RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 TMEM88BA6NKF7 163 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 LEFTY2O00292 366 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 TCAPO15273 167 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 ADAP1O75689 374 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 OR5AC1P0C628 307 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 ZNF17P17021 662 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 TMEM33P57088 247 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 CHAF1BQ13112 559 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 UNQ6494/PRO21346Q6UXR6 183 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 ADAMTSL4Q6UY14 1074 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 ZNF610Q8N9Z0 462 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 VSTM2LQ96N03 204 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 COMMD4Q9H0A8 199 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 ZMAT3Q9HA38 289 aaKnown RBP4.57□□□□□ -1.68
RIF1-203ENST00000428287 ABT1Q9ULW3 272 aaKnown RBP4.57□□□□□ -1.68
RIF1-203ENST00000428287 KLHDC2Q9Y2U9 406 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 YIPF1Q9Y548 306 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 METTL15P1P0C7V9 234 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 GALNSP34059 522 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 HRH1P35367 487 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 KIR3DL2P43630 455 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 CLINT1Q14677 625 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 SLC17A1Q14916 467 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 MLF2Q15773 248 aaPredicted RBP4.57□□□□□ -1.68
RIF1-203ENST00000428287 NCMAPQ5T1S8 102 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 SLC25A26Q70HW3 274 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 OR4S1Q8NGB4 309 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 OR8D1Q8WZ84 308 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 OR10C1Q96KK4 312 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 MOGAT1Q96PD6 335 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 TGM7Q96PF1 710 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 LYRM4Q9HD34 91 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 LSM7Q9UK45 103 aaKnown RBP4.57□□□□□ -1.68
RIF1-203ENST00000428287 KLK13Q9UKR3 277 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 RELNP78509 3460 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 DAOP14920 347 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 LBX1P52954 281 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 OPN5Q6U736 354 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 TGIF2LXQ8IUE1 241 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 FGGYQ96C11 551 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 NOL4LQ96MY1 436 aaPredicted RBP4.57□□□□□ -1.68
RIF1-203ENST00000428287 TSSK2Q96PF2 358 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 VN1R3Q9BXE9 311 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 SNHG12Q9BXW3 62 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 C6orf106Q9H6K1 298 aaPredicted RBP4.57□□□□□ -1.68
RIF1-203ENST00000428287 HHLA2Q9UM44 414 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 A0A1B0GU03 582 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 CCSO14618 274 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 MED6O75586 246 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 EMDP50402 254 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 ARL6IP1Q15041 203 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 FNDC7Q5VTL7 733 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 ASTLQ6HA08 431 aaPredicted RBP4.57□□□□□ -1.68
RIF1-203ENST00000428287 Q6ZRG5 221 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 GPR137CQ8N3F9 429 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 ZNF383Q8NA42 475 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 MVB12AQ96EY5 273 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 RGCCQ9H4X1 137 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 RNF181Q9P0P0 153 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 CBY1Q9Y3M2 126 aa4.57□□□□□ -1.68
RIF1-203ENST00000428287 ETV2O00321 342 aaPredicted RBP4.56□□□□□ -1.68
RIF1-203ENST00000428287 TNFSF14O43557 240 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 DEDDO75618 318 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 PTGER1P34995 402 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 APOBEC1P41238 236 aaKnown RBP4.56□□□□□ -1.68
RIF1-203ENST00000428287 FKBP1BP68106 108 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 ZNF74Q16587 644 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 LRRC73Q5JTD7 316 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 CARFQ8N187 725 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 OR4C3Q8NH37 302 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 GAL3ST3Q96A11 431 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 MEGF10Q96KG7 1140 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 MMP25Q9NPA2 562 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 SLCO1B1Q9Y6L6 691 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 FITM1A5D6W6 292 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 URADA6NGE7 173 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 NTHL1P78549 312 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 EIF3IQ13347 325 aaKnown RBP4.56□□□□□ -1.68
RIF1-203ENST00000428287 RSU1Q15404 277 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 DPPA2Q7Z7J5 298 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 ZAR1Q86SH2 424 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 ARL14Q8N4G2 192 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 FOXD3Q9UJU5 478 aaPredicted RBP4.56□□□□□ -1.68
RIF1-203ENST00000428287 OSGIN2Q9Y236 505 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 MXRA5Q9NR99 2828 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 CELSR2Q9HCU4 2923 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 IGKV1D-42A0A075B6H8 117 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 CCL15-CCL14A0A0B4J2E2 113 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 FTCDNL1E5RQL4 147 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 PEX12O00623 359 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 SRSF10O75494 262 aaKnown RBP4.56□□□□□ -1.68
RIF1-203ENST00000428287 ASGR1P07306 291 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 TNFRSF9Q07011 255 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 RAB32Q13637 225 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 CCL15Q16663 113 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 PRICKLE4Q2TBC4 344 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 OR2A2Q6IF42 318 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 RPUSD3Q6P087 351 aaKnown RBP4.56□□□□□ -1.68
RIF1-203ENST00000428287 SPSB3Q6PJ21 355 aa4.56□□□□□ -1.68
RIF1-203ENST00000428287 ST7LQ8TDW4 575 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms