RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 ZNF45Q02386 682 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 FADDQ13158 208 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 CHI3L2Q15782 390 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 LIPMQ5VYY2 423 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 CDH26Q8IXH8 852 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 Q8NA96 180 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 KLHL30-AS1Q8NEE0 82 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 DMBX1Q8NFW5 382 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 OR4C3Q8NH37 302 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 SLC7A13Q8TCU3 470 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 RASD2Q96D21 266 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 COQ10AQ96MF6 247 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 NDFIP1Q9BT67 221 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 PAIP1Q9H074 479 aaKnown RBP3.12□□□□□ -1.91
TOP2A-201ENST00000423485 RHBDL2Q9NX52 303 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 PRELID1Q9Y255 219 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 EXOSC1Q9Y3B2 195 aaKnown RBP3.12□□□□□ -1.91
TOP2A-201ENST00000423485 MUC22E2RYF6 1773 aaPredicted RBP3.12□□□□□ -1.91
TOP2A-201ENST00000423485 TRAV36DV7A0A075B6V5 113 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 LINC00862A6NCI5 91 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 B4DXG7 233 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 MCRIP1C9JLW8 97 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 LOC110117498-PIK3R3F6TDL0 507 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 NTN3O00634 580 aaPredicted RBP3.12□□□□□ -1.91
TOP2A-201ENST00000423485 BHLHE40O14503 412 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 TAAR5O14804 337 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 HCRTO43612 131 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 RHBDL1O75783 438 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 C1orf105O95561 183 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 CD8AP01732 235 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 ZNF17P17021 662 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 ADRA2CP18825 462 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 PAX6P26367 422 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 PDHA2P29803 388 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 PGM1P36871 562 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 TAS2R40P59535 323 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 DEFA1P59665 94 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 DEFA3P59666 94 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 DAZAP2Q15038 168 aaPredicted RBP3.12□□□□□ -1.91
TOP2A-201ENST00000423485 RBMS2Q15434 407 aaKnown RBP3.12□□□□□ -1.91
TOP2A-201ENST00000423485 ANKDD1AQ495B1 522 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 CDCP2Q5VXM1 449 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 ALKAL1Q6UXT8 129 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 BAIAP2L2Q6UXY1 529 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 ASCL4Q6XD76 172 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 MAVSQ7Z434 540 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 GPR141Q7Z602 305 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 WFDC3Q8IUB2 231 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 HAVCR2Q8TDQ0 301 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 PIK3R3Q92569 461 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 HAVCR1Q96D42 359 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 FOXN4Q96NZ1 517 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 LYSMD1Q96S90 227 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 PLA2G12AQ9BZM1 189 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 SEMA4CQ9C0C4 833 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 OR51I2Q9H344 312 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 CNTD2Q9H8S5 307 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 CCDC59Q9P031 241 aaKnown RBP3.12□□□□□ -1.91
TOP2A-201ENST00000423485 GMPR2Q9P2T1 348 aaKnown RBP3.12□□□□□ -1.91
TOP2A-201ENST00000423485 ADAM29Q9UKF5 820 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 SNX24Q9Y343 169 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 ARHGAP21Q5T5U3 1957 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 A0A1W2PNV4 684 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 ANTXRLA6NF34 631 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 CHST1O43916 411 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 PRAMEF4O60810 478 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 WNT2P09544 360 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 SCTP09683 121 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 PVALBP20472 110 aaPredicted RBP3.12□□□□□ -1.91
TOP2A-201ENST00000423485 CD40P25942 277 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 GNRHRP30968 328 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 UBE2IP63279 158 aaKnown RBP3.12□□□□□ -1.91
TOP2A-201ENST00000423485 ATP5G2Q06055 141 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 ZFP36L1Q07352 338 aaKnown RBP3.12□□□□□ -1.91
TOP2A-201ENST00000423485 ACSF3Q4G176 576 aaPredicted RBP3.12□□□□□ -1.91
TOP2A-201ENST00000423485 PRAMEF9Q5VWM5 478 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 HIST2H2BCQ6DN03 193 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 TRAT1Q6PIZ9 186 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 SMARCD3Q6STE5 483 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 MSANTD1Q6ZTZ1 278 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 CREB3L2Q70SY1 520 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 ZBTB46Q86UZ6 589 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 HS3ST5Q8IZT8 346 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 ITLN2Q8WWU7 325 aaPredicted RBP3.12□□□□□ -1.91
TOP2A-201ENST00000423485 ERGIC1Q969X5 290 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 UPRTQ96BW1 309 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 FYTTD1Q96QD9 318 aaKnown RBP3.12□□□□□ -1.91
TOP2A-201ENST00000423485 SLC35A5Q9BS91 424 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 C1QTNF4Q9BXJ3 329 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 KAT8Q9H7Z6 458 aaKnown RBP3.12□□□□□ -1.91
TOP2A-201ENST00000423485 PLEKHA3Q9HB20 300 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 INSIG2Q9Y5U4 225 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 TNCP24821 2201 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 PCSK5Q92824 1860 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 TRIM49D1C9J1S8 452 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 SMIM17P0DL12 118 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 NAT2P11245 290 aa3.11□□□□□ -1.91
TOP2A-201ENST00000423485 ANXA7P20073 488 aaKnown RBP3.11□□□□□ -1.91
TOP2A-201ENST00000423485 MSR1P21757 451 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms