RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 ST3GAL2Q16842 350 aa18.1■□□□□ 0.49
USP39-203ENST00000409470 DMRTC1Q5HYR2 192 aa18.1■□□□□ 0.49
USP39-203ENST00000409470 CDH24Q86UP0 819 aa18.1■□□□□ 0.49
USP39-203ENST00000409470 MCEMP1Q8IX19 187 aa18.1■□□□□ 0.49
USP39-203ENST00000409470 FGFBP3Q8TAT2 258 aa18.1■□□□□ 0.49
USP39-203ENST00000409470 NPRL2Q8WTW4 380 aa18.1■□□□□ 0.49
USP39-203ENST00000409470 PP6455Q8WZ26 134 aa18.1■□□□□ 0.49
USP39-203ENST00000409470 WNT5BQ9H1J7 359 aa18.1■□□□□ 0.49
USP39-203ENST00000409470 FBLN5Q9UBX5 448 aa18.1■□□□□ 0.49
USP39-203ENST00000409470 TMEM235A6NFC5 223 aa18.1■□□□□ 0.49
USP39-203ENST00000409470 TMEM14DPA8MWL7 114 aa18.1■□□□□ 0.49
USP39-203ENST00000409470 RAB27BO00194 218 aa18.1■□□□□ 0.49
USP39-203ENST00000409470 TNFRSF10AO00220 468 aa18.1■□□□□ 0.49
USP39-203ENST00000409470 SCGNO76038 276 aa18.1■□□□□ 0.49
USP39-203ENST00000409470 NDUFB6O95139 128 aa18.1■□□□□ 0.49
USP39-203ENST00000409470 RCVRNP35243 200 aa18.1■□□□□ 0.49
USP39-203ENST00000409470 CD276Q5ZPR3 534 aa18.1■□□□□ 0.49
USP39-203ENST00000409470 Q6ZTK2 550 aa18.1■□□□□ 0.49
USP39-203ENST00000409470 PNLDC1Q8NA58 520 aaKnown RBP18.1■□□□□ 0.49
USP39-203ENST00000409470 OR4D10Q8NGI6 311 aa18.1■□□□□ 0.49
USP39-203ENST00000409470 DVL3Q92997 716 aaPredicted RBP18.1■□□□□ 0.49
USP39-203ENST00000409470 ELF5Q9UKW6 265 aaPredicted RBP18.1■□□□□ 0.49
USP39-203ENST00000409470 DNAJC13O75165 2243 aa18.09■□□□□ 0.49
USP39-203ENST00000409470 TRGV5A0A0B4J1U4 118 aa18.09■□□□□ 0.49
USP39-203ENST00000409470 ZNF587BE7ETH6 402 aa18.09■□□□□ 0.49
USP39-203ENST00000409470 SSNA1O43805 119 aa18.09■□□□□ 0.49
USP39-203ENST00000409470 PRAF2O60831 178 aa18.09■□□□□ 0.49
USP39-203ENST00000409470 CD3DP04234 171 aa18.09■□□□□ 0.49
USP39-203ENST00000409470 TNFSF10P50591 281 aa18.09■□□□□ 0.49
USP39-203ENST00000409470 HGFACQ04756 655 aa18.09■□□□□ 0.49
USP39-203ENST00000409470 C9orf135Q5VTT2 229 aa18.09■□□□□ 0.49
USP39-203ENST00000409470 STEAP1BQ6NZ63 245 aa18.09■□□□□ 0.49
USP39-203ENST00000409470 OR2W3Q7Z3T1 314 aa18.09■□□□□ 0.49
USP39-203ENST00000409470 OR2AE1Q8NHA4 323 aa18.09■□□□□ 0.49
USP39-203ENST00000409470 CMBLQ96DG6 245 aa18.09■□□□□ 0.49
USP39-203ENST00000409470 REEP6Q96HR9 211 aa18.09■□□□□ 0.49
USP39-203ENST00000409470 BCO1Q9HAY6 547 aa18.09■□□□□ 0.49
USP39-203ENST00000409470 ZNF222Q9UK12 451 aa18.09■□□□□ 0.49
USP39-203ENST00000409470 OR6C65A6NJZ3 312 aa18.08■□□□□ 0.49
USP39-203ENST00000409470 ZNF724A8MTY0 619 aa18.08■□□□□ 0.49
USP39-203ENST00000409470 TAS2R19P59542 299 aa18.08■□□□□ 0.49
USP39-203ENST00000409470 ARF1P84077 181 aaKnown RBP18.08■□□□□ 0.49
USP39-203ENST00000409470 RNPS1Q15287 305 aaKnown RBP18.08■□□□□ 0.49
USP39-203ENST00000409470 NRN1LQ496H8 165 aa18.08■□□□□ 0.49
USP39-203ENST00000409470 Q6ZSR3 168 aa18.08■□□□□ 0.49
USP39-203ENST00000409470 GABRG1Q8N1C3 465 aa18.08■□□□□ 0.49
USP39-203ENST00000409470 FDCSPQ8NFU4 85 aa18.08■□□□□ 0.49
USP39-203ENST00000409470 SEMA6DQ8NFY4 1073 aa18.08■□□□□ 0.49
USP39-203ENST00000409470 AQP3Q92482 292 aa18.08■□□□□ 0.49
USP39-203ENST00000409470 C10orf35Q96D05 121 aa18.08■□□□□ 0.49
USP39-203ENST00000409470 CHST5Q9GZS9 411 aa18.08■□□□□ 0.49
USP39-203ENST00000409470 UPB1Q9UBR1 384 aa18.08■□□□□ 0.49
USP39-203ENST00000409470 CSAG2Q9Y5P2 127 aa18.08■□□□□ 0.49
USP39-203ENST00000409470 ICMTO60725 284 aa18.08■□□□□ 0.48
USP39-203ENST00000409470 MPIG6BO95866 241 aa18.08■□□□□ 0.48
USP39-203ENST00000409470 PRF1P14222 555 aa18.08■□□□□ 0.48
USP39-203ENST00000409470 WT1P19544 449 aaPredicted RBP18.08■□□□□ 0.48
USP39-203ENST00000409470 RBMS2Q15434 407 aaKnown RBP18.08■□□□□ 0.48
USP39-203ENST00000409470 KISS1Q15726 138 aa18.08■□□□□ 0.48
USP39-203ENST00000409470 UBE2V2Q15819 145 aa18.08■□□□□ 0.48
USP39-203ENST00000409470 ZNF260Q3ZCT1 412 aa18.08■□□□□ 0.48
USP39-203ENST00000409470 CDNFQ49AH0 187 aa18.08■□□□□ 0.48
USP39-203ENST00000409470 RNFT1Q5M7Z0 435 aa18.08■□□□□ 0.48
USP39-203ENST00000409470 IGF2-ASQ6U949 168 aa18.08■□□□□ 0.48
USP39-203ENST00000409470 FGD2Q7Z6J4 655 aa18.08■□□□□ 0.48
USP39-203ENST00000409470 TMEM229BQ8NBD8 167 aa18.08■□□□□ 0.48
USP39-203ENST00000409470 OR11H7Q8NGC8 314 aa18.08■□□□□ 0.48
USP39-203ENST00000409470 KCNG3Q8TAE7 436 aa18.08■□□□□ 0.48
USP39-203ENST00000409470 APH1AQ96BI3 265 aa18.08■□□□□ 0.48
USP39-203ENST00000409470 RNF122Q9H9V4 155 aa18.08■□□□□ 0.48
USP39-203ENST00000409470 CYB5AP00167 134 aa18.07■□□□□ 0.48
USP39-203ENST00000409470 KRTAP27-1Q3LI81 207 aa18.07■□□□□ 0.48
USP39-203ENST00000409470 METTL11BQ5VVY1 283 aa18.07■□□□□ 0.48
USP39-203ENST00000409470 SSC4DQ8WTU2 575 aa18.07■□□□□ 0.48
USP39-203ENST00000409470 GINS4Q9BRT9 223 aa18.07■□□□□ 0.48
USP39-203ENST00000409470 A0A1B0GUH1 482 aa18.06■□□□□ 0.48
USP39-203ENST00000409470 WIPF3A6NGB9 483 aa18.06■□□□□ 0.48
USP39-203ENST00000409470 CDC14BO60729 498 aa18.06■□□□□ 0.48
USP39-203ENST00000409470 C1QBP02746 253 aa18.06■□□□□ 0.48
USP39-203ENST00000409470 HPXP02790 462 aa18.06■□□□□ 0.48
USP39-203ENST00000409470 MMP7P09237 267 aaPredicted RBP18.06■□□□□ 0.48
USP39-203ENST00000409470 UBBP0CG47 229 aa18.06■□□□□ 0.48
USP39-203ENST00000409470 RAD52P43351 418 aa18.06■□□□□ 0.48
USP39-203ENST00000409470 NOVA1P51513 510 aaKnown RBP18.06■□□□□ 0.48
USP39-203ENST00000409470 PABPC1L2AQ5JQF8 200 aa18.06■□□□□ 0.48
USP39-203ENST00000409470 TMEM104Q8NE00 496 aa18.06■□□□□ 0.48
USP39-203ENST00000409470 OR51S1Q8NGJ8 323 aa18.06■□□□□ 0.48
USP39-203ENST00000409470 OR5D18Q8NGL1 313 aa18.06■□□□□ 0.48
USP39-203ENST00000409470 OR10R2Q8NGX6 335 aa18.06■□□□□ 0.48
USP39-203ENST00000409470 C1orf147Q96MC9 270 aaPredicted RBP18.06■□□□□ 0.48
USP39-203ENST00000409470 BANF2Q9H503 90 aa18.06■□□□□ 0.48
USP39-203ENST00000409470 ZNF224Q9NZL3 707 aa18.06■□□□□ 0.48
USP39-203ENST00000409470 CNOT1A5YKK6 2376 aaKnown RBP18.06■□□□□ 0.48
USP39-203ENST00000409470 A0A096LPE4 126 aa18.06■□□□□ 0.48
USP39-203ENST00000409470 A0A1W2PPZ6 126 aa18.06■□□□□ 0.48
USP39-203ENST00000409470 SMLR1H3BR10 107 aa18.06■□□□□ 0.48
USP39-203ENST00000409470 CRTAPO75718 401 aaPredicted RBP18.06■□□□□ 0.48
USP39-203ENST00000409470 ALX3O95076 343 aa18.06■□□□□ 0.48
USP39-203ENST00000409470 RAB3DO95716 219 aa18.06■□□□□ 0.48
USP39-203ENST00000409470 TGM6O95932 706 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms