RNA–Protein interactions for RNA: ENST00000435823.1

COL28A1-203, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL28A1, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-203ENST00000435823 MOGAT3Q86VF5 341 aa9.67□□□□□ -0.86
COL28A1-203ENST00000435823 COMMD2Q86X83 199 aa9.67□□□□□ -0.86
COL28A1-203ENST00000435823 C1orf87Q8N0U7 546 aa9.67□□□□□ -0.86
COL28A1-203ENST00000435823 ZNF555Q8NEP9 628 aa9.67□□□□□ -0.86
COL28A1-203ENST00000435823 OR10H4Q8NGA5 316 aa9.67□□□□□ -0.86
COL28A1-203ENST00000435823 OR8B12Q8NGG6 310 aa9.67□□□□□ -0.86
COL28A1-203ENST00000435823 OR11L1Q8NGX0 322 aa9.67□□□□□ -0.86
COL28A1-203ENST00000435823 ERGIC1Q969X5 290 aa9.67□□□□□ -0.86
COL28A1-203ENST00000435823 Q96MT0 163 aa9.67□□□□□ -0.86
COL28A1-203ENST00000435823 TBX5Q99593 518 aa9.67□□□□□ -0.86
COL28A1-203ENST00000435823 MOB1AQ9H8S9 216 aa9.67□□□□□ -0.86
COL28A1-203ENST00000435823 SMPD3Q9NY59 655 aaPredicted RBP9.67□□□□□ -0.86
COL28A1-203ENST00000435823 ZNF319Q9P2F9 582 aa9.67□□□□□ -0.86
COL28A1-203ENST00000435823 IGHV3-64DA0A0J9YX35 117 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 LOC100130705A0A1B0GUX0 176 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 PRR32B1ATL7 298 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 B4DSR2 109 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 E9PQ18 207 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 ST8SIA5O15466 376 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 LMX1BO60663 402 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 ENTPD6O75354 484 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 APOL3O95236 402 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 MTNR1AP48039 350 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 BTG1P62324 171 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 ACTC1P68032 377 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 ACTA1P68133 377 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 MAB21L1Q13394 359 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 LRRC36Q1X8D7 754 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 MUC20Q8N307 709 aaPredicted RBP9.66□□□□□ -0.86
COL28A1-203ENST00000435823 GALNT4Q8N4A0 578 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 SPICQ8N5J4 248 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 RFLNBQ8N5W9 214 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 PACRGLQ8N7B6 248 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 OR8S1Q8NH09 359 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 ZNF420Q8TAQ5 688 aaPredicted RBP9.66□□□□□ -0.86
COL28A1-203ENST00000435823 UBE2FQ969M7 185 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 ITFG2Q969R8 447 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 RNFT2Q96EX2 444 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 C1orf159Q96HA4 380 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 APOL4Q9BPW4 351 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 SOX7Q9BT81 388 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 PAPOLGQ9BWT3 736 aaKnown RBP9.66□□□□□ -0.86
COL28A1-203ENST00000435823 PBOV1Q9GZY1 135 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 ZNF665Q9H7R5 613 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 FN3KRPQ9HA64 309 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 ABCB9Q9NP78 766 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 C14orf119Q9NWQ9 140 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 FAM118AQ9NWS6 357 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 TMEM160Q9NX00 188 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 FAM206AQ9NX38 181 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 UBAP1Q9NZ09 502 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 PCDHB10Q9UN67 800 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 GTF2A1LQ9UNN4 478 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 PCDHGB1Q9Y5G3 927 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 R4GMQ9 66 aa9.66□□□□□ -0.86
COL28A1-203ENST00000435823 NIPBLQ6KC79 2804 aaeCLIP9.66□□□□□ -0.86
COL28A1-203ENST00000435823 C2CD3Q4AC94 2353 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 A0A0U1RQV5 110 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 A0A1W2PQL4 384 aaPredicted RBP9.65□□□□□ -0.86
COL28A1-203ENST00000435823 ERICH4A6NGS2 130 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 ANXA2P2A6NMY6 339 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 FAM157AC9JC47 383 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 LOC110117498-PIK3R3F6TDL0 507 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 TMEM178BH3BS89 294 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 SLC16A6O15403 523 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 CRLF1O75462 422 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 IGHV2-70P01814 119 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 ATP6V1B1P15313 513 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 HOXB4P17483 251 aaPredicted RBP9.65□□□□□ -0.86
COL28A1-203ENST00000435823 PCMT1P22061 227 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 LMO4P61968 165 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 OR8B8Q15620 311 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 ZNF181Q2M3W8 571 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 TMEM155Q4W5P6 130 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 BCL2L15Q5TBC7 163 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 PRAMEF6Q5VXH4 476 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 LPCAT4Q643R3 524 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 FAM220AQ7Z4H9 259 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 GLCCI1Q86VQ1 547 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 ENTHD1Q8IYW4 607 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 KLHL36Q8N4N3 616 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 YIPF7Q8N8F6 280 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 PLPP7Q8NBV4 271 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 OR51F2Q8NH61 342 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 Q8TCH9 128 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 DVL3Q92997 716 aaPredicted RBP9.65□□□□□ -0.86
COL28A1-203ENST00000435823 UFSP2Q9NUQ7 469 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 DCAF16Q9NXF7 216 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 LPAR3Q9UBY5 353 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 NUFIP1Q9UHK0 495 aaKnown RBP9.65□□□□□ -0.86
COL28A1-203ENST00000435823 MRM2Q9UI43 246 aaKnown RBP9.65□□□□□ -0.86
COL28A1-203ENST00000435823 OR52A1Q9UKL2 312 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 MPC1Q9Y5U8 109 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 SNX5Q9Y5X3 404 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 NF1P21359 2839 aa9.65□□□□□ -0.86
COL28A1-203ENST00000435823 METTL15A6NJ78 407 aa9.64□□□□□ -0.87
COL28A1-203ENST00000435823 A6NLC8 198 aa9.64□□□□□ -0.87
COL28A1-203ENST00000435823 MAGEB4O15481 346 aaPredicted RBP9.64□□□□□ -0.87
COL28A1-203ENST00000435823 MTRF1O75570 445 aaKnown RBP9.64□□□□□ -0.87
COL28A1-203ENST00000435823 SULT1C4O75897 302 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms