RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 PNRC2Q9NPJ4 139 aaKnown RBP13.56□□□□□ -0.24
CHMP3-203ENST00000409225 SERTAD4Q9NUC0 356 aa13.56□□□□□ -0.24
CHMP3-203ENST00000409225 CAPN7Q9Y6W3 813 aa13.56□□□□□ -0.24
CHMP3-203ENST00000409225 A0A1W2PQ09 198 aa13.55□□□□□ -0.24
CHMP3-203ENST00000409225 MEGF11A6BM72 1044 aa13.55□□□□□ -0.24
CHMP3-203ENST00000409225 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.55□□□□□ -0.24
CHMP3-203ENST00000409225 M0R1W7 72 aa13.55□□□□□ -0.24
CHMP3-203ENST00000409225 PTP4A3O75365 173 aa13.55□□□□□ -0.24
CHMP3-203ENST00000409225 KDELR2P33947 212 aa13.55□□□□□ -0.24
CHMP3-203ENST00000409225 GRK5P34947 590 aa13.55□□□□□ -0.24
CHMP3-203ENST00000409225 MSX2P35548 267 aaPredicted RBP13.55□□□□□ -0.24
CHMP3-203ENST00000409225 GMFBP60983 142 aa13.55□□□□□ -0.24
CHMP3-203ENST00000409225 SELENOWP63302 87 aa13.55□□□□□ -0.24
CHMP3-203ENST00000409225 RFX4Q33E94 735 aa13.55□□□□□ -0.24
CHMP3-203ENST00000409225 RRM2BQ7LG56 351 aa13.55□□□□□ -0.24
CHMP3-203ENST00000409225 VTCN1Q7Z7D3 282 aa13.55□□□□□ -0.24
CHMP3-203ENST00000409225 WDR86Q86TI4 376 aa13.55□□□□□ -0.24
CHMP3-203ENST00000409225 SLC26A10Q8NG04 563 aa13.55□□□□□ -0.24
CHMP3-203ENST00000409225 OR5T2Q8NGG2 359 aa13.55□□□□□ -0.24
CHMP3-203ENST00000409225 OR56B2PQ8NGI1 322 aa13.55□□□□□ -0.24
CHMP3-203ENST00000409225 OR9Q1Q8NGQ5 310 aa13.55□□□□□ -0.24
CHMP3-203ENST00000409225 OR8S1Q8NH09 359 aa13.55□□□□□ -0.24
CHMP3-203ENST00000409225 AJUBAQ96IF1 538 aa13.55□□□□□ -0.24
CHMP3-203ENST00000409225 SH3GL1Q99961 368 aa13.55□□□□□ -0.24
CHMP3-203ENST00000409225 RNPEPL1Q9HAU8 725 aa13.55□□□□□ -0.24
CHMP3-203ENST00000409225 B9D1Q9UPM9 204 aa13.55□□□□□ -0.24
CHMP3-203ENST00000409225 SIGLEC7Q9Y286 467 aa13.55□□□□□ -0.24
CHMP3-203ENST00000409225 SF3B6Q9Y3B4 125 aaKnown RBP13.55□□□□□ -0.24
CHMP3-203ENST00000409225 RYR2Q92736 4967 aa13.54□□□□□ -0.24
CHMP3-203ENST00000409225 A0A1W2PRX2 142 aa13.54□□□□□ -0.24
CHMP3-203ENST00000409225 ANGPTL7O43827 346 aa13.54□□□□□ -0.24
CHMP3-203ENST00000409225 TFF1P04155 84 aa13.54□□□□□ -0.24
CHMP3-203ENST00000409225 IFNW1P05000 195 aa13.54□□□□□ -0.24
CHMP3-203ENST00000409225 AMY2BP19961 511 aa13.54□□□□□ -0.24
CHMP3-203ENST00000409225 POU1F1P28069 291 aa13.54□□□□□ -0.24
CHMP3-203ENST00000409225 TGM4P49221 684 aa13.54□□□□□ -0.24
CHMP3-203ENST00000409225 CSNK2BP67870 215 aa13.54□□□□□ -0.24
CHMP3-203ENST00000409225 SLC36A3Q495N2 470 aa13.54□□□□□ -0.24
CHMP3-203ENST00000409225 HCP5Q6MZN7 132 aa13.54□□□□□ -0.24
CHMP3-203ENST00000409225 DPY19L4Q7Z388 723 aa13.54□□□□□ -0.24
CHMP3-203ENST00000409225 OR6V1Q8N148 313 aa13.54□□□□□ -0.24
CHMP3-203ENST00000409225 DTX3Q8N9I9 347 aa13.54□□□□□ -0.24
CHMP3-203ENST00000409225 WFDC9Q8NEX5 89 aa13.54□□□□□ -0.24
CHMP3-203ENST00000409225 TSPEARQ8WU66 669 aa13.54□□□□□ -0.24
CHMP3-203ENST00000409225 SPTSSAQ969W0 71 aa13.54□□□□□ -0.24
CHMP3-203ENST00000409225 GPX7Q96SL4 187 aaPredicted RBP13.54□□□□□ -0.24
CHMP3-203ENST00000409225 MEGF9Q9H1U4 602 aa13.54□□□□□ -0.24
CHMP3-203ENST00000409225 TMEM5Q9Y2B1 443 aa13.54□□□□□ -0.24
CHMP3-203ENST00000409225 BIRC6Q9NR09 4857 aa13.54□□□□□ -0.24
CHMP3-203ENST00000409225 HLA-DQA2P01906 255 aa13.53□□□□□ -0.24
CHMP3-203ENST00000409225 RPS6KA3P51812 740 aa13.53□□□□□ -0.24
CHMP3-203ENST00000409225 KRTAP10-11P60412 298 aa13.53□□□□□ -0.24
CHMP3-203ENST00000409225 BLMHQ13867 455 aa13.53□□□□□ -0.24
CHMP3-203ENST00000409225 STUMQ69YW2 141 aa13.53□□□□□ -0.24
CHMP3-203ENST00000409225 WDR82Q6UXN9 313 aa13.53□□□□□ -0.24
CHMP3-203ENST00000409225 LIAT1Q6ZQX7 453 aa13.53□□□□□ -0.24
CHMP3-203ENST00000409225 OR8J3Q8NGG0 315 aa13.53□□□□□ -0.24
CHMP3-203ENST00000409225 C12orf43Q96C57 262 aaKnown RBP13.53□□□□□ -0.24
CHMP3-203ENST00000409225 TLCD1Q96CP7 247 aa13.53□□□□□ -0.24
CHMP3-203ENST00000409225 DUS3LQ96G46 650 aaKnown RBP13.53□□□□□ -0.24
CHMP3-203ENST00000409225 RSRC1Q96IZ7 334 aaKnown RBP13.53□□□□□ -0.24
CHMP3-203ENST00000409225 OR5M11Q96RB7 305 aa13.53□□□□□ -0.24
CHMP3-203ENST00000409225 OCSTAMPQ9BR26 566 aa13.53□□□□□ -0.24
CHMP3-203ENST00000409225 SNTG1Q9NSN8 517 aa13.53□□□□□ -0.24
CHMP3-203ENST00000409225 CYB5R1Q9UHQ9 305 aa13.53□□□□□ -0.24
CHMP3-203ENST00000409225 ZNF391Q9UJN7 358 aa13.53□□□□□ -0.24
CHMP3-203ENST00000409225 N6AMT1Q9Y5N5 214 aa13.53□□□□□ -0.24
CHMP3-203ENST00000409225 NKX6-3A6NJ46 265 aa13.52□□□□□ -0.25
CHMP3-203ENST00000409225 H0YAE9 185 aa13.52□□□□□ -0.25
CHMP3-203ENST00000409225 FXYD1O00168 92 aa13.52□□□□□ -0.25
CHMP3-203ENST00000409225 PEX14O75381 377 aa13.52□□□□□ -0.25
CHMP3-203ENST00000409225 TXNDC12O95881 172 aa13.52□□□□□ -0.25
CHMP3-203ENST00000409225 TROVE2P10155 538 aaKnown RBP eCLIP13.52□□□□□ -0.25
CHMP3-203ENST00000409225 NDUFB7P17568 137 aa13.52□□□□□ -0.25
CHMP3-203ENST00000409225 NAA10P41227 235 aaPredicted RBP13.52□□□□□ -0.25
CHMP3-203ENST00000409225 GSK3BP49841 420 aa13.52□□□□□ -0.25
CHMP3-203ENST00000409225 FXYD6P3P58550 94 aa13.52□□□□□ -0.25
CHMP3-203ENST00000409225 AANATQ16613 207 aa13.52□□□□□ -0.25
CHMP3-203ENST00000409225 DPY19L2P2Q6ZN68 376 aa13.52□□□□□ -0.25
CHMP3-203ENST00000409225 PAPD5Q8NDF8 572 aaKnown RBP13.52□□□□□ -0.25
CHMP3-203ENST00000409225 OR1M1Q8NGA1 313 aa13.52□□□□□ -0.25
CHMP3-203ENST00000409225 MAP6Q96JE9 813 aa13.52□□□□□ -0.25
CHMP3-203ENST00000409225 NMNAT3Q96T66 252 aa13.52□□□□□ -0.25
CHMP3-203ENST00000409225 TMEM120AQ9BXJ8 343 aa13.52□□□□□ -0.25
CHMP3-203ENST00000409225 NSRP1Q9H0G5 558 aaKnown RBP13.52□□□□□ -0.25
CHMP3-203ENST00000409225 RPRD1BQ9NQG5 326 aaKnown RBP13.52□□□□□ -0.25
CHMP3-203ENST00000409225 SLC25A10Q9UBX3 287 aaPredicted RBP13.52□□□□□ -0.25
CHMP3-203ENST00000409225 EPPK1P58107 5090 aaKnown RBP13.51□□□□□ -0.25
CHMP3-203ENST00000409225 DYNC2H1Q8NCM8 4307 aaKnown RBP13.51□□□□□ -0.25
CHMP3-203ENST00000409225 ANKRD30BLA7E2S9 258 aa13.51□□□□□ -0.25
CHMP3-203ENST00000409225 FAM220BPB1ANY3 271 aa13.51□□□□□ -0.25
CHMP3-203ENST00000409225 RENP00797 406 aa13.51□□□□□ -0.25
CHMP3-203ENST00000409225 DGUOKQ16854 277 aa13.51□□□□□ -0.25
CHMP3-203ENST00000409225 ATPAF1Q5TC12 328 aaPredicted RBP13.51□□□□□ -0.25
CHMP3-203ENST00000409225 PIFOQ8TCI5 191 aa13.51□□□□□ -0.25
CHMP3-203ENST00000409225 WIPF2Q8TF74 440 aaPredicted RBP13.51□□□□□ -0.25
CHMP3-203ENST00000409225 ERMAPQ96PL5 475 aaPredicted RBP13.51□□□□□ -0.25
CHMP3-203ENST00000409225 GAFA1Q96PS6 74 aa13.51□□□□□ -0.25
CHMP3-203ENST00000409225 DDOQ99489 341 aa13.51□□□□□ -0.25
CHMP3-203ENST00000409225 B9D2Q9BPU9 175 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms