RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 BTG1P62324 171 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 PAX2Q02962 417 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 MED21Q13503 144 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 TEX30Q5JUR7 227 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 FAM201AQ5SY85 155 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 C6orf141Q5SZD1 244 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 SPATC1Q76KD6 591 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 ZNF283Q8N7M2 679 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 ZNF511Q8NB15 262 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 SLC26A10Q8NG04 563 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 OR6K6Q8NGW6 343 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 ZNF420Q8TAQ5 688 aaPredicted RBP10.8□□□□□ -0.68
LINC00339-202ENST00000416769 CNIH3Q8TBE1 160 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 CNBD2Q96M20 576 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 EGLN1Q9GZT9 426 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 KCNN2Q9H2S1 579 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 PLCXD1Q9NUJ7 323 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 MRPS18AQ9NVS2 196 aaKnown RBP10.8□□□□□ -0.68
LINC00339-202ENST00000416769 MRPL22Q9NWU5 206 aaKnown RBP10.8□□□□□ -0.68
LINC00339-202ENST00000416769 EIF3KQ9UBQ5 218 aaKnown RBP10.8□□□□□ -0.68
LINC00339-202ENST00000416769 KCNG2Q9UJ96 466 aa10.8□□□□□ -0.68
LINC00339-202ENST00000416769 POLR3KQ9Y2Y1 108 aaPredicted RBP10.8□□□□□ -0.68
LINC00339-202ENST00000416769 A8MXK9 166 aa10.79□□□□□ -0.68
LINC00339-202ENST00000416769 ZNF593O00488 134 aaPredicted RBP10.79□□□□□ -0.68
LINC00339-202ENST00000416769 CST2P09228 141 aa10.79□□□□□ -0.68
LINC00339-202ENST00000416769 MSR1P21757 451 aa10.79□□□□□ -0.68
LINC00339-202ENST00000416769 MMP16P51512 607 aa10.79□□□□□ -0.68
LINC00339-202ENST00000416769 RELBQ01201 579 aa10.79□□□□□ -0.68
LINC00339-202ENST00000416769 PAX8Q06710 450 aa10.79□□□□□ -0.68
LINC00339-202ENST00000416769 DBPQ10586 325 aaPredicted RBP10.79□□□□□ -0.68
LINC00339-202ENST00000416769 POU4F2Q12837 409 aa10.79□□□□□ -0.68
LINC00339-202ENST00000416769 MOGQ16653 247 aa10.79□□□□□ -0.68
LINC00339-202ENST00000416769 PCK2Q16822 640 aa10.79□□□□□ -0.68
LINC00339-202ENST00000416769 KLHL22Q53GT1 634 aa10.79□□□□□ -0.68
LINC00339-202ENST00000416769 LAIR2Q6ISS4 152 aa10.79□□□□□ -0.68
LINC00339-202ENST00000416769 BRD3OSQ6XYD6 125 aa10.79□□□□□ -0.68
LINC00339-202ENST00000416769 SHFQ7M4L6 423 aa10.79□□□□□ -0.68
LINC00339-202ENST00000416769 SYT9Q86SS6 491 aa10.79□□□□□ -0.68
LINC00339-202ENST00000416769 LRRC28Q86X40 367 aaPredicted RBP10.79□□□□□ -0.68
LINC00339-202ENST00000416769 TIGD4Q8IY51 512 aa10.79□□□□□ -0.68
LINC00339-202ENST00000416769 OR5AS1Q8N127 324 aa10.79□□□□□ -0.68
LINC00339-202ENST00000416769 KIR3DL3Q8N743 410 aa10.79□□□□□ -0.68
LINC00339-202ENST00000416769 TMIGD2Q96BF3 282 aa10.79□□□□□ -0.68
LINC00339-202ENST00000416769 C4orf45Q96LM5 186 aa10.79□□□□□ -0.68
LINC00339-202ENST00000416769 MS4A7Q9GZW8 240 aaPredicted RBP10.79□□□□□ -0.68
LINC00339-202ENST00000416769 EXOGQ9Y2C4 368 aaKnown RBP10.79□□□□□ -0.68
LINC00339-202ENST00000416769 TVP23AA6NH52 213 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 C12orf71A8MTZ7 269 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 H0YL77 283 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 HOXA3O43365 443 aaPredicted RBP10.78□□□□□ -0.68
LINC00339-202ENST00000416769 CYB5R3P00387 301 aaPredicted RBP10.78□□□□□ -0.68
LINC00339-202ENST00000416769 MTNR1AP48039 350 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 ENTPD1P49961 510 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 PCBD1P61457 104 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 IL13RA1P78552 427 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 SLC3A1Q07837 685 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 HLXQ14774 488 aaPredicted RBP10.78□□□□□ -0.68
LINC00339-202ENST00000416769 SMN1Q16637 294 aaKnown RBP10.78□□□□□ -0.68
LINC00339-202ENST00000416769 MEP1BQ16820 701 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 DEFB112Q30KQ8 113 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 RUSC1-AS1Q66K80 236 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 SLC16A9Q7RTY1 509 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 KLHL36Q8N4N3 616 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 SPICQ8N5J4 248 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 C19orf18Q8NEA5 215 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 OR10AD1Q8NGE0 317 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 WFDC12Q8WWY7 111 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 SLC25A28Q96A46 364 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 DACT3Q96B18 629 aaPredicted RBP10.78□□□□□ -0.68
LINC00339-202ENST00000416769 CMBLQ96DG6 245 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 OR2V2Q96R30 315 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 DIRC2Q96SL1 478 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 INTS14Q96SY0 518 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 MRI1Q9BV20 369 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 CDADC1Q9BWV3 514 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 YTHDF1Q9BYJ9 559 aaKnown RBP10.78□□□□□ -0.68
LINC00339-202ENST00000416769 YIPF3Q9GZM5 350 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 WDR76Q9H967 626 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 AMBNQ9NP70 447 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 ZDHHC8Q9ULC8 765 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 STARD10Q9Y365 291 aa10.78□□□□□ -0.68
LINC00339-202ENST00000416769 IRGMA1A4Y4 181 aa10.77□□□□□ -0.69
LINC00339-202ENST00000416769 FAM181BA6NEQ2 426 aa10.77□□□□□ -0.69
LINC00339-202ENST00000416769 TMEM178BH3BS89 294 aa10.77□□□□□ -0.69
LINC00339-202ENST00000416769 CLDN34H7C241 214 aa10.77□□□□□ -0.69
LINC00339-202ENST00000416769 ICMTO60725 284 aa10.77□□□□□ -0.69
LINC00339-202ENST00000416769 ABHD16AO95870 558 aa10.77□□□□□ -0.69
LINC00339-202ENST00000416769 PLATP00750 562 aa10.77□□□□□ -0.69
LINC00339-202ENST00000416769 WNT2P09544 360 aa10.77□□□□□ -0.69
LINC00339-202ENST00000416769 CCDC159P0C7I6 412 aa10.77□□□□□ -0.69
LINC00339-202ENST00000416769 DBTP11182 482 aaKnown RBP10.77□□□□□ -0.69
LINC00339-202ENST00000416769 ATP6V1E1P36543 226 aa10.77□□□□□ -0.69
LINC00339-202ENST00000416769 SLC15A1P46059 708 aa10.77□□□□□ -0.69
LINC00339-202ENST00000416769 ZNF91Q05481 1191 aa10.77□□□□□ -0.69
LINC00339-202ENST00000416769 RAB40BQ12829 278 aa10.77□□□□□ -0.69
LINC00339-202ENST00000416769 AQP6Q13520 282 aa10.77□□□□□ -0.69
LINC00339-202ENST00000416769 TMEM155Q4W5P6 130 aa10.77□□□□□ -0.69
LINC00339-202ENST00000416769 RBM48Q5RL73 367 aaKnown RBP10.77□□□□□ -0.69
LINC00339-202ENST00000416769 LYPD4Q6UWN0 246 aa10.77□□□□□ -0.69
LINC00339-202ENST00000416769 RHOUQ7L0Q8 258 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms