RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 C5orf67F2Z3F1 127 aa11.08□□□□□ -0.64
CDH3-202ENST00000429102 MS4A18H0YCH9 400 aa11.08□□□□□ -0.64
CDH3-202ENST00000429102 ADH6P28332 368 aa11.08□□□□□ -0.64
CDH3-202ENST00000429102 ZNF121P58317 390 aaPredicted RBP11.08□□□□□ -0.64
CDH3-202ENST00000429102 MEF2DQ14814 521 aa11.08□□□□□ -0.64
CDH3-202ENST00000429102 MPPED2Q15777 294 aa11.08□□□□□ -0.64
CDH3-202ENST00000429102 ISXQ2M1V0 245 aa11.08□□□□□ -0.64
CDH3-202ENST00000429102 MS4A18Q3C1V0 323 aa11.08□□□□□ -0.64
CDH3-202ENST00000429102 PLAC9Q5JTB6 97 aa11.08□□□□□ -0.64
CDH3-202ENST00000429102 RPS4Y2Q8TD47 263 aa11.08□□□□□ -0.64
CDH3-202ENST00000429102 PIK3IP1Q96FE7 263 aa11.08□□□□□ -0.64
CDH3-202ENST00000429102 EIF5A2Q9GZV4 153 aaKnown RBP11.08□□□□□ -0.64
CDH3-202ENST00000429102 BARX1Q9HBU1 254 aaPredicted RBP11.08□□□□□ -0.64
CDH3-202ENST00000429102 ZNF175Q9Y473 711 aa11.08□□□□□ -0.64
CDH3-202ENST00000429102 RALGAPA1Q6GYQ0 2036 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 SSX5O60225 188 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 TXNDC12O95881 172 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 MUC1P15941 1255 aaPredicted RBP11.07□□□□□ -0.64
CDH3-202ENST00000429102 SLC6A8P48029 635 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 ANKRD55Q3KP44 614 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 TEX30Q5JUR7 227 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 SLC22A24Q8N4F4 322 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 RXFP4Q8TDU9 374 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 MITD1Q8WV92 249 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 GPHA2Q96T91 129 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 ESRP2Q9H6T0 727 aaKnown RBP11.07□□□□□ -0.64
CDH3-202ENST00000429102 RHOFQ9HBH0 211 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 AMDHD2Q9Y303 409 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 ASPMQ8IZT6 3477 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 SHANK1Q9Y566 2161 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 NCOR1O75376 2440 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 PNLIPRP2P54317 469 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 TMEM176BQ3YBM2 270 aaPredicted RBP11.07□□□□□ -0.64
CDH3-202ENST00000429102 KIAA0895LQ68EN5 471 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 ADAM5Q6NVV9 412 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 GRINAQ7Z429 371 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 OR4A4PQ8NGN8 299 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 ZNF519Q8TB69 540 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 SECTM1Q8WVN6 248 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 SLC39A7Q92504 469 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 METTL7AQ9H8H3 244 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 DIDO1Q9BTC0 2240 aaKnown RBP11.07□□□□□ -0.64
CDH3-202ENST00000429102 FRG2CA6NGY1 282 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 FAHP16930 419 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 IAH1Q2TAA2 248 aaPredicted RBP11.07□□□□□ -0.64
CDH3-202ENST00000429102 PHLDA2Q53GA4 152 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 RBMS3Q6XE24 437 aaKnown RBP11.07□□□□□ -0.64
CDH3-202ENST00000429102 PGAP1Q75T13 922 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 C6orf201Q7Z4U5 140 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 TERB2Q8NHR7 220 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 PHOSPHO2Q8TCD6 241 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 RNF141Q8WVD5 230 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 RNF126Q9BV68 326 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 FAM117AQ9C073 453 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 C1orf198Q9H425 327 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 C5orf66Q9H5L9 145 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 CA14Q9ULX7 337 aa11.07□□□□□ -0.64
CDH3-202ENST00000429102 ZDBF2Q9HCK1 2354 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 A0A0A6YYD4 124 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 ARPC4-TTLL3A0A0A6YYG9 625 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 GPR85P60893 370 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 PEA15Q15121 130 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 CHRFAM7AQ494W8 412 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 PDZD11Q5EBL8 140 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 H1FNTQ75WM6 255 aaPredicted RBP11.06□□□□□ -0.64
CDH3-202ENST00000429102 CDC6Q99741 560 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 ZNF581Q9P0T4 197 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 RCL1Q9Y2P8 373 aaKnown RBP11.06□□□□□ -0.64
CDH3-202ENST00000429102 TTLL8A6PVC2 850 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 GDF9O60383 454 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 WDPCPO95876 746 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 DBHP09172 617 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 PATE4P0C8F1 98 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 PNLIPP16233 465 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 OMGP23515 440 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 CPT2P23786 658 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 NOVA1P51513 510 aaKnown RBP11.06□□□□□ -0.64
CDH3-202ENST00000429102 MECP2P51608 486 aaKnown RBP11.06□□□□□ -0.64
CDH3-202ENST00000429102 HNF4GQ14541 408 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 FAM166AQ6J272 317 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 RAB11FIP2Q7L804 512 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 SUMF1Q8NBK3 374 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 HSD17B11Q8NBQ5 300 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 TSTD1Q8NFU3 115 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 ST7LQ8TDW4 575 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 PGAM5Q96HS1 289 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 SULT4A1Q9BR01 284 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 RBM24Q9BX46 236 aaKnown RBP11.06□□□□□ -0.64
CDH3-202ENST00000429102 FGF21Q9NSA1 209 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 UQCC1Q9NVA1 299 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 RFNGQ9Y644 331 aa11.06□□□□□ -0.64
CDH3-202ENST00000429102 FAM230AA0A1W2PPH8 454 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 VSTM2BA6NLU5 285 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 ARG1P05089 322 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 ZNF813Q6ZN06 617 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 CPEB2Q7Z5Q1 589 aaKnown RBP11.05□□□□□ -0.64
CDH3-202ENST00000429102 TRBV11-1A0A0K0K1C0 115 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 ALG1L2C9J202 215 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 FCGR2AP12318 317 aa11.05□□□□□ -0.64
CDH3-202ENST00000429102 GUCA1AP43080 201 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms