RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 SLX4IPQ5VYV7 408 aa15.92■□□□□ 0.14
SF3A1-202ENST00000411423 C11orf53Q8IXP5 236 aa15.92■□□□□ 0.14
SF3A1-202ENST00000411423 ZNF454Q8N9F8 522 aa15.92■□□□□ 0.14
SF3A1-202ENST00000411423 ERGIC1Q969X5 290 aa15.92■□□□□ 0.14
SF3A1-202ENST00000411423 DACT3Q96B18 629 aaPredicted RBP15.92■□□□□ 0.14
SF3A1-202ENST00000411423 PGAM5Q96HS1 289 aa15.92■□□□□ 0.14
SF3A1-202ENST00000411423 TTTY10Q9BZA0 68 aa15.92■□□□□ 0.14
SF3A1-202ENST00000411423 FGF23Q9GZV9 251 aaPredicted RBP15.92■□□□□ 0.14
SF3A1-202ENST00000411423 SLC22A4Q9H015 551 aa15.92■□□□□ 0.14
SF3A1-202ENST00000411423 OCEL1Q9H607 264 aa15.92■□□□□ 0.14
SF3A1-202ENST00000411423 OPA3Q9H6K4 179 aa15.92■□□□□ 0.14
SF3A1-202ENST00000411423 INSIG2Q9Y5U4 225 aa15.92■□□□□ 0.14
SF3A1-202ENST00000411423 FCN3O75636 299 aa15.91■□□□□ 0.14
SF3A1-202ENST00000411423 FSTL3O95633 263 aa15.91■□□□□ 0.14
SF3A1-202ENST00000411423 GRPP07492 148 aa15.91■□□□□ 0.14
SF3A1-202ENST00000411423 RPS2P15880 293 aaKnown RBP15.91■□□□□ 0.14
SF3A1-202ENST00000411423 EGR1P18146 543 aa15.91■□□□□ 0.14
SF3A1-202ENST00000411423 GATA3P23771 443 aa15.91■□□□□ 0.14
SF3A1-202ENST00000411423 ZNF154Q13106 437 aa15.91■□□□□ 0.14
SF3A1-202ENST00000411423 KLF17Q5JT82 389 aaPredicted RBP15.91■□□□□ 0.14
SF3A1-202ENST00000411423 AADACL4Q5VUY2 407 aa15.91■□□□□ 0.14
SF3A1-202ENST00000411423 SFRP4Q6FHJ7 346 aaPredicted RBP15.91■□□□□ 0.14
SF3A1-202ENST00000411423 ZNF841Q6ZN19 808 aa15.91■□□□□ 0.14
SF3A1-202ENST00000411423 OR8B12Q8NGG6 310 aa15.91■□□□□ 0.14
SF3A1-202ENST00000411423 CIB1Q99828 191 aa15.91■□□□□ 0.14
SF3A1-202ENST00000411423 C1orf123Q9NWV4 160 aa15.91■□□□□ 0.14
SF3A1-202ENST00000411423 CTSZQ9UBR2 303 aa15.91■□□□□ 0.14
SF3A1-202ENST00000411423 RHBDD3Q9Y3P4 386 aa15.91■□□□□ 0.14
SF3A1-202ENST00000411423 WNK2Q9Y3S1 2297 aa15.91■□□□□ 0.14
SF3A1-202ENST00000411423 LRRC30A6NM36 301 aa15.9■□□□□ 0.14
SF3A1-202ENST00000411423 TNFRSF13BO14836 293 aaPredicted RBP15.9■□□□□ 0.14
SF3A1-202ENST00000411423 PSMA6P60900 246 aaKnown RBP15.9■□□□□ 0.14
SF3A1-202ENST00000411423 ELF3P78545 371 aaPredicted RBP15.9■□□□□ 0.14
SF3A1-202ENST00000411423 OR8B8Q15620 311 aa15.9■□□□□ 0.14
SF3A1-202ENST00000411423 ESCO2Q56NI9 601 aa15.9■□□□□ 0.14
SF3A1-202ENST00000411423 C1orf87Q8N0U7 546 aa15.9■□□□□ 0.14
SF3A1-202ENST00000411423 GCSAMQ8N6F7 178 aa15.9■□□□□ 0.14
SF3A1-202ENST00000411423 TCEANCQ8N8B7 351 aa15.9■□□□□ 0.14
SF3A1-202ENST00000411423 BOLLQ8N9W6 283 aaKnown RBP15.9■□□□□ 0.14
SF3A1-202ENST00000411423 OR52H1Q8NGJ2 320 aa15.9■□□□□ 0.14
SF3A1-202ENST00000411423 OR11L1Q8NGX0 322 aa15.9■□□□□ 0.14
SF3A1-202ENST00000411423 PYDC1Q8WXC3 89 aa15.9■□□□□ 0.14
SF3A1-202ENST00000411423 PPP1R14AQ96A00 147 aa15.9■□□□□ 0.14
SF3A1-202ENST00000411423 SSBP3Q9BWW4 388 aaPredicted RBP15.9■□□□□ 0.14
SF3A1-202ENST00000411423 YIPF3Q9GZM5 350 aa15.9■□□□□ 0.14
SF3A1-202ENST00000411423 OR10A2Q9H208 303 aa15.9■□□□□ 0.14
SF3A1-202ENST00000411423 FN3KRPQ9HA64 309 aa15.9■□□□□ 0.14
SF3A1-202ENST00000411423 RNF7Q9UBF6 113 aa15.9■□□□□ 0.14
SF3A1-202ENST00000411423 LAMP5Q9UJQ1 280 aa15.9■□□□□ 0.14
SF3A1-202ENST00000411423 OAZ3Q9UMX2 235 aa15.9■□□□□ 0.14
SF3A1-202ENST00000411423 LRCH1Q9Y2L9 728 aa15.9■□□□□ 0.14
SF3A1-202ENST00000411423 ANKRD30BLA7E2S9 258 aa15.89■□□□□ 0.13
SF3A1-202ENST00000411423 MAGEB4O15481 346 aaPredicted RBP15.89■□□□□ 0.13
SF3A1-202ENST00000411423 APOC1P02654 83 aa15.89■□□□□ 0.13
SF3A1-202ENST00000411423 IRF2P14316 349 aa15.89■□□□□ 0.13
SF3A1-202ENST00000411423 DDOSTP39656 456 aa15.89■□□□□ 0.13
SF3A1-202ENST00000411423 CSNK2BP67870 215 aa15.89■□□□□ 0.13
SF3A1-202ENST00000411423 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.89■□□□□ 0.13
SF3A1-202ENST00000411423 ZDHHC13Q8IUH4 622 aa15.89■□□□□ 0.13
SF3A1-202ENST00000411423 C22orf15Q8WYQ4 148 aa15.89■□□□□ 0.13
SF3A1-202ENST00000411423 NEIL1Q96FI4 390 aaPredicted RBP15.89■□□□□ 0.13
SF3A1-202ENST00000411423 IL4I1Q96RQ9 567 aa15.89■□□□□ 0.13
SF3A1-202ENST00000411423 SLC6A7Q99884 636 aa15.89■□□□□ 0.13
SF3A1-202ENST00000411423 FAM206AQ9NX38 181 aa15.89■□□□□ 0.13
SF3A1-202ENST00000411423 MIOXQ9UGB7 285 aa15.89■□□□□ 0.13
SF3A1-202ENST00000411423 NOP16Q9Y3C1 178 aaKnown RBP15.89■□□□□ 0.13
SF3A1-202ENST00000411423 SAC3D1A6NKF1 404 aa15.88■□□□□ 0.13
SF3A1-202ENST00000411423 H3BNX3 289 aa15.88■□□□□ 0.13
SF3A1-202ENST00000411423 LHBP01229 141 aa15.88■□□□□ 0.13
SF3A1-202ENST00000411423 PSMB10P40306 273 aa15.88■□□□□ 0.13
SF3A1-202ENST00000411423 GNB2P62879 340 aa15.88■□□□□ 0.13
SF3A1-202ENST00000411423 PAX8Q06710 450 aa15.88■□□□□ 0.13
SF3A1-202ENST00000411423 POU4F2Q12837 409 aa15.88■□□□□ 0.13
SF3A1-202ENST00000411423 TUSC1Q2TAM9 212 aa15.88■□□□□ 0.13
SF3A1-202ENST00000411423 DCDC5Q6ZRR9 648 aa15.88■□□□□ 0.13
SF3A1-202ENST00000411423 MEPCEQ7L2J0 689 aaKnown RBP15.88■□□□□ 0.13
SF3A1-202ENST00000411423 KRT77Q7Z794 578 aa15.88■□□□□ 0.13
SF3A1-202ENST00000411423 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.88■□□□□ 0.13
SF3A1-202ENST00000411423 PLPP7Q8NBV4 271 aa15.88■□□□□ 0.13
SF3A1-202ENST00000411423 OR1M1Q8NGA1 313 aa15.88■□□□□ 0.13
SF3A1-202ENST00000411423 NANPQ8TBE9 248 aa15.88■□□□□ 0.13
SF3A1-202ENST00000411423 TMEM163Q8TC26 289 aa15.88■□□□□ 0.13
SF3A1-202ENST00000411423 OR8B4Q96RC9 309 aa15.88■□□□□ 0.13
SF3A1-202ENST00000411423 PKP2Q99959 881 aa15.88■□□□□ 0.13
SF3A1-202ENST00000411423 TEX12Q9BXU0 123 aa15.88■□□□□ 0.13
SF3A1-202ENST00000411423 SP140LQ9H930 580 aa15.88■□□□□ 0.13
SF3A1-202ENST00000411423 ADGRL4Q9HBW9 690 aa15.88■□□□□ 0.13
SF3A1-202ENST00000411423 SOX21Q9Y651 276 aaPredicted RBP15.88■□□□□ 0.13
SF3A1-202ENST00000411423 STAB1Q9NY15 2570 aa15.87■□□□□ 0.13
SF3A1-202ENST00000411423 IGHV3OR15-7A0A075B7D8 119 aa15.87■□□□□ 0.13
SF3A1-202ENST00000411423 IGHV2-70DA0A0C4DH43 119 aa15.87■□□□□ 0.13
SF3A1-202ENST00000411423 A6NLC8 198 aa15.87■□□□□ 0.13
SF3A1-202ENST00000411423 C22orf46C9J442 243 aa15.87■□□□□ 0.13
SF3A1-202ENST00000411423 LGALS8O00214 317 aa15.87■□□□□ 0.13
SF3A1-202ENST00000411423 SRSF10O75494 262 aaKnown RBP15.87■□□□□ 0.13
SF3A1-202ENST00000411423 CIB2O75838 187 aa15.87■□□□□ 0.13
SF3A1-202ENST00000411423 FCGR1AP12314 374 aa15.87■□□□□ 0.13
SF3A1-202ENST00000411423 PITPNBP48739 271 aa15.87■□□□□ 0.13
SF3A1-202ENST00000411423 MFGE8Q08431 387 aaPredicted RBP15.87■□□□□ 0.13
SF3A1-202ENST00000411423 KPNB1Q14974 876 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms