RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 ASB9Q96DX5 294 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 PCGF1Q9BSM1 259 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 VNN3Q9NY84 501 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 CTSZQ9UBR2 303 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 C5orf63A6NC05 138 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 ZNF879B4DU55 563 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 H3BN98 237 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 TMPRSS2O15393 492 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 HOXB6P17509 224 aaKnown RBP12.25□□□□□ -0.45
CBX3-203ENST00000409747 GSTT1P30711 240 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 CFHR2P36980 270 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 LINC01590Q5TEZ4 76 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 METTL11BQ5VVY1 283 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 C16orf87Q6PH81 154 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 BRD3OSQ6XYD6 125 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 SPATC1Q76KD6 591 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 SLC16A9Q7RTY1 509 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 ERI1Q8IV48 349 aaKnown RBP12.25□□□□□ -0.45
CBX3-203ENST00000409747 RNF133Q8WVZ7 376 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 REEP6Q96HR9 211 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 PRDM13Q9H4Q3 707 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 RGCCQ9H4X1 137 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 ZNF696Q9H7X3 374 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 UNKLQ9H9P5 680 aaKnown RBP12.25□□□□□ -0.45
CBX3-203ENST00000409747 RNPEPL1Q9HAU8 725 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 NOX4Q9NPH5 578 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 SRRM5B3KS81 715 aa12.24□□□□□ -0.45
CBX3-203ENST00000409747 HOXA3O43365 443 aaPredicted RBP12.24□□□□□ -0.45
CBX3-203ENST00000409747 TOX4O94842 621 aa12.24□□□□□ -0.45
CBX3-203ENST00000409747 ECDO95905 644 aaPredicted RBP12.24□□□□□ -0.45
CBX3-203ENST00000409747 ANOS1P23352 680 aa12.24□□□□□ -0.45
CBX3-203ENST00000409747 GNALP38405 381 aa12.24□□□□□ -0.45
CBX3-203ENST00000409747 FAM3AP98173 230 aa12.24□□□□□ -0.45
CBX3-203ENST00000409747 DEFB112Q30KQ8 113 aa12.24□□□□□ -0.45
CBX3-203ENST00000409747 TEX36Q5VZQ5 186 aa12.24□□□□□ -0.45
CBX3-203ENST00000409747 DPY19L4Q7Z388 723 aa12.24□□□□□ -0.45
CBX3-203ENST00000409747 GCSAMQ8N6F7 178 aa12.24□□□□□ -0.45
CBX3-203ENST00000409747 CSNK2A3Q8NEV1 391 aa12.24□□□□□ -0.45
CBX3-203ENST00000409747 GIPC3Q8TF64 312 aa12.24□□□□□ -0.45
CBX3-203ENST00000409747 OTULINQ96BN8 352 aa12.24□□□□□ -0.45
CBX3-203ENST00000409747 CCT8L2Q96SF2 557 aa12.24□□□□□ -0.45
CBX3-203ENST00000409747 ABHD6Q9BV23 337 aa12.24□□□□□ -0.45
CBX3-203ENST00000409747 OR10A2Q9H208 303 aa12.24□□□□□ -0.45
CBX3-203ENST00000409747 MARCH7Q9H992 704 aa12.24□□□□□ -0.45
CBX3-203ENST00000409747 KAAG1Q9UBP8 84 aa12.24□□□□□ -0.45
CBX3-203ENST00000409747 GLCEO94923 617 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 CST1P01037 141 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 LHBP01229 141 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 GYPAP02724 150 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 MUC1P15941 1255 aaPredicted RBP12.23□□□□□ -0.45
CBX3-203ENST00000409747 MS4A2Q01362 244 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 PDCD1Q15116 288 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 MICBQ29980 383 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 ZNF826PQ6ZT77 177 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 FAM57BQ71RH2 274 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 FAM90A1Q86YD7 464 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 TMEM86BQ8N661 226 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 GATAD2BQ8WXI9 593 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 CCDC124Q96CT7 223 aaKnown RBP12.23□□□□□ -0.45
CBX3-203ENST00000409747 WDFY2Q96P53 400 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 NIPSNAP1Q9BPW8 284 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 A0A1B0GUS0 222 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 hCG_38984A0A1B0GV85 526 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 MDFIC2A0A1B0GVS7 189 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 FAM183AA6NL82 134 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 TNFRSF13BO14836 293 aaPredicted RBP12.23□□□□□ -0.45
CBX3-203ENST00000409747 H2BFMP0C1H6 154 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 OPRL1P41146 370 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 NAA10P41227 235 aaPredicted RBP12.23□□□□□ -0.45
CBX3-203ENST00000409747 ZNF121P58317 390 aaPredicted RBP12.23□□□□□ -0.45
CBX3-203ENST00000409747 HOXA4Q00056 320 aaPredicted RBP12.23□□□□□ -0.45
CBX3-203ENST00000409747 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.23□□□□□ -0.45
CBX3-203ENST00000409747 CCDC197Q8NCU1 140 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 TMIGD2Q96BF3 282 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 SGK3Q96BR1 496 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 FAM71F1Q96KD3 344 aaPredicted RBP12.23□□□□□ -0.45
CBX3-203ENST00000409747 FEVQ99581 238 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 CHID1Q9BWS9 393 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 PAPOLGQ9BWT3 736 aaKnown RBP12.23□□□□□ -0.45
CBX3-203ENST00000409747 SLITRK2Q9H156 845 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 MED20Q9H944 212 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 SMURF1Q9HCE7 757 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 ABCB9Q9NP78 766 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 DNAJC27Q9NZQ0 273 aa12.23□□□□□ -0.45
CBX3-203ENST00000409747 SOX21Q9Y651 276 aaPredicted RBP12.23□□□□□ -0.45
CBX3-203ENST00000409747 ANXA2P2A6NMY6 339 aa12.22□□□□□ -0.45
CBX3-203ENST00000409747 GNGT2O14610 69 aa12.22□□□□□ -0.45
CBX3-203ENST00000409747 DVL1O14640 695 aa12.22□□□□□ -0.45
CBX3-203ENST00000409747 FAM107AO95990 144 aa12.22□□□□□ -0.45
CBX3-203ENST00000409747 CRYBA1P05813 215 aa12.22□□□□□ -0.45
CBX3-203ENST00000409747 SFTPBP07988 381 aa12.22□□□□□ -0.45
CBX3-203ENST00000409747 MMP9P14780 707 aa12.22□□□□□ -0.45
CBX3-203ENST00000409747 IL5RAQ01344 420 aa12.22□□□□□ -0.45
CBX3-203ENST00000409747 GFOD2Q3B7J2 385 aa12.22□□□□□ -0.45
CBX3-203ENST00000409747 Q6YL49 198 aa12.22□□□□□ -0.45
CBX3-203ENST00000409747 PRSS45Q7RTY3 260 aa12.22□□□□□ -0.45
CBX3-203ENST00000409747 SLC36A1Q7Z2H8 476 aa12.22□□□□□ -0.45
CBX3-203ENST00000409747 TIGD4Q8IY51 512 aa12.22□□□□□ -0.45
CBX3-203ENST00000409747 IQCF1Q8N6M8 205 aa12.22□□□□□ -0.45
CBX3-203ENST00000409747 ZNF454Q8N9F8 522 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms