RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 TNFAIP8O95379 198 aa14.5□□□□□ -0.09
COL7A1-202ENST00000422991 BMP4P12644 408 aa14.5□□□□□ -0.09
COL7A1-202ENST00000422991 ACKR3P25106 362 aa14.5□□□□□ -0.09
COL7A1-202ENST00000422991 MAP2K4P45985 399 aa14.5□□□□□ -0.09
COL7A1-202ENST00000422991 TAS2R43P59537 309 aa14.5□□□□□ -0.09
COL7A1-202ENST00000422991 ODF4Q2M2E3 257 aa14.5□□□□□ -0.09
COL7A1-202ENST00000422991 ZNF773Q6PK81 442 aa14.5□□□□□ -0.09
COL7A1-202ENST00000422991 Q6ZSR3 168 aa14.5□□□□□ -0.09
COL7A1-202ENST00000422991 CDH24Q86UP0 819 aa14.5□□□□□ -0.09
COL7A1-202ENST00000422991 PLPP7Q8NBV4 271 aa14.5□□□□□ -0.09
COL7A1-202ENST00000422991 BHLHE23Q8NDY6 225 aa14.5□□□□□ -0.09
COL7A1-202ENST00000422991 OR8G5Q8NG78 346 aa14.5□□□□□ -0.09
COL7A1-202ENST00000422991 PIGTQ969N2 578 aa14.5□□□□□ -0.09
COL7A1-202ENST00000422991 FAM71F1Q96KD3 344 aaPredicted RBP14.5□□□□□ -0.09
COL7A1-202ENST00000422991 CXorf56Q9H5V9 222 aa14.5□□□□□ -0.09
COL7A1-202ENST00000422991 EDARQ9UNE0 448 aa14.5□□□□□ -0.09
COL7A1-202ENST00000422991 SIRT4Q9Y6E7 314 aaPredicted RBP14.5□□□□□ -0.09
COL7A1-202ENST00000422991 PMF1-BGLAPU3KQ54 211 aa14.5□□□□□ -0.09
COL7A1-202ENST00000422991 TRBV2A0A0J9YWF9 115 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 A0A1B0GVI7 797 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 A0A1B0GWJ7 208 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 PLSCR5A0PG75 271 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 TMEM212A6NML5 194 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 OGG1O15527 345 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 DHRS3O75911 302 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 ZFPL1O95159 310 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 ISG15P05161 165 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 NAT2P11245 290 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 ATP6V1B1P15313 513 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 LIPAP38571 399 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 CDKN1AP38936 164 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 DDOSTP39656 456 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 BDH1Q02338 343 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 ACSM1Q08AH1 577 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 SPHARQ15513 63 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 ZMAT1Q5H9K5 638 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 TMEM244Q5VVB8 128 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 Q6ZR03 302 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 DOK3Q7L591 496 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 SVOPQ8N4V2 548 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 ZNF676Q8N7Q3 588 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 ZFP41Q8N8Y5 198 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 ITFG2Q969R8 447 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 SMIM19Q96E16 107 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 MSL2Q9HCI7 577 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 ACOT13Q9NPJ3 140 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 CYSLTR2Q9NS75 346 aa14.49□□□□□ -0.09
COL7A1-202ENST00000422991 CCDC168Q8NDH2 2452 aa14.48□□□□□ -0.09
COL7A1-202ENST00000422991 USF3Q68DE3 2245 aa14.48□□□□□ -0.09
COL7A1-202ENST00000422991 SYT7O43581 403 aa14.48□□□□□ -0.09
COL7A1-202ENST00000422991 ACHEP22303 614 aa14.48□□□□□ -0.09
COL7A1-202ENST00000422991 DNASE1P24855 282 aa14.48□□□□□ -0.09
COL7A1-202ENST00000422991 MAP2K3P46734 347 aa14.48□□□□□ -0.09
COL7A1-202ENST00000422991 ZNF81P51508 661 aa14.48□□□□□ -0.09
COL7A1-202ENST00000422991 MED22Q15528 200 aa14.48□□□□□ -0.09
COL7A1-202ENST00000422991 DMKNQ6E0U4 476 aaPredicted RBP14.48□□□□□ -0.09
COL7A1-202ENST00000422991 RDH10Q8IZV5 341 aa14.48□□□□□ -0.09
COL7A1-202ENST00000422991 SPARTQ8N0X7 666 aa14.48□□□□□ -0.09
COL7A1-202ENST00000422991 CSNK2A3Q8NEV1 391 aa14.48□□□□□ -0.09
COL7A1-202ENST00000422991 OR10AC1Q8NH08 325 aa14.48□□□□□ -0.09
COL7A1-202ENST00000422991 OR5AK2Q8NH90 309 aa14.48□□□□□ -0.09
COL7A1-202ENST00000422991 NINJ1Q92982 152 aa14.48□□□□□ -0.09
COL7A1-202ENST00000422991 PDCD1LG2Q9BQ51 273 aa14.48□□□□□ -0.09
COL7A1-202ENST00000422991 SLC30A2Q9BRI3 323 aa14.48□□□□□ -0.09
COL7A1-202ENST00000422991 COMMD4Q9H0A8 199 aa14.48□□□□□ -0.09
COL7A1-202ENST00000422991 MS4A5Q9H3V2 200 aa14.48□□□□□ -0.09
COL7A1-202ENST00000422991 ZNF696Q9H7X3 374 aa14.48□□□□□ -0.09
COL7A1-202ENST00000422991 ZNF701Q9NV72 531 aaPredicted RBP14.48□□□□□ -0.09
COL7A1-202ENST00000422991 MRPL15Q9P015 296 aaKnown RBP14.48□□□□□ -0.09
COL7A1-202ENST00000422991 V9GYS6 101 aa14.48□□□□□ -0.09
COL7A1-202ENST00000422991 MAP1AP78559 2803 aaPredicted RBP14.48□□□□□ -0.09
COL7A1-202ENST00000422991 AKAP9Q99996 3911 aa14.48□□□□□ -0.09
COL7A1-202ENST00000422991 DHRS7CA6NNS2 312 aa14.47□□□□□ -0.09
COL7A1-202ENST00000422991 C17orf100A8MU93 164 aa14.47□□□□□ -0.09
COL7A1-202ENST00000422991 H3BSH0 61 aa14.47□□□□□ -0.09
COL7A1-202ENST00000422991 MTRF1O75570 445 aaKnown RBP14.47□□□□□ -0.09
COL7A1-202ENST00000422991 ADH4P08319 380 aa14.47□□□□□ -0.09
COL7A1-202ENST00000422991 PAX1P15863 534 aa14.47□□□□□ -0.09
COL7A1-202ENST00000422991 PCMT1P22061 227 aa14.47□□□□□ -0.09
COL7A1-202ENST00000422991 EMX1Q04741 257 aaPredicted RBP14.47□□□□□ -0.09
COL7A1-202ENST00000422991 ZBTB37Q5TC79 503 aa14.47□□□□□ -0.09
COL7A1-202ENST00000422991 ZNF367Q7RTV3 350 aa14.47□□□□□ -0.09
COL7A1-202ENST00000422991 ZCCHC24Q8N2G6 241 aaKnown RBP14.47□□□□□ -0.09
COL7A1-202ENST00000422991 CCDC54Q8NEL0 328 aa14.47□□□□□ -0.09
COL7A1-202ENST00000422991 SEMA6DQ8NFY4 1073 aa14.47□□□□□ -0.09
COL7A1-202ENST00000422991 OR14K1Q8NGZ2 314 aa14.47□□□□□ -0.09
COL7A1-202ENST00000422991 RGP1Q92546 391 aaPredicted RBP14.47□□□□□ -0.09
COL7A1-202ENST00000422991 MBD6Q96DN6 1003 aa14.47□□□□□ -0.09
COL7A1-202ENST00000422991 PGLYRP3Q96LB9 341 aa14.47□□□□□ -0.09
COL7A1-202ENST00000422991 SORCS2Q96PQ0 1159 aa14.47□□□□□ -0.09
COL7A1-202ENST00000422991 NR1H4Q96RI1 486 aaPredicted RBP14.47□□□□□ -0.09
COL7A1-202ENST00000422991 TPK1Q9H3S4 243 aa14.47□□□□□ -0.09
COL7A1-202ENST00000422991 BEX4Q9NWD9 120 aaPredicted RBP14.47□□□□□ -0.09
COL7A1-202ENST00000422991 HHLA2Q9UM44 414 aa14.47□□□□□ -0.09
COL7A1-202ENST00000422991 CHD3Q12873 2000 aaKnown RBP14.46□□□□□ -0.09
COL7A1-202ENST00000422991 ANKRD30BLA7E2S9 258 aa14.46□□□□□ -0.09
COL7A1-202ENST00000422991 MLNRO43193 412 aa14.46□□□□□ -0.09
COL7A1-202ENST00000422991 IGHV1-46P01743 117 aa14.46□□□□□ -0.09
COL7A1-202ENST00000422991 RPSAP08865 295 aaKnown RBP14.46□□□□□ -0.09
COL7A1-202ENST00000422991 FAHP16930 419 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms