RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 GHSRQ92847 366 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 CREB3L1Q96BA8 519 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 ADTRPQ96IZ2 230 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 CEP170P1Q96L14 293 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 BMFQ96LC9 184 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 KCNS3Q9BQ31 491 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 C20orf144Q9BQM9 153 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 TMEM175Q9BSA9 504 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 PLA2G12AQ9BZM1 189 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 SLC38A10Q9HBR0 1119 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 IFT46Q9NQC8 304 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 RBFOX1Q9NWB1 397 aaKnown RBP1.75□□□□□ -2.13
PTPN4-205ENST00000433888 CTSFQ9UBX1 484 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 MRM2Q9UI43 246 aaKnown RBP1.75□□□□□ -2.13
PTPN4-205ENST00000433888 CD84Q9UIB8 345 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 TSSC4Q9Y5U2 329 aaPredicted RBP1.75□□□□□ -2.13
PTPN4-205ENST00000433888 KCNE3Q9Y6H6 103 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 V9GYY5 206 aaPredicted RBP1.75□□□□□ -2.13
PTPN4-205ENST00000433888 C2orf16Q68DN1 1984 aa1.75□□□□□ -2.13
PTPN4-205ENST00000433888 PIK3R4Q99570 1358 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 ERICH2A1L162 156 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 C5orf63A6NC05 138 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 TMEM150BA6NC51 233 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 PDZK1P1A8MUH7 402 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 HSBP1L1C9JCN9 74 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 TMX2-CTNND1H3BSU7 103 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 LAD1O00515 517 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 POLR3GO15318 223 aaPredicted RBP1.74□□□□□ -2.13
PTPN4-205ENST00000433888 YKT6O15498 198 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 B4GALT5O43286 388 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 DHRS3O75911 302 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 BRI3O95415 125 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 LCA5LO95447 670 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 SLC25A27O95847 323 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 PCCAP05165 728 aaPredicted RBP1.74□□□□□ -2.13
PTPN4-205ENST00000433888 BCHEP06276 602 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 RHOCP08134 193 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 HSPD1P10809 573 aaKnown RBP1.74□□□□□ -2.13
PTPN4-205ENST00000433888 RAB3BP20337 219 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 RAB5AP20339 215 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 PRKACBP22694 351 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 MYCNOSP40205 109 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 HCCSP53701 268 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 KRTAP12-3P60328 96 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 UBE2NP61088 152 aaKnown RBP1.74□□□□□ -2.13
PTPN4-205ENST00000433888 RAP1AP62834 184 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 PRR3P79522 188 aaKnown RBP1.74□□□□□ -2.13
PTPN4-205ENST00000433888 HMGCS1Q01581 520 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 TCP10Q12799 353 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 C18orf21Q32NC0 220 aaPredicted RBP1.74□□□□□ -2.13
PTPN4-205ENST00000433888 SAXO2Q658L1 398 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 KDM4DQ6B0I6 523 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 APOBEC3HQ6NTF7 200 aaKnown RBP1.74□□□□□ -2.13
PTPN4-205ENST00000433888 WDR82Q6UXN9 313 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 NPSR1Q6W5P4 371 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 ZNF429Q86V71 674 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 SYS1Q8N2H4 156 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 RNF182Q8N6D2 247 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 CYB561A3Q8NBI2 242 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 OR52P1PQ8NH57 321 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 TM4SF18Q96CE8 201 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 CDX2Q99626 313 aaPredicted RBP1.74□□□□□ -2.13
PTPN4-205ENST00000433888 AGMATQ9BSE5 352 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 CALN1Q9BXU9 219 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 ARV1Q9H2C2 271 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 GOLPH3Q9H4A6 298 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 C12orf10Q9HB07 376 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 TMEM27Q9HBJ8 222 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 SLC40A1Q9NP59 571 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 ISYNA1Q9NPH2 558 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 RRAGDQ9NQL2 400 aaPredicted RBP1.74□□□□□ -2.13
PTPN4-205ENST00000433888 SIRT7Q9NRC8 400 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 DDIT4Q9NX09 232 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 MS4A12Q9NXJ0 267 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 CHMP5Q9NZZ3 219 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 CES1P1Q9UKY3 287 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 KLF12Q9Y4X4 402 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 OR51B2Q9Y5P1 312 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 WIF1Q9Y5W5 379 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 WDR62O43379 1518 aa1.74□□□□□ -2.13
PTPN4-205ENST00000433888 PIKFYVEQ9Y2I7 2098 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 IGKV1-27A0A075B6S5 117 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 A0A0B4J2E0 115 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 IGHV1-69DA0A0B4J2H0 117 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 A0A0J9YXV3 536 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 TRPC5OSA6NMA1 111 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 SEC14L6B5MCN3 397 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 PRMT5O14744 637 aaPredicted RBP1.73□□□□□ -2.13
PTPN4-205ENST00000433888 RAD51BO15315 384 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 TRAPPC6AO75865 159 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 RHOXF2BP0C7M4 288 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 WARSP23381 471 aaKnown RBP1.73□□□□□ -2.13
PTPN4-205ENST00000433888 GNRHRP30968 328 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 HOXA9P31269 272 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 PFN2P35080 140 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 SSTR5P35346 364 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 ARL2P36404 184 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 UGT2B10P36537 528 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 RANBP1P43487 201 aa1.73□□□□□ -2.13
PTPN4-205ENST00000433888 AP1S2P56377 157 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms