RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 PSMA6P60900 246 aaKnown RBP7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 SEC61A1P61619 476 aaKnown RBP7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 SRSF2Q01130 221 aaKnown RBP7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 PAX8Q06710 450 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 OR8B8Q15620 311 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 PRAMEF6Q5VXH4 476 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 PLBD1Q6P4A8 553 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 DEGS2Q6QHC5 323 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 LYPD4Q6UWN0 246 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 FAM57BQ71RH2 274 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 SPATC1Q76KD6 591 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 SLC16A9Q7RTY1 509 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 NAA40Q86UY6 237 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 PARP8Q8N3A8 854 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 IQCF1Q8N6M8 205 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 PNLDC1Q8NA58 520 aaKnown RBP7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 PAPD5Q8NDF8 572 aaKnown RBP7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 ZNRF4Q8WWF5 429 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 UPRTQ96BW1 309 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 REEP6Q96HR9 211 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 NUDT16L1Q9BRJ7 211 aaKnown RBP7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 RTL8AQ9BWD3 113 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 PAPOLGQ9BWT3 736 aaKnown RBP7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 YIPF3Q9GZM5 350 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 RNPEPL1Q9HAU8 725 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 PAPOLBQ9NRJ5 636 aaKnown RBP7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 C1orf123Q9NWV4 160 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 LAMP5Q9UJQ1 280 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 POMPQ9Y244 141 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 MPC1Q9Y5U8 109 aa7.6□□□□□ -1.19
SNORD88A-201ENST00000408314 CUBNO60494 3623 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 IGHV3-64DA0A0J9YX35 117 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 KIR2DS1A0A191URI9 304 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 hCG_38984A0A1B0GV85 526 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 ACOD1A6NK06 481 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 TMEM210A6NLX4 147 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 TRAPPC2LH3BP13 241 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 GRPP07492 148 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 ATP6V1B1P15313 513 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 MUC1P15941 1255 aaPredicted RBP7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 PSMB10P40306 273 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 COMPP49747 757 aaPredicted RBP7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 PRSS12P56730 875 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 ZNF121P58317 390 aaPredicted RBP7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 ACTR3P61158 418 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 ESRRGP62508 458 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 FAM3AP98173 230 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 CDK5Q00535 292 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 FOXL1Q12952 345 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 SNAPC1Q16533 368 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 MICBQ29980 383 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 GFOD2Q3B7J2 385 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 ZNF829Q3KNS6 432 aaPredicted RBP7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 GPR157Q5UAW9 335 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 WDR25Q64LD2 544 aaPredicted RBP7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 C9orf139Q6ZV77 190 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 DOK3Q7L591 496 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 KRT77Q7Z794 578 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 CPOQ8IVL8 374 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 TIGD4Q8IY51 512 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 C3orf56Q8N813 242 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 THEM6Q8WUY1 208 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 ASB17Q8WXJ9 295 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 SLC25A28Q96A46 364 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 C12orf43Q96C57 262 aaKnown RBP7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 TECTBQ96PL2 329 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 MNTQ99583 582 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 MROQ9BYG7 248 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 MED20Q9H944 212 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 MMP26Q9NRE1 261 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 DNAJC27Q9NZQ0 273 aa7.59□□□□□ -1.19
SNORD88A-201ENST00000408314 TRAV40A0A0B4J280 105 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 TMEM89A2RUT3 159 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 NKX6-3A6NJ46 265 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 SLC22A31A6NKX4 558 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 CLDN34H7C241 214 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 P2RY10O00398 339 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 GPR37O15354 613 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 ADAM20O43506 726 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 ZNF254O75437 659 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 RGS9O75916 674 aaPredicted RBP7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 ZNF205O95201 554 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 PRTN3P24158 256 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 DCTDP32321 178 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 CD80P33681 288 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 PMELP40967 661 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 GSK3AP49840 483 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 CRISP1P54107 249 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 UBA52P62987 128 aaKnown RBP7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 DBPQ10586 325 aaPredicted RBP7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 MPPED2Q15777 294 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 METTL11BQ5VVY1 283 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 TEX36Q5VZQ5 186 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 SLC36A1Q7Z2H8 476 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 GALNT4Q8N4A0 578 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 BOLLQ8N9W6 283 aaKnown RBP7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 OR10Z1Q8NGY1 313 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 OR5K1Q8NHB7 308 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 FAM81AQ8TBF8 368 aa7.58□□□□□ -1.2
SNORD88A-201ENST00000408314 DVL3Q92997 716 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms