RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 ANP32DO95626 131 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 SERPINA3P01011 423 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 SERPINA7P05543 415 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 S100A6P06703 90 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 CRYGBP07316 175 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 TACSTD2P09758 323 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 UQCRBP14927 111 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 SDC1P18827 310 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 PAX7P23759 505 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 PSMA2P25787 234 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 AK4P27144 223 aaPredicted RBP1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 CASP1P29466 404 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 PRDX6P30041 224 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 PRDX2P32119 198 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 CHI3L1P36222 383 aaPredicted RBP1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 NUP62P37198 522 aaPredicted RBP1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 CSKP41240 450 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 GRIA1P42261 906 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 MAGEA1P43355 309 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 RGS4P49798 205 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 AIF1P55008 147 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 CDH4P55283 916 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 CLDN8P56748 225 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 GNG11P61952 73 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 YWHAGP61981 247 aaKnown RBP eCLIP1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 HAMPP81172 84 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 GTF2BQ00403 316 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 ZNF85Q03923 595 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 EIF4EBP1Q13541 118 aaPredicted RBP1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 TFDP1Q14186 410 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 ZIC1Q15915 447 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 WHAMMP3Q1A5X7 153 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 GOLGA7BQ2TAP0 167 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 BCL7AQ4VC05 210 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 ZNF311Q5JNZ3 666 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 CTSL3PQ5NE16 218 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 BEND6Q5SZJ8 279 aaPredicted RBP1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 CARD17Q5XLA6 110 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 LRRC66Q68CR7 880 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 PDPK2PQ6A1A2 396 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 CLEC6AQ6EIG7 209 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 PMF1Q6P1K2 205 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 CERS6Q6ZMG9 384 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 BZW1Q7L1Q6 419 aaKnown RBP1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 ZNF720Q7Z2F6 126 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 LRRC52Q8N7C0 313 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 CEP112Q8N8E3 955 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 BBS1Q8NFJ9 593 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 OR10H4Q8NGA5 316 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 TRMT10AQ8TBZ6 339 aaKnown RBP1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 SLC37A2Q8TED4 501 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 GLYATL2Q8WU03 294 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 IL1F10Q8WWZ1 152 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 OSTF1Q92882 214 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 CIDECQ96AQ7 238 aaPredicted RBP1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 SLC25A36Q96CQ1 311 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 ARL5BQ96KC2 179 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 C4orf36Q96KX1 117 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 IFT74Q96LB3 600 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 VPS35Q96QK1 796 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 CHP1Q99653 195 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 TSG101Q99816 390 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 CCDC94Q9BW85 323 aaPredicted RBP1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 MRPL37Q9BZE1 423 aaKnown RBP1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 TSGA10Q9BZW7 698 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 DNTTIP1Q9H147 329 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 BLZF1Q9H2G9 400 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 DCAF13Q9NV06 445 aaKnown RBP1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 ETNK2Q9NVF9 386 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 EURLQ9NYK6 297 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 IL20Q9NYY1 176 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 EHFQ9NZC4 300 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 NDUFA13Q9P0J0 144 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 GHRLQ9UBU3 117 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 NUP50Q9UKX7 468 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 CHMP2BQ9UQN3 213 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 COQ4Q9Y3A0 265 aa1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 EXOSC1Q9Y3B2 195 aaKnown RBP1.54□□□□□ -2.16
HMGB1P18-201ENST00000438801 TRAV26-1A0A087WT03 109 aa1.53□□□□□ -2.16
HMGB1P18-201ENST00000438801 NSG1A0A0A6YYJ2 146 aa1.53□□□□□ -2.16
HMGB1P18-201ENST00000438801 MDFIC2A0A1B0GVS7 189 aa1.53□□□□□ -2.16
HMGB1P18-201ENST00000438801 OR6C74A6NCV1 312 aa1.53□□□□□ -2.16
HMGB1P18-201ENST00000438801 WASHC1A8K0Z3 465 aa1.53□□□□□ -2.16
HMGB1P18-201ENST00000438801 H7C417 338 aa1.53□□□□□ -2.16
HMGB1P18-201ENST00000438801 J3QLI3 93 aa1.53□□□□□ -2.16
HMGB1P18-201ENST00000438801 TM9SF1O15321 606 aa1.53□□□□□ -2.16
HMGB1P18-201ENST00000438801 ZNF208O43345 1280 aa1.53□□□□□ -2.16
HMGB1P18-201ENST00000438801 CALUO43852 315 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P18-201ENST00000438801 FCMRO60667 390 aa1.53□□□□□ -2.16
HMGB1P18-201ENST00000438801 BCAS1O75363 584 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P18-201ENST00000438801 OR4F21O95013 312 aa1.53□□□□□ -2.16
HMGB1P18-201ENST00000438801 LGI1O95970 557 aa1.53□□□□□ -2.16
HMGB1P18-201ENST00000438801 IGSF6O95976 241 aa1.53□□□□□ -2.16
HMGB1P18-201ENST00000438801 OPN1LWP04000 364 aa1.53□□□□□ -2.16
HMGB1P18-201ENST00000438801 CCDC172P0C7W6 258 aa1.53□□□□□ -2.16
HMGB1P18-201ENST00000438801 PABPC4LP0CB38 370 aaKnown RBP1.53□□□□□ -2.16
HMGB1P18-201ENST00000438801 OR8G3PP0DMU2 310 aa1.53□□□□□ -2.16
HMGB1P18-201ENST00000438801 TROVE2P10155 538 aaKnown RBP eCLIP1.53□□□□□ -2.16
HMGB1P18-201ENST00000438801 PNMTP11086 282 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms