RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 RNF128Q8TEB7 428 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 PIGTQ969N2 578 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 ZNF578Q96N58 590 aaPredicted RBP7.2□□□□□ -1.26
HPS4-205ENST00000429411 PRRT1Q99946 306 aa7.2□□□□□ -1.26
HPS4-205ENST00000429411 PCNX3Q9H6A9 2034 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 IGHV3-15A0A0B4J1V0 119 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 HSBP1L1C9JCN9 74 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 NPIPB9F8W1W9 429 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 H7C1Q1 480 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 ATXN7O15265 892 aaPredicted RBP7.19□□□□□ -1.26
HPS4-205ENST00000429411 WDPCPO95876 746 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 F10P00742 488 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 F12P00748 615 aaPredicted RBP7.19□□□□□ -1.26
HPS4-205ENST00000429411 CCNOP22674 350 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 FGL1Q08830 312 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 TCF15Q12870 199 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 MFSD13AQ14CX5 517 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 LINC00114Q6XXX2 140 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 OR5H2Q8NGV7 314 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 C11orf40Q8WZ69 217 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 THRSPQ92748 146 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 NICN1Q9BSH3 213 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 DUSP15Q9H1R2 295 aaPredicted RBP7.19□□□□□ -1.26
HPS4-205ENST00000429411 MRPS28Q9Y2Q9 187 aaKnown RBP7.19□□□□□ -1.26
HPS4-205ENST00000429411 LSM5Q9Y4Y9 91 aaKnown RBP7.19□□□□□ -1.26
HPS4-205ENST00000429411 CSAG2Q9Y5P2 127 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 RNF215Q9Y6U7 377 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 DOCK7Q96N67 2140 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 MEX3AA1L020 520 aaKnown RBP7.19□□□□□ -1.26
HPS4-205ENST00000429411 PMS2P1A4D2B8 440 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 ADAP1O75689 374 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 PTBP3O95758 552 aaKnown RBP7.19□□□□□ -1.26
HPS4-205ENST00000429411 ACAA1P09110 424 aaPredicted RBP7.19□□□□□ -1.26
HPS4-205ENST00000429411 CPN1P15169 458 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 RPS4XP62701 263 aaKnown RBP7.19□□□□□ -1.26
HPS4-205ENST00000429411 SWI5Q1ZZU3 235 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 EMC4Q5J8M3 183 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 RAET1LQ5VY80 246 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 ATRAIDQ6UW56 229 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 ZFP82Q8N141 532 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 PNLDC1Q8NA58 520 aaKnown RBP7.19□□□□□ -1.26
HPS4-205ENST00000429411 ADAD2Q8NCV1 583 aaKnown RBP7.19□□□□□ -1.26
HPS4-205ENST00000429411 SLC26A10Q8NG04 563 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 ELP5Q8TE02 316 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 CA5BP1Q8WTZ4 195 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 RAB3CQ96E17 227 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 OR6C1Q96RD1 312 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 SLC25A21Q9BQT8 299 aaPredicted RBP7.19□□□□□ -1.26
HPS4-205ENST00000429411 DEFB126Q9BYW3 111 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 C1orf198Q9H425 327 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 EHFQ9NZC4 300 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 KIF25Q9UIL4 384 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 HRH3Q9Y5N1 445 aa7.19□□□□□ -1.26
HPS4-205ENST00000429411 FRG2CA6NGY1 282 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 PRR19A6NJB7 356 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 SMAD7O15105 426 aaKnown RBP7.18□□□□□ -1.26
HPS4-205ENST00000429411 RER1O15258 196 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 GALR2O43603 387 aaPredicted RBP7.18□□□□□ -1.26
HPS4-205ENST00000429411 PRH1P02810 166 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 TMEM225BP0DP42 221 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 PVALBP20472 110 aaPredicted RBP7.18□□□□□ -1.26
HPS4-205ENST00000429411 NME2P22392 152 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 DAP3P51398 398 aaKnown RBP7.18□□□□□ -1.26
HPS4-205ENST00000429411 CHRFAM7AQ494W8 412 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 C14orf28Q4W4Y0 310 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 EXOSC6Q5RKV6 272 aaKnown RBP7.18□□□□□ -1.26
HPS4-205ENST00000429411 ZNF660Q6AZW8 331 aaPredicted RBP7.18□□□□□ -1.26
HPS4-205ENST00000429411 H1FNTQ75WM6 255 aaPredicted RBP7.18□□□□□ -1.26
HPS4-205ENST00000429411 RTN4RL2Q86UN3 420 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 C2CD4CQ8TF44 421 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 ROBO4Q8WZ75 1007 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 DDIT4LQ96D03 193 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 TMEM59Q9BXS4 323 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 RIMS4Q9H426 269 aaPredicted RBP7.18□□□□□ -1.26
HPS4-205ENST00000429411 GPR84Q9NQS5 396 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 PCDHB16Q9NRJ7 776 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 R4GMQ9 66 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 A0A0A6YYH2 397 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 IGKV1D-43A0A0B4J1Z2 117 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 TRBV5-5A0A0J9YX44 114 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 A6NJ64 397 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 ABHD16AO95870 558 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 SERPINA5P05154 406 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 UBBP0CG47 229 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 UBCP0CG48 685 aaKnown RBP7.18□□□□□ -1.26
HPS4-205ENST00000429411 SNTB1Q13884 538 aaKnown RBP7.18□□□□□ -1.26
HPS4-205ENST00000429411 NR0B2Q15466 257 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 NHLRC3Q5JS37 347 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 LYSMD4Q5XG99 296 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.18□□□□□ -1.26
HPS4-205ENST00000429411 CLEC1AQ8NC01 280 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 NEK7Q8TDX7 302 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 DTD1Q8TEA8 209 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 SOX7Q9BT81 388 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 KLK13Q9UKR3 277 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 SLC5A6Q9Y289 635 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 FAM230AA0A1W2PPH8 454 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 RFPL4AA6NLU0 287 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 RFPL4AL1F8VTS6 287 aa7.18□□□□□ -1.26
HPS4-205ENST00000429411 SULT2B1O00204 365 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms