RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 CPEB3Q8NE35 698 aaKnown RBP4.81□□□□□ -1.64
EPHA4-202ENST00000409854 AKR7LQ8NHP1 331 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 FAM57AQ8TBR7 257 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 LGALS14Q8TCE9 139 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 SLC7A6Q92536 515 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 C10orf35Q96D05 121 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 PGAM5Q96HS1 289 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 C1QTNF5Q9BXJ0 243 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 NOX3Q9HBY0 568 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 PLSCR4Q9NRQ2 329 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 CKLFQ9UBR5 152 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 STEAP1Q9UHE8 339 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 ZNF391Q9UJN7 358 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 ETV7Q9Y603 341 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 BSNQ9UPA5 3926 aa4.81□□□□□ -1.64
EPHA4-202ENST00000409854 MEGF11A6BM72 1044 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 FABP12A6NFH5 140 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 ANXA2P2A6NMY6 339 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 F5H5K5 113 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 H3BSH0 61 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 SLC17A2O00624 439 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 DHRS3O75911 302 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 HLA-DQB1P01920 261 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 MAS1P04201 325 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 HOXD4P09016 255 aaPredicted RBP4.8□□□□□ -1.64
EPHA4-202ENST00000409854 SNRPBP14678 240 aaKnown RBP4.8□□□□□ -1.64
EPHA4-202ENST00000409854 IGHV1-2P23083 117 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 ARR3P36575 388 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 TALDO1P37837 337 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 TSPAN5P62079 268 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 CXADRP78310 365 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 SNAI3Q3KNW1 292 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 UBE2NLQ5JXB2 153 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 C1orf100Q5SVJ3 147 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 C1orf185Q5T7R7 199 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 HES5Q5TA89 166 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 UBE2J2Q8N2K1 259 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 SAMD12Q8N8I0 201 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 GDPD1Q8N9F7 314 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 DNAAF1Q8NEP3 725 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 C1orf162Q8NEQ5 155 aaPredicted RBP4.8□□□□□ -1.64
EPHA4-202ENST00000409854 SSC4DQ8WTU2 575 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 HPS1Q92902 700 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 SPSB4Q96A44 273 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 SLC25A28Q96A46 364 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 FGGYQ96C11 551 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 SLC25A38Q96DW6 304 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 ZFP3Q96NJ6 502 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 USB1Q9BQ65 265 aaKnown RBP4.8□□□□□ -1.64
EPHA4-202ENST00000409854 SOX7Q9BT81 388 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 SLA2Q9H6Q3 261 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 OR5V1Q9UGF6 321 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 CHTOPQ9Y3Y2 248 aaKnown RBP4.8□□□□□ -1.64
EPHA4-202ENST00000409854 SSX5O60225 188 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 TOXO94900 526 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 TIMP3P35625 211 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 STEAP3Q658P3 488 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 ZNF585AQ6P3V2 769 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 VWA1Q6PCB0 445 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 FAM131AQ6UXB0 335 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 PGAP1Q75T13 922 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 SNX29P2Q8IUI4 249 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 ZNF584Q8IVC4 421 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 GCNT2Q8N0V5 402 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 CENPSQ8N2Z9 138 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 ZNF433Q8N7K0 673 aaPredicted RBP4.8□□□□□ -1.64
EPHA4-202ENST00000409854 OR1M1Q8NGA1 313 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 OR4M1Q8NGD0 313 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 OR51A2Q8NGJ7 313 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 OR10A2Q9H208 303 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 ABCG5Q9H222 651 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 RGCCQ9H4X1 137 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 LUZP4Q9P127 313 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 ZNF835Q9Y2P0 537 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 LOC100509620A0A075B734 347 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 A0A096LPE4 126 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 A0A1W2PPZ6 126 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 FIGNL2A6NMB9 653 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 C1QTNF9BB2RNN3 333 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 L7N2F9 121 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 TBX1O43435 398 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 HLA-HP01893 362 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 ALDOBP05062 364 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 C1QTNF9P0C862 333 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 CEACAM8P31997 349 aaPredicted RBP4.8□□□□□ -1.64
EPHA4-202ENST00000409854 THBS4P35443 961 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 MNDAP41218 407 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 NR4A2P43354 598 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 SLC6A9P48067 706 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 FOXF2Q12947 444 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 C9orf135Q5VTT2 229 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 GLT8D1Q68CQ7 371 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 BAIAP2L2Q6UXY1 529 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 KRT74Q7RTS7 529 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 LUZP2Q86TE4 346 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 CCDC36Q8IYA8 594 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 OR5AS1Q8N127 324 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 GABRG1Q8N1C3 465 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 OR6M1Q8NGM8 313 aa4.8□□□□□ -1.64
EPHA4-202ENST00000409854 NANOS1Q8WY41 292 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms