RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 HMX2A2RU54 273 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 ZNF850A8MQ14 1090 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 CEACAM18A8MTB9 384 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 SERPINE3A8MV23 424 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 DEGS1O15121 323 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 FAM20BO75063 409 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 BCAS1O75363 584 aaPredicted RBP3.92□□□□□ -1.78
UBE4A-202ENST00000431736 ZNF254O75437 659 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 HTR3BO95264 441 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 NRASP01111 189 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 BMI1P35226 326 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 SOX6P35712 828 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 TSPAN31Q12999 210 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 BTN2A1Q7KYR7 527 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 DOK3Q7L591 496 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 HAVCR1Q96D42 359 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 DOK1Q99704 481 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 TMEM204Q9BSN7 226 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 TXLNGYQ9BZA5 131 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 PAIP1Q9H074 479 aaKnown RBP3.92□□□□□ -1.78
UBE4A-202ENST00000431736 RNPEPL1Q9HAU8 725 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 NPAP1Q9NZP6 1156 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 ZNF225Q9UK10 706 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 COMMD3-BMI1R4GMX3 469 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 TRAF3IP2O43734 574 aaPredicted RBP3.92□□□□□ -1.78
UBE4A-202ENST00000431736 PSMG1O95456 288 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 APOA2P02652 100 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 LMO1P25800 156 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 ARPC4P59998 168 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 RPS16P62249 146 aaKnown RBP3.92□□□□□ -1.78
UBE4A-202ENST00000431736 ACTA2P62736 377 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 ACTG2P63267 376 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 CLVS2Q5SYC1 327 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 NMNAT3Q96T66 252 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 CENPOQ9BU64 300 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 NUAK2Q9H093 628 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 NMNAT1Q9HAN9 279 aaPredicted RBP3.92□□□□□ -1.78
UBE4A-202ENST00000431736 TMEM165Q9HC07 324 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 NLKQ9UBE8 527 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 KPTNQ9Y664 436 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 ZNF879B4DU55 563 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 CNIH1O95406 144 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 IGHV1-46P01743 117 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 CELA3BP08861 270 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 AZGP1P25311 298 aaKnown RBP3.92□□□□□ -1.78
UBE4A-202ENST00000431736 GIFP27352 417 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 GYS2P54840 703 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 MTCP1P56278 107 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 PAN3Q58A45 887 aaKnown RBP3.92□□□□□ -1.78
UBE4A-202ENST00000431736 NKAPLQ5M9Q1 402 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 PRAMEF6Q5VXH4 476 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 DYRK2Q92630 601 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 CCL13Q99616 98 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 PRDM13Q9H4Q3 707 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 ROS1P08922 2347 aa3.92□□□□□ -1.78
UBE4A-202ENST00000431736 LEUTXA8MZ59 168 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 LRRN3E7EW58 273 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 SOX14O95416 240 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 TSPAN19P0C672 248 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 MAPK3P27361 379 aaPredicted RBP3.91□□□□□ -1.78
UBE4A-202ENST00000431736 CCKARP32238 428 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 RPL15P61313 204 aaKnown RBP3.91□□□□□ -1.78
UBE4A-202ENST00000431736 UBA52P62987 128 aaKnown RBP3.91□□□□□ -1.78
UBE4A-202ENST00000431736 FMODQ06828 376 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 APOFQ13790 326 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 GALEQ14376 348 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 GRK1Q15835 563 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 ZSCAN26Q16670 478 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 LTC4SQ16873 150 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 ODF4Q2M2E3 257 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 ZBTB37Q5TC79 503 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 LIAT1Q6ZQX7 453 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 OR51L1Q8NGJ5 315 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 SLC7A13Q8TCU3 470 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 KCTD12Q96CX2 325 aaKnown RBP3.91□□□□□ -1.78
UBE4A-202ENST00000431736 TBX5Q99593 518 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 RSRP1Q9BUV0 290 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 OR6C3Q9NZP0 311 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 POLQO75417 2590 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 H7C2Y5 167 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 ACOT8O14734 319 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 TBX6O95947 436 aaPredicted RBP3.91□□□□□ -1.78
UBE4A-202ENST00000431736 TNFRSF1BP20333 461 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 GADD45AP24522 165 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 ZNF404Q494X3 552 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 MBNL2Q5VZF2 373 aaKnown RBP3.91□□□□□ -1.78
UBE4A-202ENST00000431736 NKAIN4Q8IVV8 208 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 JAGN1Q8N5M9 183 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 POC5Q8NA72 575 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 PLPP7Q8NBV4 271 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 DYNLRB2Q8TF09 96 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 MAELQ96JY0 434 aaKnown RBP3.91□□□□□ -1.78
UBE4A-202ENST00000431736 MOGAT1Q96PD6 335 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 EBF4Q9BQW3 602 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 PLGRKTQ9HBL7 147 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 DCAF13Q9NV06 445 aaKnown RBP3.91□□□□□ -1.78
UBE4A-202ENST00000431736 ZNF221Q9UK13 617 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 CLDN16Q9Y5I7 305 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 GMPPBQ9Y5P6 360 aa3.91□□□□□ -1.78
UBE4A-202ENST00000431736 DOCK10Q96BY6 2186 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms