RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 CD300LBA8K4G0 201 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 CCRL2O00421 344 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 NOL3O60936 208 aaKnown RBP7.26□□□□□ -1.25
TRIM48-201ENST00000417545 GATBO75879 557 aaKnown RBP7.26□□□□□ -1.25
TRIM48-201ENST00000417545 ZFPL1O95159 310 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 LALBAP00709 142 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 IGHV3-13P01766 116 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 FAHP16930 419 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 KITLGP21583 273 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 PSMA1P25786 263 aaKnown RBP7.26□□□□□ -1.25
TRIM48-201ENST00000417545 ALDH3B1P43353 468 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 ZNF81P51508 661 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 PPP3R1P63098 170 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 FAM3AP98173 230 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 ACSM1Q08AH1 577 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 PSG7Q13046 419 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 CNN3Q15417 329 aaKnown RBP7.26□□□□□ -1.25
TRIM48-201ENST00000417545 YIF1BQ5BJH7 314 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 UBE2UQ5VVX9 321 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 PLCXD3Q63HM9 321 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 XAF1Q6GPH4 301 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 PRSS45Q7RTY3 260 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 LRP11Q86VZ4 500 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 RDH10Q8IZV5 341 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 MS4A15Q8N5U1 240 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 OR8G5Q8NG78 346 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 OR2Z1Q8NG97 314 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 OR13G1Q8NGZ3 307 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 GHSRQ92847 366 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 ITFG2Q969R8 447 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 SPSB4Q96A44 273 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 HAVCR1Q96D42 359 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 SLC22A4Q9H015 551 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 RAB1BQ9H0U4 201 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 MS4A5Q9H3V2 200 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 CXorf56Q9H5V9 222 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 ABCB9Q9NP78 766 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 EXOSC4Q9NPD3 245 aaKnown RBP7.26□□□□□ -1.25
TRIM48-201ENST00000417545 DECR2Q9NUI1 292 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 TMEM100Q9NV29 134 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 ZNF319Q9P2F9 582 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 LSM2Q9Y333 95 aaKnown RBP7.26□□□□□ -1.25
TRIM48-201ENST00000417545 ICE1Q9Y2F5 2266 aa7.26□□□□□ -1.25
TRIM48-201ENST00000417545 LOC390937A0A1W2PQ73 354 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 C5orf63A6NC05 138 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 IQCF6A8MYZ5 107 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 MAGEB3O15480 346 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 OGG1O15527 345 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 SPRY3O43610 288 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 PLPP2O43688 288 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 RGS9O75916 674 aaPredicted RBP7.25□□□□□ -1.25
TRIM48-201ENST00000417545 ISG15P05161 165 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 CPEP16870 476 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 CA6P23280 308 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 DNASE1P24855 282 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 EVX1P49640 407 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 PRDX4Q13162 271 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 GPR50Q13585 617 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 EFNB3Q15768 340 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 Q499Y3 187 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 CLVS2Q5SYC1 327 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 ZBTB37Q5TC79 503 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 DMKNQ6E0U4 476 aaPredicted RBP7.25□□□□□ -1.25
TRIM48-201ENST00000417545 MOB3CQ70IA8 216 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 ZDHHC23Q8IYP9 409 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 ZNF295-AS1Q8N0V1 137 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 LILRB1Q8NHL6 650 aaPredicted RBP7.25□□□□□ -1.25
TRIM48-201ENST00000417545 PIGTQ969N2 578 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 TMEM203Q969S6 136 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 ELMOD3Q96FG2 381 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 TRMT61AQ96FX7 289 aaKnown RBP7.25□□□□□ -1.25
TRIM48-201ENST00000417545 LYZL4Q96KX0 146 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 OPALINQ96PE5 141 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 DIRC2Q96SL1 478 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 MICU1Q9BPX6 476 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 RTL8AQ9BWD3 113 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 CACNG6Q9BXT2 260 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 EGLN1Q9GZT9 426 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 SLITRK2Q9H156 845 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 TPK1Q9H3S4 243 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 MSL2Q9HCI7 577 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 MRPL15Q9P015 296 aaKnown RBP7.25□□□□□ -1.25
TRIM48-201ENST00000417545 MYEF2Q9P2K5 600 aaKnown RBP7.25□□□□□ -1.25
TRIM48-201ENST00000417545 ZDHHC8Q9ULC8 765 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 SLC7A11Q9UPY5 501 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 MPC1Q9Y5U8 109 aa7.25□□□□□ -1.25
TRIM48-201ENST00000417545 TENM4Q6N022 2769 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 USP9XQ93008 2570 aaPredicted RBP7.24□□□□□ -1.25
TRIM48-201ENST00000417545 FLNCQ14315 2725 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 IGLV3-9A0A075B6K5 115 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 FAM221AA4D161 298 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 ANKRD61A6NGH8 418 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 A6NIN4 97 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 DHRS7CA6NNS2 312 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 ZNF850A8MQ14 1090 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 ZNF879B4DU55 563 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 GMDSO60547 372 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 INMTO95050 263 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 NRASP01111 189 aa7.24□□□□□ -1.25
TRIM48-201ENST00000417545 RAF1P04049 648 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms