RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 CRMP1Q14194 572 aa11.93□□□□□ -0.5
PAF1-202ENST00000416728 PCK2Q16822 640 aa11.93□□□□□ -0.5
PAF1-202ENST00000416728 TEX36Q5VZQ5 186 aa11.93□□□□□ -0.5
PAF1-202ENST00000416728 RASSF6Q6ZTQ3 369 aa11.93□□□□□ -0.5
PAF1-202ENST00000416728 ZNF511Q8NB15 262 aa11.93□□□□□ -0.5
PAF1-202ENST00000416728 SCCPDHQ8NBX0 429 aa11.93□□□□□ -0.5
PAF1-202ENST00000416728 OR6K6Q8NGW6 343 aa11.93□□□□□ -0.5
PAF1-202ENST00000416728 ST8SIA4Q92187 359 aa11.93□□□□□ -0.5
PAF1-202ENST00000416728 DYRK2Q92630 601 aa11.93□□□□□ -0.5
PAF1-202ENST00000416728 SPSB4Q96A44 273 aa11.93□□□□□ -0.5
PAF1-202ENST00000416728 TSSK6Q9BXA6 273 aa11.93□□□□□ -0.5
PAF1-202ENST00000416728 PDP1Q9P0J1 537 aaPredicted RBP11.93□□□□□ -0.5
PAF1-202ENST00000416728 KAAG1Q9UBP8 84 aa11.93□□□□□ -0.5
PAF1-202ENST00000416728 DOCK11Q5JSL3 2073 aa11.93□□□□□ -0.5
PAF1-202ENST00000416728 IGHV3OR15-7A0A075B7D8 119 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 CCNB2O95067 398 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 LHBP01229 141 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 GASTP01350 101 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 ANXA2P07355 339 aaKnown RBP11.92□□□□□ -0.5
PAF1-202ENST00000416728 SPI1P17947 270 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 BLVRAP53004 296 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 SLC25A1P53007 311 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 GRB2P62993 217 aaKnown RBP11.92□□□□□ -0.5
PAF1-202ENST00000416728 OCLNQ16625 522 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 TIGD6Q17RP2 521 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 MICBQ29980 383 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 SPATS1Q496A3 300 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 TEX30Q5JUR7 227 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 SLC16A9Q7RTY1 509 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 AQP11Q8NBQ7 271 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 LRRC29Q8WV35 223 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 CCT8L2Q96SF2 557 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 CITED1Q99966 193 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 NMNAT2Q9BZQ4 307 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 CNTD2Q9H8S5 307 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 RNPEPL1Q9HAU8 725 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 NDE1Q9NXR1 346 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 TAGLN3Q9UI15 199 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 RPUSD1Q9UJJ7 312 aaKnown RBP11.92□□□□□ -0.5
PAF1-202ENST00000416728 BAIAP2Q9UQB8 552 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 PKD1L1Q8TDX9 2849 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 A0A0U1RQK1 487 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 DHRS12A0PJE2 317 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 GPR137BO60478 399 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 FCN3O75636 299 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 SOX14O95416 240 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 IFNGP01579 166 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 IGHV4-59P01825 116 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 CLUP10909 449 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 MUC1P15941 1255 aaPredicted RBP11.92□□□□□ -0.5
PAF1-202ENST00000416728 HSD11B1P28845 292 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 CX3CR1P49238 355 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 FAM3AP98173 230 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 EIF2B1Q14232 305 aaKnown RBP11.92□□□□□ -0.5
PAF1-202ENST00000416728 CDONQ4KMG0 1287 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 ZNF770Q6IQ21 691 aaPredicted RBP11.92□□□□□ -0.5
PAF1-202ENST00000416728 C16orf89Q6UX73 402 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 CYP2R1Q6VVX0 501 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 SLC36A1Q7Z2H8 476 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 DPY19L4Q7Z388 723 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 CPLX4Q7Z7G2 160 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 WDR86Q86TI4 376 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 LDLRAD3Q86YD5 345 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 PDZD9Q8IXQ8 264 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 DEFB107AQ8IZN7 70 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 OR2T33Q8NG76 320 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 OR4Q3Q8NH05 313 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 REEP6Q96HR9 211 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 TOR3AQ9H497 397 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 SP140LQ9H930 580 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 KPTNQ9Y664 436 aa11.92□□□□□ -0.5
PAF1-202ENST00000416728 A0A1B0GVI7 797 aa11.91□□□□□ -0.5
PAF1-202ENST00000416728 RIIAD1A6NNX1 92 aa11.91□□□□□ -0.5
PAF1-202ENST00000416728 M0QZ24 198 aa11.91□□□□□ -0.5
PAF1-202ENST00000416728 TIMM23O14925 209 aa11.91□□□□□ -0.5
PAF1-202ENST00000416728 TIPRLO75663 272 aa11.91□□□□□ -0.5
PAF1-202ENST00000416728 APOC1P02654 83 aa11.91□□□□□ -0.5
PAF1-202ENST00000416728 CFL1P23528 166 aaKnown RBP11.91□□□□□ -0.5
PAF1-202ENST00000416728 GNALP38405 381 aa11.91□□□□□ -0.5
PAF1-202ENST00000416728 MAGEA2P43356 314 aa11.91□□□□□ -0.5
PAF1-202ENST00000416728 CSNK2BP67870 215 aa11.91□□□□□ -0.5
PAF1-202ENST00000416728 MXRA7P84157 204 aa11.91□□□□□ -0.5
PAF1-202ENST00000416728 WDR38Q5JTN6 314 aa11.91□□□□□ -0.5
PAF1-202ENST00000416728 VMO1Q7Z5L0 202 aa11.91□□□□□ -0.5
PAF1-202ENST00000416728 C11orf53Q8IXP5 236 aa11.91□□□□□ -0.5
PAF1-202ENST00000416728 OR1M1Q8NGA1 313 aa11.91□□□□□ -0.5
PAF1-202ENST00000416728 OR52H1Q8NGJ2 320 aa11.91□□□□□ -0.5
PAF1-202ENST00000416728 OR6N2Q8NGY6 317 aa11.91□□□□□ -0.5
PAF1-202ENST00000416728 SGK3Q96BR1 496 aa11.91□□□□□ -0.5
PAF1-202ENST00000416728 CCL13Q99616 98 aa11.91□□□□□ -0.5
PAF1-202ENST00000416728 DPAGT1Q9H3H5 408 aa11.91□□□□□ -0.5
PAF1-202ENST00000416728 ARL8BQ9NVJ2 186 aa11.91□□□□□ -0.5
PAF1-202ENST00000416728 ARMC1Q9NVT9 282 aa11.91□□□□□ -0.5
PAF1-202ENST00000416728 ACTR3BQ9P1U1 418 aa11.91□□□□□ -0.5
PAF1-202ENST00000416728 ONECUT1Q9UBC0 465 aa11.91□□□□□ -0.5
PAF1-202ENST00000416728 FAM96BQ9Y3D0 163 aa11.91□□□□□ -0.5
PAF1-202ENST00000416728 RNF114Q9Y508 228 aa11.91□□□□□ -0.5
PAF1-202ENST00000416728 hCG_38984A0A1B0GV85 526 aa11.9□□□□□ -0.5
PAF1-202ENST00000416728 A0A1B0GW55 424 aa11.9□□□□□ -0.5
PAF1-202ENST00000416728 DUX4L2P0CJ85 424 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms