RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 MED12LQ86YW9 2145 aa12.55□□□□□ -0.4
CDK3-201ENST00000425876 ARHGAP21Q5T5U3 1957 aa12.54□□□□□ -0.4
CDK3-201ENST00000425876 LINC00854A0A1B0GVQ3 168 aa12.54□□□□□ -0.4
CDK3-201ENST00000425876 GGT3PA6NGU5 568 aa12.54□□□□□ -0.4
CDK3-201ENST00000425876 XRCC2O43543 280 aa12.54□□□□□ -0.4
CDK3-201ENST00000425876 SSX4O60224 188 aa12.54□□□□□ -0.4
CDK3-201ENST00000425876 PTGER4P35408 488 aa12.54□□□□□ -0.4
CDK3-201ENST00000425876 EFNB2P52799 333 aa12.54□□□□□ -0.4
CDK3-201ENST00000425876 UCNP55089 124 aa12.54□□□□□ -0.4
CDK3-201ENST00000425876 TAS2R20P59543 309 aa12.54□□□□□ -0.4
CDK3-201ENST00000425876 RAB1AP62820 205 aa12.54□□□□□ -0.4
CDK3-201ENST00000425876 DGCR2P98153 550 aa12.54□□□□□ -0.4
CDK3-201ENST00000425876 PLP2Q04941 152 aa12.54□□□□□ -0.4
CDK3-201ENST00000425876 RIPPLY1Q0D2K3 151 aa12.54□□□□□ -0.4
CDK3-201ENST00000425876 PLA2G7Q13093 441 aa12.54□□□□□ -0.4
CDK3-201ENST00000425876 TBR1Q16650 682 aa12.54□□□□□ -0.4
CDK3-201ENST00000425876 IZUMO1Q8IYV9 350 aa12.54□□□□□ -0.4
CDK3-201ENST00000425876 C9orf106Q8NAJ2 232 aa12.54□□□□□ -0.4
CDK3-201ENST00000425876 SEMA6DQ8NFY4 1073 aa12.54□□□□□ -0.4
CDK3-201ENST00000425876 AKAP1Q92667 903 aaKnown RBP eCLIP12.54□□□□□ -0.4
CDK3-201ENST00000425876 PHF21AQ96BD5 680 aa12.54□□□□□ -0.4
CDK3-201ENST00000425876 ABHD17AQ96GS6 310 aa12.54□□□□□ -0.4
CDK3-201ENST00000425876 C7orf50Q9BRJ6 194 aaKnown RBP12.54□□□□□ -0.4
CDK3-201ENST00000425876 B3GNT2Q9NY97 397 aa12.54□□□□□ -0.4
CDK3-201ENST00000425876 RAB22AQ9UL26 194 aa12.54□□□□□ -0.4
CDK3-201ENST00000425876 PIGLQ9Y2B2 252 aa12.54□□□□□ -0.4
CDK3-201ENST00000425876 RBMX2Q9Y388 322 aaKnown RBP12.54□□□□□ -0.4
CDK3-201ENST00000425876 PRRC2CQ9Y520 2896 aaKnown RBP12.54□□□□□ -0.4
CDK3-201ENST00000425876 ANKRD11Q6UB99 2663 aaPredicted RBP12.54□□□□□ -0.4
CDK3-201ENST00000425876 LOC100509620A0A075B734 347 aa12.53□□□□□ -0.4
CDK3-201ENST00000425876 IGKV1-9A0A0C4DH69 117 aa12.53□□□□□ -0.4
CDK3-201ENST00000425876 CIB4A0PJX0 185 aa12.53□□□□□ -0.4
CDK3-201ENST00000425876 CRHP06850 196 aa12.53□□□□□ -0.4
CDK3-201ENST00000425876 FAM157BP0CG42 384 aa12.53□□□□□ -0.4
CDK3-201ENST00000425876 TMIGD3P0DMS9 266 aaPredicted RBP12.53□□□□□ -0.4
CDK3-201ENST00000425876 CD79AP11912 226 aa12.53□□□□□ -0.4
CDK3-201ENST00000425876 HOXB1P14653 301 aaPredicted RBP12.53□□□□□ -0.4
CDK3-201ENST00000425876 KIR2DL2P43627 348 aaPredicted RBP12.53□□□□□ -0.4
CDK3-201ENST00000425876 QRFPP83859 136 aa12.53□□□□□ -0.4
CDK3-201ENST00000425876 DYRK1AQ13627 763 aa12.53□□□□□ -0.4
CDK3-201ENST00000425876 ZBTB37Q5TC79 503 aa12.53□□□□□ -0.4
CDK3-201ENST00000425876 Q6ZT83 130 aa12.53□□□□□ -0.4
CDK3-201ENST00000425876 ENKURQ8TC29 256 aa12.53□□□□□ -0.4
CDK3-201ENST00000425876 NEDD4LQ96PU5 975 aa12.53□□□□□ -0.4
CDK3-201ENST00000425876 NEK6Q9HC98 313 aa12.53□□□□□ -0.4
CDK3-201ENST00000425876 hCG_38984A0A1B0GV85 526 aa12.52□□□□□ -0.4
CDK3-201ENST00000425876 MBD3L4A6NDZ8 208 aaPredicted RBP12.52□□□□□ -0.4
CDK3-201ENST00000425876 MBD3L3A6NE82 208 aaPredicted RBP12.52□□□□□ -0.4
CDK3-201ENST00000425876 ZNF503-AS2A6NEH8 195 aa12.52□□□□□ -0.4
CDK3-201ENST00000425876 MBD3L5A6NJ08 208 aaPredicted RBP12.52□□□□□ -0.4
CDK3-201ENST00000425876 WDR1O75083 606 aa12.52□□□□□ -0.4
CDK3-201ENST00000425876 SCGNO76038 276 aa12.52□□□□□ -0.4
CDK3-201ENST00000425876 HCKP08631 526 aa12.52□□□□□ -0.4
CDK3-201ENST00000425876 CD3GP09693 182 aa12.52□□□□□ -0.4
CDK3-201ENST00000425876 UBBP0CG47 229 aa12.52□□□□□ -0.4
CDK3-201ENST00000425876 FAHP16930 419 aa12.52□□□□□ -0.4
CDK3-201ENST00000425876 STOMP27105 288 aa12.52□□□□□ -0.4
CDK3-201ENST00000425876 ALDH3B1P43353 468 aa12.52□□□□□ -0.4
CDK3-201ENST00000425876 KIR2DL3P43628 341 aa12.52□□□□□ -0.4
CDK3-201ENST00000425876 OR8B8Q15620 311 aa12.52□□□□□ -0.4
CDK3-201ENST00000425876 EIF2S3LQ2VIR3 472 aaKnown RBP12.52□□□□□ -0.4
CDK3-201ENST00000425876 TBRG1Q3YBR2 411 aa12.52□□□□□ -0.4
CDK3-201ENST00000425876 RAB12Q6IQ22 244 aa12.52□□□□□ -0.4
CDK3-201ENST00000425876 OR2W3Q7Z3T1 314 aa12.52□□□□□ -0.4
CDK3-201ENST00000425876 GCNT2Q8N0V5 402 aa12.52□□□□□ -0.4
CDK3-201ENST00000425876 CADM3Q8N126 398 aa12.52□□□□□ -0.4
CDK3-201ENST00000425876 TOMM5Q8N4H5 51 aa12.52□□□□□ -0.4
CDK3-201ENST00000425876 OR2AE1Q8NHA4 323 aa12.52□□□□□ -0.4
CDK3-201ENST00000425876 MBD3L2Q8NHZ7 208 aaPredicted RBP12.52□□□□□ -0.4
CDK3-201ENST00000425876 FCAMRQ8WWV6 532 aa12.52□□□□□ -0.4
CDK3-201ENST00000425876 SPSB1Q96BD6 273 aa12.52□□□□□ -0.4
CDK3-201ENST00000425876 NOX3Q9HBY0 568 aa12.52□□□□□ -0.4
CDK3-201ENST00000425876 PLSCR4Q9NRQ2 329 aa12.52□□□□□ -0.4
CDK3-201ENST00000425876 GHRLQ9UBU3 117 aa12.52□□□□□ -0.4
CDK3-201ENST00000425876 FAM240BA0A1B0GVZ2 78 aa12.52□□□□□ -0.41
CDK3-201ENST00000425876 METTL21EPA6NDL7 271 aa12.52□□□□□ -0.41
CDK3-201ENST00000425876 CENPXA8MT69 81 aa12.52□□□□□ -0.41
CDK3-201ENST00000425876 ECDO95905 644 aaPredicted RBP12.52□□□□□ -0.41
CDK3-201ENST00000425876 SERPINA5P05154 406 aa12.52□□□□□ -0.41
CDK3-201ENST00000425876 HOXD4P09016 255 aaPredicted RBP12.52□□□□□ -0.41
CDK3-201ENST00000425876 EDN3P14138 238 aa12.52□□□□□ -0.41
CDK3-201ENST00000425876 ACKR3P25106 362 aa12.52□□□□□ -0.41
CDK3-201ENST00000425876 GDNFP39905 211 aa12.52□□□□□ -0.41
CDK3-201ENST00000425876 GSK3AP49840 483 aa12.52□□□□□ -0.41
CDK3-201ENST00000425876 TMPRSS3P57727 454 aa12.52□□□□□ -0.41
CDK3-201ENST00000425876 AP3S2P59780 193 aa12.52□□□□□ -0.41
CDK3-201ENST00000425876 FAM3AP98173 230 aa12.52□□□□□ -0.41
CDK3-201ENST00000425876 KLF9Q13886 244 aaPredicted RBP12.52□□□□□ -0.41
CDK3-201ENST00000425876 GPR176Q14439 515 aa12.52□□□□□ -0.41
CDK3-201ENST00000425876 UBE2V2Q15819 145 aa12.52□□□□□ -0.41
CDK3-201ENST00000425876 FAM189A2Q15884 450 aa12.52□□□□□ -0.41
CDK3-201ENST00000425876 GSG1Q2KHT4 349 aa12.52□□□□□ -0.41
CDK3-201ENST00000425876 TMEM42Q69YG0 159 aa12.52□□□□□ -0.41
CDK3-201ENST00000425876 ZNF324BQ6AW86 544 aaPredicted RBP12.52□□□□□ -0.41
CDK3-201ENST00000425876 ZNF585AQ6P3V2 769 aa12.52□□□□□ -0.41
CDK3-201ENST00000425876 FAM180AQ6UWF9 173 aa12.52□□□□□ -0.41
CDK3-201ENST00000425876 BIVMQ86UB2 503 aa12.52□□□□□ -0.41
CDK3-201ENST00000425876 ANGPTL5Q86XS5 388 aa12.52□□□□□ -0.41
CDK3-201ENST00000425876 C1orf162Q8NEQ5 155 aaPredicted RBP12.52□□□□□ -0.41
CDK3-201ENST00000425876 OR52I2Q8NH67 350 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms