RNA–Protein interactions for RNA: ENST00000429035.1

SDC1-204, Transcript of syndecan 1, humanhuman

TSL 3

Gene SDC1, Length 646 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-204ENST00000429035 EIF2B1Q14232 305 aaKnown RBP12.01□□□□□ -0.49
SDC1-204ENST00000429035 PDCD1Q15116 288 aa12.01□□□□□ -0.49
SDC1-204ENST00000429035 DUX4L9Q6RFH8 374 aaPredicted RBP12.01□□□□□ -0.49
SDC1-204ENST00000429035 CYP2R1Q6VVX0 501 aa12.01□□□□□ -0.49
SDC1-204ENST00000429035 FGFRL1Q8N441 504 aa12.01□□□□□ -0.49
SDC1-204ENST00000429035 SPERTQ8NA61 448 aa12.01□□□□□ -0.49
SDC1-204ENST00000429035 ZNF511Q8NB15 262 aa12.01□□□□□ -0.49
SDC1-204ENST00000429035 AQP11Q8NBQ7 271 aa12.01□□□□□ -0.49
SDC1-204ENST00000429035 OR6N2Q8NGY6 317 aa12.01□□□□□ -0.49
SDC1-204ENST00000429035 TBC1D15Q8TC07 691 aa12.01□□□□□ -0.49
SDC1-204ENST00000429035 SSMEM1Q8WWF3 244 aa12.01□□□□□ -0.49
SDC1-204ENST00000429035 OTULINQ96BN8 352 aa12.01□□□□□ -0.49
SDC1-204ENST00000429035 TRIM15Q9C019 465 aa12.01□□□□□ -0.49
SDC1-204ENST00000429035 IL1RAPQ9NPH3 570 aa12.01□□□□□ -0.49
SDC1-204ENST00000429035 DNAJB11Q9UBS4 358 aa12.01□□□□□ -0.49
SDC1-204ENST00000429035 DUX4Q9UBX2 424 aa12.01□□□□□ -0.49
SDC1-204ENST00000429035 LYVE1Q9Y5Y7 322 aa12.01□□□□□ -0.49
SDC1-204ENST00000429035 WNK1Q9H4A3 2382 aa12.01□□□□□ -0.49
SDC1-204ENST00000429035 PKD1L1Q8TDX9 2849 aa12□□□□□ -0.49
SDC1-204ENST00000429035 A0A0U1RQK1 487 aa12□□□□□ -0.49
SDC1-204ENST00000429035 CLPSL1A2RUU4 121 aa12□□□□□ -0.49
SDC1-204ENST00000429035 ZNF593O00488 134 aaPredicted RBP12□□□□□ -0.49
SDC1-204ENST00000429035 NDUFA2O43678 99 aa12□□□□□ -0.49
SDC1-204ENST00000429035 IGHV4-59P01825 116 aa12□□□□□ -0.49
SDC1-204ENST00000429035 OTX1P32242 354 aaPredicted RBP12□□□□□ -0.49
SDC1-204ENST00000429035 GRK5P34947 590 aa12□□□□□ -0.49
SDC1-204ENST00000429035 GNALP38405 381 aa12□□□□□ -0.49
SDC1-204ENST00000429035 ELF3P78545 371 aaPredicted RBP12□□□□□ -0.49
SDC1-204ENST00000429035 PRB3Q04118 309 aaPredicted RBP12□□□□□ -0.49
SDC1-204ENST00000429035 IKZF1Q13422 519 aa12□□□□□ -0.49
SDC1-204ENST00000429035 PCK2Q16822 640 aa12□□□□□ -0.49
SDC1-204ENST00000429035 C16orf89Q6UX73 402 aa12□□□□□ -0.49
SDC1-204ENST00000429035 FAM57BQ71RH2 274 aa12□□□□□ -0.49
SDC1-204ENST00000429035 DPY19L4Q7Z388 723 aa12□□□□□ -0.49
SDC1-204ENST00000429035 VMO1Q7Z5L0 202 aa12□□□□□ -0.49
SDC1-204ENST00000429035 ERI1Q8IV48 349 aaKnown RBP12□□□□□ -0.49
SDC1-204ENST00000429035 DEFB107AQ8IZN7 70 aa12□□□□□ -0.49
SDC1-204ENST00000429035 TMEM86BQ8N661 226 aa12□□□□□ -0.49
SDC1-204ENST00000429035 PLPP7Q8NBV4 271 aa12□□□□□ -0.49
SDC1-204ENST00000429035 OR4Q3Q8NH05 313 aa12□□□□□ -0.49
SDC1-204ENST00000429035 UBE2FQ969M7 185 aa12□□□□□ -0.49
SDC1-204ENST00000429035 REEP6Q96HR9 211 aa12□□□□□ -0.49
SDC1-204ENST00000429035 CCL13Q99616 98 aa12□□□□□ -0.49
SDC1-204ENST00000429035 PAPOLGQ9BWT3 736 aaKnown RBP12□□□□□ -0.49
SDC1-204ENST00000429035 SIRPDQ9H106 197 aa12□□□□□ -0.49
SDC1-204ENST00000429035 PRDM13Q9H4Q3 707 aa12□□□□□ -0.49
SDC1-204ENST00000429035 BRD7Q9NPI1 651 aa12□□□□□ -0.49
SDC1-204ENST00000429035 PDP1Q9P0J1 537 aaPredicted RBP12□□□□□ -0.49
SDC1-204ENST00000429035 POMT1Q9Y6A1 747 aa12□□□□□ -0.49
SDC1-204ENST00000429035 CMYA5Q8N3K9 4069 aa11.99□□□□□ -0.49
SDC1-204ENST00000429035 A0A1W2PRD5 423 aa11.99□□□□□ -0.49
SDC1-204ENST00000429035 A0A1W2PRF3 423 aa11.99□□□□□ -0.49
SDC1-204ENST00000429035 A0A1W2PRM7 423 aa11.99□□□□□ -0.49
SDC1-204ENST00000429035 DHRS12A0PJE2 317 aa11.99□□□□□ -0.49
SDC1-204ENST00000429035 M0QZ24 198 aa11.99□□□□□ -0.49
SDC1-204ENST00000429035 GPR137BO60478 399 aa11.99□□□□□ -0.49
SDC1-204ENST00000429035 NDUFA7O95182 113 aa11.99□□□□□ -0.49
SDC1-204ENST00000429035 PTBP3O95758 552 aaKnown RBP11.99□□□□□ -0.49
SDC1-204ENST00000429035 IFNGP01579 166 aa11.99□□□□□ -0.49
SDC1-204ENST00000429035 SPI1P17947 270 aa11.99□□□□□ -0.49
SDC1-204ENST00000429035 ATP6V1B2P21281 511 aa11.99□□□□□ -0.49
SDC1-204ENST00000429035 SLC15A1P46059 708 aa11.99□□□□□ -0.49
SDC1-204ENST00000429035 GRB2P62993 217 aaKnown RBP11.99□□□□□ -0.49
SDC1-204ENST00000429035 MICBQ29980 383 aa11.99□□□□□ -0.49
SDC1-204ENST00000429035 WDR38Q5JTN6 314 aa11.99□□□□□ -0.49
SDC1-204ENST00000429035 RASSF6Q6ZTQ3 369 aa11.99□□□□□ -0.49
SDC1-204ENST00000429035 SLC16A9Q7RTY1 509 aa11.99□□□□□ -0.49
SDC1-204ENST00000429035 CPLX4Q7Z7G2 160 aa11.99□□□□□ -0.49
SDC1-204ENST00000429035 WDR86Q86TI4 376 aa11.99□□□□□ -0.49
SDC1-204ENST00000429035 FAM216BQ8N7L0 139 aa11.99□□□□□ -0.49
SDC1-204ENST00000429035 H1FXQ92522 213 aaKnown RBP11.99□□□□□ -0.49
SDC1-204ENST00000429035 SEMA6AQ9H2E6 1030 aa11.99□□□□□ -0.49
SDC1-204ENST00000429035 SIRT7Q9NRC8 400 aa11.99□□□□□ -0.49
SDC1-204ENST00000429035 CD300AQ9UGN4 299 aa11.99□□□□□ -0.49
SDC1-204ENST00000429035 TAGLN3Q9UI15 199 aa11.99□□□□□ -0.49
SDC1-204ENST00000429035 FAM96BQ9Y3D0 163 aa11.99□□□□□ -0.49
SDC1-204ENST00000429035 RNF114Q9Y508 228 aa11.99□□□□□ -0.49
SDC1-204ENST00000429035 U3KQV3 271 aa11.99□□□□□ -0.49
SDC1-204ENST00000429035 BTBD17A6NE02 478 aa11.98□□□□□ -0.49
SDC1-204ENST00000429035 RIIAD1A6NNX1 92 aa11.98□□□□□ -0.49
SDC1-204ENST00000429035 TIMM23O14925 209 aa11.98□□□□□ -0.49
SDC1-204ENST00000429035 SNX3O60493 162 aa11.98□□□□□ -0.49
SDC1-204ENST00000429035 FCN3O75636 299 aa11.98□□□□□ -0.49
SDC1-204ENST00000429035 KRT36O76013 467 aa11.98□□□□□ -0.49
SDC1-204ENST00000429035 GASTP01350 101 aa11.98□□□□□ -0.49
SDC1-204ENST00000429035 ZNF3P17036 446 aa11.98□□□□□ -0.49
SDC1-204ENST00000429035 TEX36Q5VZQ5 186 aa11.98□□□□□ -0.49
SDC1-204ENST00000429035 SLC36A1Q7Z2H8 476 aa11.98□□□□□ -0.49
SDC1-204ENST00000429035 LINC00471Q8N535 108 aa11.98□□□□□ -0.49
SDC1-204ENST00000429035 OR2T33Q8NG76 320 aa11.98□□□□□ -0.49
SDC1-204ENST00000429035 DYRK2Q92630 601 aa11.98□□□□□ -0.49
SDC1-204ENST00000429035 SEH1LQ96EE3 360 aa11.98□□□□□ -0.49
SDC1-204ENST00000429035 PGAM5Q96HS1 289 aa11.98□□□□□ -0.49
SDC1-204ENST00000429035 DDOQ99489 341 aa11.98□□□□□ -0.49
SDC1-204ENST00000429035 MED20Q9H944 212 aa11.98□□□□□ -0.49
SDC1-204ENST00000429035 ARL8BQ9NVJ2 186 aa11.98□□□□□ -0.49
SDC1-204ENST00000429035 IL20Q9NYY1 176 aa11.98□□□□□ -0.49
SDC1-204ENST00000429035 RPUSD1Q9UJJ7 312 aaKnown RBP11.98□□□□□ -0.49
SDC1-204ENST00000429035 SAMHD1Q9Y3Z3 626 aaKnown RBP11.98□□□□□ -0.49
SDC1-204ENST00000429035 hCG_38984A0A1B0GV85 526 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms