RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 PTTG3PQ9NZH4 202 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 MYEF2Q9P2K5 600 aaKnown RBP3.21□□□□□ -1.9
RTN4-208ENST00000404909 EIF3KQ9UBQ5 218 aaKnown RBP3.21□□□□□ -1.9
RTN4-208ENST00000404909 ATPIF1Q9UII2 106 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 FAM208BQ5VWN6 2430 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 LRRK2Q5S007 2527 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 FAM90A27PA6NNH2 459 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 M0R1B8 84 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 AIPO00170 330 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 MAGEB3O15480 346 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 XRCC2O43543 280 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 HCKP08631 526 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 CBR1P16152 277 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 ZNF12P17014 697 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 CFL1P23528 166 aaKnown RBP3.21□□□□□ -1.9
RTN4-208ENST00000404909 AZGP1P25311 298 aaKnown RBP3.21□□□□□ -1.9
RTN4-208ENST00000404909 BDKRB2P30411 391 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 WNT5AP41221 380 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 GSK3AP49840 483 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 RIPPLY1Q0D2K3 151 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 SNTB1Q13884 538 aaKnown RBP3.21□□□□□ -1.9
RTN4-208ENST00000404909 GLT8D1Q68CQ7 371 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 C16orf87Q6PH81 154 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 RFPL4BQ6ZWI9 263 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 MRPL21Q7Z2W9 205 aaKnown RBP3.21□□□□□ -1.9
RTN4-208ENST00000404909 MRGPRGQ86SM5 289 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 SNX29P2Q8IUI4 249 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 RELL2Q8NC24 303 aaPredicted RBP3.21□□□□□ -1.9
RTN4-208ENST00000404909 OR5H6Q8NGV6 325 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 LGALS14Q8TCE9 139 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 AKAP1Q92667 903 aaKnown RBP eCLIP3.21□□□□□ -1.9
RTN4-208ENST00000404909 GPER1Q99527 375 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 GAL3ST1Q99999 423 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 ZCCHC4Q9H5U6 513 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 TMEM138Q9NPI0 162 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 GPR173Q9NS66 373 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 FOXJ3Q9UPW0 622 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 A3GALT2U3KPV4 340 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 GGT3PA6NGU5 568 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 C16orf97H3BN30 126 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 SULT1B1O43704 296 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 IGKV3-15P01624 115 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 CECR9P0C854 216 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 HOXB1P14653 301 aaPredicted RBP3.21□□□□□ -1.9
RTN4-208ENST00000404909 IGFBP3P17936 291 aaPredicted RBP3.21□□□□□ -1.9
RTN4-208ENST00000404909 FSTP19883 344 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 PSMB1P20618 241 aaKnown RBP3.21□□□□□ -1.9
RTN4-208ENST00000404909 CCL1P22362 96 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 THBS2P35442 1172 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 DDOSTP39656 456 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 MAP2K3P46734 347 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 PSMD7P51665 324 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 ERVS71-1P61550 626 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 FAM3AP98173 230 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 PPA1Q15181 289 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 IGFBP7Q16270 282 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 FAM131AQ6UXB0 335 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 C22orf34Q6ZV56 151 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 C17orf78Q8N4C9 275 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 OR51D1Q8NGF3 324 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 OR56B2PQ8NGI1 322 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 OR5D18Q8NGL1 313 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 S100ZQ8WXG8 99 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 ACOT12Q8WYK0 555 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 PIGCQ92535 297 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 PIGTQ969N2 578 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 RFT1Q96AA3 541 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 ZNF75AQ96N20 296 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 DMRTA2Q96SC8 542 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 PAPOLGQ9BWT3 736 aaKnown RBP3.21□□□□□ -1.9
RTN4-208ENST00000404909 MIXL1Q9H2W2 232 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 KCNK15Q9H427 330 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 POFUT1Q9H488 388 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 RGCCQ9H4X1 137 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 PPP1R3EQ9H7J1 279 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 AKIP1Q9NQ31 210 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 COQ3Q9NZJ6 369 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 MRPS7Q9Y2R9 242 aaKnown RBP3.21□□□□□ -1.9
RTN4-208ENST00000404909 SLC25A15Q9Y619 301 aa3.21□□□□□ -1.9
RTN4-208ENST00000404909 ARPC4-TTLL3A0A0A6YYG9 625 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 hCG_38984A0A1B0GV85 526 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 FAM230AA0A1W2PPH8 454 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 MEGF11A6BM72 1044 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 FABP12A6NFH5 140 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 ATXN7O15265 892 aaPredicted RBP3.2□□□□□ -1.9
RTN4-208ENST00000404909 PLATP00750 562 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 IGLV3-1P01715 115 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 INHBBP09529 407 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 ELK1P19419 428 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 HTR2CP28335 458 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 ZNF93P35789 620 aaPredicted RBP3.2□□□□□ -1.9
RTN4-208ENST00000404909 TALDO1P37837 337 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 UQCRFS1P47985 274 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 IL18Q14116 193 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 ZNF846Q147U1 533 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 UBE2V2Q15819 145 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 RAB11BQ15907 218 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 TIMM23BQ5SRD1 257 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 OR2T2Q6IF00 324 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 CNIH2Q6PI25 160 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms