□ -0.63
LINC00399-201ENST00000439008 MRPL15Q9P015 296 aaKnown RBP11.14□□□□□ -0.63
LINC00399-201ENST00000439008 WARS2Q9UGM6 360 aaKnown RBP11.14□□□□□ -0.63
LINC00399-201ENST00000439008 TMEM269A0A1B0GVZ9 245 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 ISPDA4D126 451 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 B4DSR2 109 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 J3QRE1 110 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 GMDSO60547 372 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 AVPP01185 164 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 APOC1P02654 83 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 TTRP02766 147 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 MSMBP08118 114 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 ANPEPP15144 967 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 DVL1P1P54792 670 aaPredicted RBP11.13□□□□□ -0.63
LINC00399-201ENST00000439008 CDC42P60953 191 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 SNRPGP62308 76 aaKnown RBP11.13□□□□□ -0.63
LINC00399-201ENST00000439008 BTG1P62324 171 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 ZNF85Q03923 595 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 SLC25A30Q5SVS4 291 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 LPCAT4Q643R3 524 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 KCTD18Q6PI47 426 aaPredicted RBP11.13□□□□□ -0.63
LINC00399-201ENST00000439008 C10orf67Q8IYJ2 551 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 ENTHD1Q8IYW4 607 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 CELF2-AS1Q8N7Q2 184 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 Q8TCH9 128 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 ASB17Q8WXJ9 295 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 TIMD4Q96H15 378 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 GAL3ST1Q99999 423 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 PBOV1Q9GZY1 135 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 NIPAL2Q9H841 368 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 TMEM165Q9HC07 324 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 FAM118AQ9NWS6 357 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 HIF1ANQ9NWT6 349 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 IKZF2Q9UKS7 526 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 KCNS2Q9ULS6 477 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 SLC22A13Q9Y226 551 aa11.13□□□□□ -0.63
LINC00399-201ENST00000439008 A0A1B0GTI1 187 aa11.12□□□□□ -0.63
LINC00399-201ENST00000439008 F5H0A9 414 aaPredicted RBP11.12□□□□□ -0.63
LINC00399-201ENST00000439008 ZNF254O75437 659 aa11.12□□□□□ -0.63
LINC00399-201ENST00000439008 FCN3O75636 299 aa11.12□□□□□ -0.63
LINC00399-201ENST00000439008 DCTDP32321 178 aa11.12□□□□□ -0.63
LINC00399-201ENST00000439008 DDOSTP39656 456 aa11.12□□□□□ -0.63
LINC00399-201ENST00000439008 RIDAP52758 137 aaKnown RBP11.12□□□□□ -0.63
LINC00399-201ENST00000439008 CSNK2BP67870 215 aa11.12□□□□□ -0.63
LINC00399-201ENST00000439008 ELF3P78545 371 aaPredicted RBP11.12□□□□□ -0.63
LINC00399-201ENST00000439008 SLC3A1Q07837 685 aa11.12□□□□□ -0.63
LINC00399-201ENST00000439008 RCN1Q15293 331 aa11.12□□□□□ -0.63
LINC00399-201ENST00000439008 OCLNQ16625 522 aa11.12□□□□□ -0.63
LINC00399-201ENST00000439008 ZSCAN26Q16670 478 aa11.12□□□□□ -0.63
LINC00399-201ENST00000439008 LRRC36Q1X8D7 754 aa11.12□□□□□ -0.63
LINC00399-201ENST00000439008 ZNF181Q2M3W8 571 aa11.12□□□□□ -0.63
LINC00399-201ENST00000439008 LYPD2Q6UXB3 125 aa11.12□□□□□ -0.63
LINC00399-201ENST00000439008 RHOXF1Q8NHV9 184 aa11.12□□□□□ -0.63
LINC00399-201ENST00000439008 OR51E1Q8TCB6 317 aa11.12□□□□□ -0.63
LINC00399-201ENST00000439008 APH1BQ8WW43 257 aa11.12□□□□□ -0.63
LINC00399-201ENST00000439008 TRUB1Q8WWH5 349 aaKnown RBP11.12□□□□□ -0.63
LINC00399-201ENST00000439008 TMEM186Q96B77 213 aa11.12□□□□□ -0.63
LINC00399-201ENST00000439008 ITPKCQ96DU7 683 aa11.12□□□□□ -0.63
LINC00399-201ENST00000439008 TMEM246Q9BRR3 403 aa11.12□□□□□ -0.63
LINC00399-201ENST00000439008 MROQ9BYG7 248 aa11.12□□□□□ -0.63
LINC00399-201ENST00000439008 OPA3Q9H6K4 179 aa11.12□□□□□ -0.63
LINC00399-201ENST00000439008 METTL17Q9H7H0 456 aaPredicted RBP11.12□□□□□ -0.63
LINC00399-201ENST00000439008 IMPAD1Q9NX62 359 aa11.12□□□□□ -0.63
LINC00399-201ENST00000439008 NUFIP1Q9UHK0 495 aaKnown RBP11.12□□□□□ -0.63
LINC00399-201ENST00000439008 ORC6Q9Y5N6 252 aa11.12□□□□□ -0.63
LINC00399-201ENST00000439008 GMPPBQ9Y5P6 360 aa11.12□□□□□ -0.63
LINC00399-201ENST00000439008 TMEM14AQ9Y6G1 99 aa11.12□□□□□ -0.63
LINC00399-201ENST00000439008 A0A0U1RQV5 110 aa11.11□□□□□ -0.63
LINC00399-201ENST00000439008 LOC100130705A0A1B0GUX0 176 aa11.11□□□□□ -0.63
LINC00399-201ENST00000439008 ZNF850A8MQ14 1090 aa11.11□□□□□ -0.63
LINC00399-201ENST00000439008 CEACAM18A8MTB9 384 aa11.11□□□□□ -0.63
LINC00399-201ENST00000439008 ZNF670-ZNF695F2Z2N8 137 aa11.11□□□□□ -0.63
LINC00399-201ENST00000439008 GRPP07492 148 aa11.11□□□□□ -0.63
LINC00399-201ENST00000439008 EGR1P18146 543 aa11.11□□□□□ -0.63
LINC00399-201ENST00000439008 PEX2P28328 305 aa11.11□□□□□ -0.63
LINC00399-201ENST00000439008 THBS2P35442 1172 aa11.11□□□□□ -0.63
LINC00399-201ENST00000439008 MDH2P40926 338 aaKnown RBP11.11□□□□□ -0.63
LINC00399-201ENST00000439008 ISL1P61371 349 aa11.11□□□□□ -0.63
LINC00399-201ENST00000439008 LCN2P80188 198 aa11.11□□□□□ -0.63
LINC00399-201ENST00000439008 KRTAP21-3Q3LHN1 58 aa11.11□□□□□ -0.63
LINC00399-201ENST00000439008 CHRFAM7AQ494W8 412 aa11.11□□□□□ -0.63
LINC00399-201ENST00000439008 TMEM155Q4W5P6 130 aa11.11□□□□□ -0.63
LINC00399-201ENST00000439008 KRT74Q7RTS7 529 aa11.11□□□□□ -0.63
LINC00399-201ENST00000439008 GALNT4Q8N4A0 578 aa11.11□□□□□ -0.63
LINC00399-201ENST00000439008 OR10H4Q8NGA5 316 aa11.11□□□□□ -0.63
LINC00399-201ENST00000439008 HPSE2Q8WWQ2 592 aa11.11□□□□□ -0.63
LINC00399-201ENST00000439008 SEH1LQ96EE3 360 aa11.11□□□□□ -0.63
LINC00399-201ENST00000439008 RNFT2Q96EX2 444 aa11.11□□□□□ -0.63
LINC00399-201ENST00000439008 FAM71F1Q96KD3 344 aaPredicted RBP11.11□□□□□ -0.63
LINC00399-201ENST00000439008 SLC22A4Q9H015 551 aa11.11□□□□□ -0.63
LINC00399-201ENST00000439008 RGCCQ9H4X1 137 aa11.11□□□□□ -0.63
LINC00399-201ENST00000439008 SP140LQ9H930 580 aa11.11□□□□□ -0.63
LINC00399-201ENST00000439008 PATZ1Q9HBE1 687 aaKnown RBP11.11□□□□□ -0.63
LINC00399-201ENST00000439008 AMBNQ9NP70 447 aa11.11□□□□□ -0.63
LINC00399-201ENST00000439008 GPR84Q9NQS5 396 aa11.11□□□□□ -0.63
LINC00399-201ENST00000439008 CDC42EP3Q9UKI2 254 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms