RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 NDUFB3O43676 98 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 HIST1H1CP16403 213 aaKnown RBP9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 ZNF823P16415 610 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 ANOS1P23352 680 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 SLC6A6P31641 620 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 GRK5P34947 590 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 SAA4P35542 130 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 IKZF1Q13422 519 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 SEC23BQ15437 767 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 SLC36A1Q7Z2H8 476 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 SLC15A3Q8IY34 581 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 FAM216BQ8N7L0 139 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 Q8N7P7 452 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 SDR9C7Q8NEX9 313 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 OR8S1Q8NH09 359 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 H1FXQ92522 213 aaKnown RBP9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 FAM162AQ96A26 154 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 RCN3Q96D15 328 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 SEH1LQ96EE3 360 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 RNPEPL1Q9HAU8 725 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 OR6C68A6NDL8 312 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 DIRAS1O95057 198 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 MUC1P15941 1255 aaPredicted RBP9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 NCK1P16333 377 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 NOS3P29474 1203 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 RPS27P42677 84 aaKnown RBP9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 PRKXP51817 358 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 DRAM2Q6UX65 266 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 DPY19L4Q7Z388 723 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 ARPINQ7Z6K5 226 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 ZBTB46Q86UZ6 589 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 OR52J3Q8NH60 311 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 FANK1Q8TC84 345 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 PPP1R14AQ96A00 147 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 IFT27Q9BW83 186 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 OR52D1Q9H346 318 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 TOR3AQ9H497 397 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 MRPL22Q9NWU5 206 aaKnown RBP9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 KCNG2Q9UJ96 466 aa9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 PRPF19Q9UMS4 504 aaKnown RBP9.5□□□□□ -0.89
CHRNA1-207ENST00000435083 ANKRD30BLA7E2S9 258 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 HMGB1P1B2RPK0 211 aaPredicted RBP9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 H3BUX3 64 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 ACOT8O14734 319 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 ARPC3O15145 178 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 SLC2A1P11166 492 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 RHCEP18577 417 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 PYCR1P32322 319 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 EFNB2P52799 333 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 LOXL3P58215 753 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 GMFBP60983 142 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 CSNK2BP67870 215 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 KRT72Q14CN4 511 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 TAF13Q15543 124 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 LY6EQ16553 131 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 OXLD1Q5BKU9 147 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 LRRC10Q5BKY1 277 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 WDR86Q86TI4 376 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 C11orf53Q8IXP5 236 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 LYG1Q8N1E2 194 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 KLHDC1Q8N7A1 406 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 OR5T2Q8NGG2 359 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 OR4C13Q8NGP0 309 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 PPP1R35Q8TAP8 253 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 SGCDQ92629 289 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 ITPKCQ96DU7 683 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 DMRTB1Q96MA1 342 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 COPS4Q9BT78 406 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 DCTN5Q9BTE1 182 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 NDUFAF4Q9P032 175 aa9.49□□□□□ -0.89
CHRNA1-207ENST00000435083 TVP23AA6NH52 213 aa9.48□□□□□ -0.89
CHRNA1-207ENST00000435083 NME4O00746 187 aa9.48□□□□□ -0.89
CHRNA1-207ENST00000435083 VSIG10L2P0DP72 767 aa9.48□□□□□ -0.89
CHRNA1-207ENST00000435083 DDOSTP39656 456 aa9.48□□□□□ -0.89
CHRNA1-207ENST00000435083 NAA10P41227 235 aaPredicted RBP9.48□□□□□ -0.89
CHRNA1-207ENST00000435083 KIR2DS4P43632 304 aa9.48□□□□□ -0.89
CHRNA1-207ENST00000435083 GSK3BP49841 420 aa9.48□□□□□ -0.89
CHRNA1-207ENST00000435083 UBE2E1P51965 193 aa9.48□□□□□ -0.89
CHRNA1-207ENST00000435083 SLC7A2P52569 658 aa9.48□□□□□ -0.89
CHRNA1-207ENST00000435083 SLC35F1Q5T1Q4 408 aa9.48□□□□□ -0.89
CHRNA1-207ENST00000435083 WDR82Q6UXN9 313 aa9.48□□□□□ -0.89
CHRNA1-207ENST00000435083 OR1M1Q8NGA1 313 aa9.48□□□□□ -0.89
CHRNA1-207ENST00000435083 OR2T6Q8NHC8 308 aa9.48□□□□□ -0.89
CHRNA1-207ENST00000435083 CFHR4Q92496 578 aa9.48□□□□□ -0.89
CHRNA1-207ENST00000435083 TNFRSF14Q92956 283 aa9.48□□□□□ -0.89
CHRNA1-207ENST00000435083 SSX3Q99909 188 aa9.48□□□□□ -0.89
CHRNA1-207ENST00000435083 OPA3Q9H6K4 179 aa9.48□□□□□ -0.89
CHRNA1-207ENST00000435083 CENPMQ9NSP4 180 aa9.48□□□□□ -0.89
CHRNA1-207ENST00000435083 CAPN7Q9Y6W3 813 aa9.48□□□□□ -0.89
CHRNA1-207ENST00000435083 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.47□□□□□ -0.89
CHRNA1-207ENST00000435083 TBX1O43435 398 aa9.47□□□□□ -0.89
CHRNA1-207ENST00000435083 XRCC2O43543 280 aa9.47□□□□□ -0.89
CHRNA1-207ENST00000435083 SELLP14151 372 aa9.47□□□□□ -0.89
CHRNA1-207ENST00000435083 AMY2BP19961 511 aa9.47□□□□□ -0.89
CHRNA1-207ENST00000435083 POU1F1P28069 291 aa9.47□□□□□ -0.89
CHRNA1-207ENST00000435083 OTX1P32242 354 aaPredicted RBP9.47□□□□□ -0.89
CHRNA1-207ENST00000435083 TGM4P49221 684 aa9.47□□□□□ -0.89
CHRNA1-207ENST00000435083 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.47□□□□□ -0.89
CHRNA1-207ENST00000435083 ACSM1Q08AH1 577 aa9.47□□□□□ -0.89
CHRNA1-207ENST00000435083 NSUN5P1Q3KNT7 163 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms