RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 OTPQ5XKR4 325 aa13.48□□□□□ -0.25
C9orf3-204ENST00000424143 GLIPR1L1Q6UWM5 242 aa13.48□□□□□ -0.25
C9orf3-204ENST00000424143 Q6ZSR3 168 aa13.48□□□□□ -0.25
C9orf3-204ENST00000424143 LINC00346Q8IVM7 164 aa13.48□□□□□ -0.25
C9orf3-204ENST00000424143 OR10S1Q8NGN2 331 aa13.48□□□□□ -0.25
C9orf3-204ENST00000424143 SFT2D1Q8WV19 159 aa13.48□□□□□ -0.25
C9orf3-204ENST00000424143 USB1Q9BQ65 265 aaKnown RBP13.48□□□□□ -0.25
C9orf3-204ENST00000424143 TMEM59Q9BXS4 323 aa13.48□□□□□ -0.25
C9orf3-204ENST00000424143 ARV1Q9H2C2 271 aa13.48□□□□□ -0.25
C9orf3-204ENST00000424143 DECR2Q9NUI1 292 aa13.48□□□□□ -0.25
C9orf3-204ENST00000424143 TIMM10BQ9Y5J6 103 aa13.48□□□□□ -0.25
C9orf3-204ENST00000424143 KPTNQ9Y664 436 aa13.48□□□□□ -0.25
C9orf3-204ENST00000424143 THADAQ6YHU6 1953 aa13.47□□□□□ -0.25
C9orf3-204ENST00000424143 IGLV3-32A0A0A0MS00 114 aa13.47□□□□□ -0.25
C9orf3-204ENST00000424143 LOC101059948A0A1B0GTJ6 334 aa13.47□□□□□ -0.25
C9orf3-204ENST00000424143 LIPT2A6NK58 231 aa13.47□□□□□ -0.25
C9orf3-204ENST00000424143 JTBO76095 146 aa13.47□□□□□ -0.25
C9orf3-204ENST00000424143 WISP1O95388 367 aa13.47□□□□□ -0.25
C9orf3-204ENST00000424143 FOSL2P15408 326 aa13.47□□□□□ -0.25
C9orf3-204ENST00000424143 NME1P15531 152 aaKnown RBP13.47□□□□□ -0.25
C9orf3-204ENST00000424143 MUC1P15941 1255 aaPredicted RBP13.47□□□□□ -0.25
C9orf3-204ENST00000424143 RAB5BP61020 215 aa13.47□□□□□ -0.25
C9orf3-204ENST00000424143 SRSF3P84103 164 aaKnown RBP13.47□□□□□ -0.25
C9orf3-204ENST00000424143 TLE3Q04726 772 aa13.47□□□□□ -0.25
C9orf3-204ENST00000424143 ANKRD55Q3KP44 614 aa13.47□□□□□ -0.25
C9orf3-204ENST00000424143 AADACL3Q5VUY0 350 aa13.47□□□□□ -0.25
C9orf3-204ENST00000424143 OPN5Q6U736 354 aa13.47□□□□□ -0.25
C9orf3-204ENST00000424143 DOK3Q7L591 496 aa13.47□□□□□ -0.25
C9orf3-204ENST00000424143 LURAP1LQ8IV03 231 aa13.47□□□□□ -0.25
C9orf3-204ENST00000424143 ZNF101Q8IZC7 436 aa13.47□□□□□ -0.25
C9orf3-204ENST00000424143 OR13C9Q8NGT0 318 aa13.47□□□□□ -0.25
C9orf3-204ENST00000424143 RXFP4Q8TDU9 374 aa13.47□□□□□ -0.25
C9orf3-204ENST00000424143 TM2D1Q9BX74 207 aa13.47□□□□□ -0.25
C9orf3-204ENST00000424143 CNTNAP3Q9BZ76 1288 aa13.47□□□□□ -0.25
C9orf3-204ENST00000424143 IGFLR1Q9H665 355 aa13.47□□□□□ -0.25
C9orf3-204ENST00000424143 OR5AC2Q9NZP5 309 aa13.47□□□□□ -0.25
C9orf3-204ENST00000424143 SUSD2Q9UGT4 822 aa13.47□□□□□ -0.25
C9orf3-204ENST00000424143 TUBD1Q9UJT1 453 aa13.47□□□□□ -0.25
C9orf3-204ENST00000424143 F5P12259 2224 aa13.47□□□□□ -0.25
C9orf3-204ENST00000424143 IGKV1D-43A0A0B4J1Z2 117 aa13.46□□□□□ -0.25
C9orf3-204ENST00000424143 LOC102725191A0A1B0GVB3 256 aa13.46□□□□□ -0.25
C9orf3-204ENST00000424143 MSGN1A6NI15 193 aa13.46□□□□□ -0.25
C9orf3-204ENST00000424143 SERPINE3A8MV23 424 aa13.46□□□□□ -0.25
C9orf3-204ENST00000424143 FAM157AC9JC47 383 aa13.46□□□□□ -0.25
C9orf3-204ENST00000424143 NAT2P11245 290 aa13.46□□□□□ -0.25
C9orf3-204ENST00000424143 FBLP22087 321 aaKnown RBP13.46□□□□□ -0.25
C9orf3-204ENST00000424143 RPL35P42766 123 aaKnown RBP13.46□□□□□ -0.25
C9orf3-204ENST00000424143 FMODQ06828 376 aa13.46□□□□□ -0.25
C9orf3-204ENST00000424143 PTCRAQ6ISU1 281 aaPredicted RBP13.46□□□□□ -0.25
C9orf3-204ENST00000424143 TTLL10Q6ZVT0 673 aa13.46□□□□□ -0.25
C9orf3-204ENST00000424143 COX15Q7KZN9 410 aa13.46□□□□□ -0.25
C9orf3-204ENST00000424143 OR13G1Q8NGZ3 307 aa13.46□□□□□ -0.25
C9orf3-204ENST00000424143 SNIP1Q8TAD8 396 aaKnown RBP13.46□□□□□ -0.25
C9orf3-204ENST00000424143 ZC3H10Q96K80 434 aaKnown RBP13.46□□□□□ -0.25
C9orf3-204ENST00000424143 NRSN2Q9GZP1 204 aa13.46□□□□□ -0.25
C9orf3-204ENST00000424143 PLEKHA2Q9HB19 425 aa13.46□□□□□ -0.25
C9orf3-204ENST00000424143 ZNF304Q9HCX3 659 aa13.46□□□□□ -0.25
C9orf3-204ENST00000424143 SLC2A4RGQ9NR83 387 aa13.46□□□□□ -0.25
C9orf3-204ENST00000424143 C1orf123Q9NWV4 160 aa13.46□□□□□ -0.25
C9orf3-204ENST00000424143 PIAS3Q9Y6X2 628 aa13.46□□□□□ -0.25
C9orf3-204ENST00000424143 LOC100509620A0A075B734 347 aa13.46□□□□□ -0.26
C9orf3-204ENST00000424143 IGLV3-1P01715 115 aa13.46□□□□□ -0.26
C9orf3-204ENST00000424143 SMIM6P0DI80 62 aa13.46□□□□□ -0.26
C9orf3-204ENST00000424143 HKR1P10072 659 aa13.46□□□□□ -0.26
C9orf3-204ENST00000424143 AMY2BP19961 511 aa13.46□□□□□ -0.26
C9orf3-204ENST00000424143 OR1D4P47884 311 aa13.46□□□□□ -0.26
C9orf3-204ENST00000424143 P2RY4P51582 365 aa13.46□□□□□ -0.26
C9orf3-204ENST00000424143 AKR1D1P51857 326 aa13.46□□□□□ -0.26
C9orf3-204ENST00000424143 SUCLG1P53597 346 aaKnown RBP13.46□□□□□ -0.26
C9orf3-204ENST00000424143 HYAL1Q12794 435 aa13.46□□□□□ -0.26
C9orf3-204ENST00000424143 ECH1Q13011 328 aa13.46□□□□□ -0.26
C9orf3-204ENST00000424143 NSDHLQ15738 373 aa13.46□□□□□ -0.26
C9orf3-204ENST00000424143 SLC25A47Q6Q0C1 308 aa13.46□□□□□ -0.26
C9orf3-204ENST00000424143 TMEM200AQ86VY9 491 aa13.46□□□□□ -0.26
C9orf3-204ENST00000424143 SLC25A43Q8WUT9 341 aaPredicted RBP13.46□□□□□ -0.26
C9orf3-204ENST00000424143 C10orf35Q96D05 121 aa13.46□□□□□ -0.26
C9orf3-204ENST00000424143 TMEM41AQ96HV5 264 aa13.46□□□□□ -0.26
C9orf3-204ENST00000424143 MRGPRX4Q96LA9 322 aa13.46□□□□□ -0.26
C9orf3-204ENST00000424143 OR10A2Q9H208 303 aa13.46□□□□□ -0.26
C9orf3-204ENST00000424143 TAF9BQ9HBM6 251 aa13.46□□□□□ -0.26
C9orf3-204ENST00000424143 SERINC1Q9NRX5 453 aa13.46□□□□□ -0.26
C9orf3-204ENST00000424143 PCNX3Q9H6A9 2034 aa13.45□□□□□ -0.26
C9orf3-204ENST00000424143 SMAD9O15198 467 aaKnown RBP13.45□□□□□ -0.26
C9orf3-204ENST00000424143 SOCS1O15524 211 aa13.45□□□□□ -0.26
C9orf3-204ENST00000424143 MPIG6BO95866 241 aa13.45□□□□□ -0.26
C9orf3-204ENST00000424143 SPP1P10451 314 aa13.45□□□□□ -0.26
C9orf3-204ENST00000424143 FKBP2P26885 142 aaKnown RBP13.45□□□□□ -0.26
C9orf3-204ENST00000424143 OR3A2P47893 321 aa13.45□□□□□ -0.26
C9orf3-204ENST00000424143 NPY4RP50391 375 aa13.45□□□□□ -0.26
C9orf3-204ENST00000424143 AKR1C2P52895 323 aa13.45□□□□□ -0.26
C9orf3-204ENST00000424143 GFERP55789 205 aa13.45□□□□□ -0.26
C9orf3-204ENST00000424143 GRB2P62993 217 aaKnown RBP13.45□□□□□ -0.26
C9orf3-204ENST00000424143 POU3F1Q03052 451 aaPredicted RBP13.45□□□□□ -0.26
C9orf3-204ENST00000424143 AKR1C1Q04828 323 aa13.45□□□□□ -0.26
C9orf3-204ENST00000424143 RAB32Q13637 225 aa13.45□□□□□ -0.26
C9orf3-204ENST00000424143 TMEM31Q5JXX7 168 aa13.45□□□□□ -0.26
C9orf3-204ENST00000424143 SLC16A14Q7RTX9 510 aa13.45□□□□□ -0.26
C9orf3-204ENST00000424143 BOLLQ8N9W6 283 aaKnown RBP13.45□□□□□ -0.26
C9orf3-204ENST00000424143 UBAC2Q8NBM4 344 aa13.45□□□□□ -0.26
C9orf3-204ENST00000424143 OR2AJ1Q8NGZ0 328 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms