RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 ATPAF1Q5TC12 328 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-207ENST00000429896 METTL11BQ5VVY1 283 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 EGFL6Q8IUX8 553 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 OR4M1Q8NGD0 313 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 OCSTAMPQ9BR26 566 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 AICDAQ9GZX7 198 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 NRIP3Q9NQ35 241 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 ICAM5Q9UMF0 924 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 R4GMQ9 66 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 CHD5Q8TDI0 1954 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 ABCA7Q8IZY2 2146 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 NUP210Q8TEM1 1887 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-207ENST00000429896 CENPVL1A0A0U1RR11 272 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 M0QYG6 137 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 TXNDC12O95881 172 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 BGLAPP02818 100 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 RNF128Q8TEB7 428 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 TNFRSF19Q9NS68 423 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 GABRA4P48169 554 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 ZNF439Q8NDP4 499 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 HGDQ93099 445 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 SPIN2AQ99865 258 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 SPIN2BQ9BPZ2 258 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 GPR173Q9NS66 373 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 STEAP1Q9UHE8 339 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 ERRFI1Q9UJM3 462 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-207ENST00000429896 MRPS28Q9Y2Q9 187 aaKnown RBP11.49□□□□□ -0.57
PTCH1-207ENST00000429896 LOC102723996A0A087X1L8 192 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 RPS25P62851 125 aaKnown RBP11.49□□□□□ -0.57
PTCH1-207ENST00000429896 UBE2NLQ5JXB2 153 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 OR4D11Q8NGI4 311 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 OR4Q3Q8NH05 313 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 UCN2Q96RP3 112 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 KCNJ15Q99712 375 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 SDHAF2Q9NX18 166 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 NTMQ9P121 344 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 E9PI62 339 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 ARPC3O15145 178 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 SULT1C4O75897 302 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 SRP9P49458 86 aaKnown RBP11.49□□□□□ -0.57
PTCH1-207ENST00000429896 PLA2G7Q13093 441 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 PBOV1Q9GZY1 135 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 ZNF286AQ9HBT8 521 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.49□□□□□ -0.57
PTCH1-207ENST00000429896 THADAQ6YHU6 1953 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 LOC107986453A0A1B0GWG9 222 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 SCG5P05408 212 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 RPS27P42677 84 aaKnown RBP11.48□□□□□ -0.57
PTCH1-207ENST00000429896 HMGA2P52926 109 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 RTL6Q6ICC9 239 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 GLRX5Q86SX6 157 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 OR6S1Q8NH40 331 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 A0A1W2PPH5 198 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 SLC35A2P78381 396 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 SLC17A1Q14916 467 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 CTU2Q2VPK5 515 aaKnown RBP11.48□□□□□ -0.57
PTCH1-207ENST00000429896 PLAC9Q5JTB6 97 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 C8orf82Q6P1X6 216 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-207ENST00000429896 Q6ZNX1 250 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 C1orf87Q8N0U7 546 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 SLC22A24Q8N4F4 322 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 DEFB108BQ8NET1 73 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 SIGLEC12Q96PQ1 595 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 TMEM8BA6NDV4 472 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 CDK2AP1O14519 115 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 ACAA2P42765 397 aaKnown RBP11.48□□□□□ -0.57
PTCH1-207ENST00000429896 CLDN20P56880 219 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 NARFLQ9H6Q4 476 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 NTN4Q9HB63 628 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 TXNL4BQ9NX01 149 aaKnown RBP11.48□□□□□ -0.57
PTCH1-207ENST00000429896 COL4A4P53420 1690 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-207ENST00000429896 MCRIP1C9JLW8 97 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 C16orf97H3BN30 126 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 TK1P04183 234 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 INPP5JQ15735 1006 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-207ENST00000429896 BTLAQ7Z6A9 289 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 BPIFCQ8NFQ6 507 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 PIGMQ9H3S5 423 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 NOX4Q9NPH5 578 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 A0A0J9YW62 118 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 BLVRBP30043 206 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-207ENST00000429896 HOXD11P31277 338 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-207ENST00000429896 PARP16Q8N5Y8 322 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 FAM213BQ8TBF2 198 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 HYLS1Q96M11 299 aa11.48□□□□□ -0.57
PTCH1-207ENST00000429896 hCG_1809904A0A1W2PP81 198 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 A0A1W2PPE2 198 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 A0A1W2PR64 198 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 A0A1W2PRV1 198 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 CRYM-AS1A6NIL9 109 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 TGFBR3LH3BV60 316 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 TPT1P13693 172 aaKnown RBP11.47□□□□□ -0.57
PTCH1-207ENST00000429896 ALKAL2Q6UX46 152 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 LINC00299Q6ZSB3 139 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 SMIM15Q7Z3B0 74 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 SYT9Q86SS6 491 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 SEMA5BQ9P283 1151 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 A0A1B0GUH1 482 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 LGALS8O00214 317 aa11.47□□□□□ -0.57
PTCH1-207ENST00000429896 HTR2CP28335 458 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms