RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 GMFBP60983 142 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 ZNF154Q13106 437 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 OR8B8Q15620 311 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 ZNF181Q2M3W8 571 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 ZNF404Q494X3 552 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 SLC35D3Q5M8T2 416 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 C1QL2Q7Z5L3 287 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 ZDHHC13Q8IUH4 622 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 CELF2-AS1Q8N7Q2 184 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 ZNF454Q8N9F8 522 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 Q8TCH9 128 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 ZNF418Q8TF45 676 aaPredicted RBP8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 PIGCQ92535 297 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 PPP1R14AQ96A00 147 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 SPSB4Q96A44 273 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 NEIL1Q96FI4 390 aaPredicted RBP8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 LYZL4Q96KX0 146 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 IL4I1Q96RQ9 567 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 SLC6A7Q99884 636 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 SSBP3Q9BWW4 388 aaPredicted RBP8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 SP140LQ9H930 580 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 H2AFY2Q9P0M6 372 aaPredicted RBP8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 MIOXQ9UGB7 285 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 OR5V1Q9UGF6 321 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 COPS3Q9UNS2 423 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 NOP16Q9Y3C1 178 aaKnown RBP8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 LRP12Q9Y561 859 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 INSIG2Q9Y5U4 225 aa8.51□□□□□ -1.05
NCKIPSD-202ENST00000413374 hCG_38984A0A1B0GV85 526 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 ZNF850A8MQ14 1090 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 PRR32B1ATL7 298 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 GYPAP02724 150 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 ZNF12P17014 697 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 GATA3P23771 443 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 GNALP38405 381 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 DDOSTP39656 456 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 PITPNBP48739 271 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 ESRRGP62508 458 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 CSNK2BP67870 215 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 ELF3P78545 371 aaPredicted RBP8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 DMRTC1Q5HYR2 192 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 SLX4IPQ5VYV7 408 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 KCTD8Q6ZWB6 473 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 MEPCEQ7L2J0 689 aaKnown RBP8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 WDR86Q86TI4 376 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 BCL6BQ8N143 479 aaPredicted RBP8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 BPIFB2Q8N4F0 458 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 SPERTQ8NA61 448 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 OR8B12Q8NGG6 310 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 OR8B3Q8NGG8 313 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 OR52H1Q8NGJ2 320 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 PYDC1Q8WXC3 89 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 DNAJC9Q8WXX5 260 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 ERGIC1Q969X5 290 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 SEH1LQ96EE3 360 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 TECTBQ96PL2 329 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 OR8B2Q96RD0 313 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 MRI1Q9BV20 369 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 PAPOLGQ9BWT3 736 aaKnown RBP8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 YIPF3Q9GZM5 350 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 RIBC2Q9H4K1 309 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 OPA3Q9H6K4 179 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 C14orf119Q9NWQ9 140 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 IKZF2Q9UKS7 526 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 GTF2A1LQ9UNN4 478 aa8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 SOX21Q9Y651 276 aaPredicted RBP8.5□□□□□ -1.05
NCKIPSD-202ENST00000413374 TMEM269A0A1B0GVZ9 245 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 ZAR1LA6NP61 321 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 LGALS8O00214 317 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 CDIPTO14735 213 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 ADAM20O43506 726 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 APOL3O95236 402 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 EGR1P18146 543 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 ACKR3P25106 362 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 MZT1Q08AG7 82 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 PRDX4Q13162 271 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 ARMCX4Q5H9R4 360 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 KLF17Q5JT82 389 aaPredicted RBP8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 LCN1P1Q5VSP4 162 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 WDR25Q64LD2 544 aaPredicted RBP8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 KDM4DQ6B0I6 523 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 BTNL3Q6UXE8 466 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 PLEKHG7Q6ZR37 379 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 CCDC121Q6ZUS5 278 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 NLRC3Q7RTR2 1065 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 COMMD2Q86X83 199 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 C11orf53Q8IXP5 236 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 PARP8Q8N3A8 854 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 GCSAMQ8N6F7 178 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 TEX29Q8N6K0 151 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 OR1M1Q8NGA1 313 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 LRRC29Q8WV35 223 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 RAB40AQ8WXH6 277 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 DUS3LQ96G46 650 aaKnown RBP8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 DUX5Q96PT3 197 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 TBX5Q99593 518 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 CIB1Q99828 191 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 PKP2Q99959 881 aa8.49□□□□□ -1.05
NCKIPSD-202ENST00000413374 APOL4Q9BPW4 351 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms