RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 SEMA6DQ8NFY4 1073 aa22.25■■□□□ 1.15
CPNE1-205ENST00000401607 SNRNP27Q8WVK2 155 aaKnown RBP22.25■■□□□ 1.15
CPNE1-205ENST00000401607 NANOS1Q8WY41 292 aaKnown RBP22.25■■□□□ 1.15
CPNE1-205ENST00000401607 POM121L2Q96KW2 1035 aa22.25■■□□□ 1.15
CPNE1-205ENST00000401607 TBCCD1Q9NVR7 557 aa22.25■■□□□ 1.15
CPNE1-205ENST00000401607 FAM215AQ9Y5M1 114 aa22.25■■□□□ 1.15
CPNE1-205ENST00000401607 hCG_38984A0A1B0GV85 526 aa22.24■■□□□ 1.15
CPNE1-205ENST00000401607 C5orf49A4QMS7 147 aa22.24■■□□□ 1.15
CPNE1-205ENST00000401607 WDR1O75083 606 aa22.24■■□□□ 1.15
CPNE1-205ENST00000401607 TOXO94900 526 aa22.24■■□□□ 1.15
CPNE1-205ENST00000401607 CD3GP09693 182 aa22.24■■□□□ 1.15
CPNE1-205ENST00000401607 PRF1P14222 555 aa22.24■■□□□ 1.15
CPNE1-205ENST00000401607 TAS2R20P59543 309 aa22.24■■□□□ 1.15
CPNE1-205ENST00000401607 CXADRP78310 365 aa22.24■■□□□ 1.15
CPNE1-205ENST00000401607 CD163Q86VB7 1156 aa22.24■■□□□ 1.15
CPNE1-205ENST00000401607 SMIM4Q8WVI0 70 aa22.24■■□□□ 1.15
CPNE1-205ENST00000401607 GCDHQ92947 438 aaPredicted RBP22.24■■□□□ 1.15
CPNE1-205ENST00000401607 SPSB4Q96A44 273 aa22.24■■□□□ 1.15
CPNE1-205ENST00000401607 ZNF75AQ96N20 296 aa22.24■■□□□ 1.15
CPNE1-205ENST00000401607 NEDD4LQ96PU5 975 aa22.24■■□□□ 1.15
CPNE1-205ENST00000401607 AUNIPQ9H7T9 357 aa22.24■■□□□ 1.15
CPNE1-205ENST00000401607 CIB4A0PJX0 185 aa22.23■■□□□ 1.15
CPNE1-205ENST00000401607 XRCC3O43542 346 aa22.23■■□□□ 1.15
CPNE1-205ENST00000401607 XRCC2O43543 280 aa22.23■■□□□ 1.15
CPNE1-205ENST00000401607 RAD51DO75771 328 aa22.23■■□□□ 1.15
CPNE1-205ENST00000401607 LYZL6O75951 148 aa22.23■■□□□ 1.15
CPNE1-205ENST00000401607 KDM4BO94953 1096 aa22.23■■□□□ 1.15
CPNE1-205ENST00000401607 ALX3O95076 343 aa22.23■■□□□ 1.15
CPNE1-205ENST00000401607 HCKP08631 526 aa22.23■■□□□ 1.15
CPNE1-205ENST00000401607 CCNOP22674 350 aa22.23■■□□□ 1.15
CPNE1-205ENST00000401607 TDGF1P3P51864 188 aa22.23■■□□□ 1.15
CPNE1-205ENST00000401607 FAM3AP98173 230 aa22.23■■□□□ 1.15
CPNE1-205ENST00000401607 PLP2Q04941 152 aa22.23■■□□□ 1.15
CPNE1-205ENST00000401607 DMRTC1Q5HYR2 192 aa22.23■■□□□ 1.15
CPNE1-205ENST00000401607 OR10K2Q6IF99 312 aa22.23■■□□□ 1.15
CPNE1-205ENST00000401607 CRIP3Q6Q6R5 217 aa22.23■■□□□ 1.15
CPNE1-205ENST00000401607 MDP1Q86V88 176 aa22.23■■□□□ 1.15
CPNE1-205ENST00000401607 SLC22A4Q9H015 551 aa22.23■■□□□ 1.15
CPNE1-205ENST00000401607 PLSCR4Q9NRQ2 329 aa22.23■■□□□ 1.15
CPNE1-205ENST00000401607 COX5AP20674 150 aa22.22■■□□□ 1.15
CPNE1-205ENST00000401607 INPP1P49441 399 aa22.22■■□□□ 1.15
CPNE1-205ENST00000401607 TGFBR3Q03167 851 aa22.22■■□□□ 1.15
CPNE1-205ENST00000401607 GABRA6Q16445 453 aa22.22■■□□□ 1.15
CPNE1-205ENST00000401607 C1orf185Q5T7R7 199 aa22.22■■□□□ 1.15
CPNE1-205ENST00000401607 ZNF57Q68EA5 555 aaPredicted RBP22.22■■□□□ 1.15
CPNE1-205ENST00000401607 RPRMLQ8N4K4 120 aa22.22■■□□□ 1.15
CPNE1-205ENST00000401607 MYEF2Q9P2K5 600 aaKnown RBP22.22■■□□□ 1.15
CPNE1-205ENST00000401607 FUOMA2VDF0 154 aa22.22■■□□□ 1.15
CPNE1-205ENST00000401607 CGAP01215 116 aa22.22■■□□□ 1.15
CPNE1-205ENST00000401607 FAM87AP0C7U9 286 aa22.22■■□□□ 1.15
CPNE1-205ENST00000401607 PTGER4P35408 488 aa22.22■■□□□ 1.15
CPNE1-205ENST00000401607 GSK3AP49840 483 aa22.22■■□□□ 1.15
CPNE1-205ENST00000401607 PER3P56645 1201 aa22.22■■□□□ 1.15
CPNE1-205ENST00000401607 QRFPP83859 136 aa22.22■■□□□ 1.15
CPNE1-205ENST00000401607 RIPPLY1Q0D2K3 151 aa22.22■■□□□ 1.15
CPNE1-205ENST00000401607 MTFR2Q6P444 385 aa22.22■■□□□ 1.15
CPNE1-205ENST00000401607 CISD2Q8N5K1 135 aaKnown RBP22.22■■□□□ 1.15
CPNE1-205ENST00000401607 FAM57AQ8TBR7 257 aa22.22■■□□□ 1.15
CPNE1-205ENST00000401607 AKAP1Q92667 903 aaKnown RBP eCLIP22.22■■□□□ 1.15
CPNE1-205ENST00000401607 STARD4Q96DR4 205 aa22.22■■□□□ 1.15
CPNE1-205ENST00000401607 MS4A3Q96HJ5 214 aa22.22■■□□□ 1.15
CPNE1-205ENST00000401607 CACNA1GO43497 2377 aa22.22■■□□□ 1.15
CPNE1-205ENST00000401607 ANKRD11Q6UB99 2663 aaPredicted RBP22.21■■□□□ 1.15
CPNE1-205ENST00000401607 GGT3PA6NGU5 568 aa22.21■■□□□ 1.15
CPNE1-205ENST00000401607 FIGNL2A6NMB9 653 aa22.21■■□□□ 1.15
CPNE1-205ENST00000401607 TPPPO94811 219 aa22.21■■□□□ 1.15
CPNE1-205ENST00000401607 BPNT1O95861 308 aa22.21■■□□□ 1.15
CPNE1-205ENST00000401607 PTHLHP12272 177 aa22.21■■□□□ 1.15
CPNE1-205ENST00000401607 MAP2K3P46734 347 aa22.21■■□□□ 1.15
CPNE1-205ENST00000401607 CAPZA1P52907 286 aa22.21■■□□□ 1.15
CPNE1-205ENST00000401607 OR8B8Q15620 311 aa22.21■■□□□ 1.15
CPNE1-205ENST00000401607 LINC00303Q3SY05 128 aa22.21■■□□□ 1.15
CPNE1-205ENST00000401607 HACD4Q5VWC8 232 aa22.21■■□□□ 1.15
CPNE1-205ENST00000401607 ANGPTL5Q86XS5 388 aa22.21■■□□□ 1.15
CPNE1-205ENST00000401607 GABRG1Q8N1C3 465 aa22.21■■□□□ 1.15
CPNE1-205ENST00000401607 PTX4Q96A99 478 aa22.21■■□□□ 1.15
CPNE1-205ENST00000401607 ATG5Q9H1Y0 275 aa22.21■■□□□ 1.15
CPNE1-205ENST00000401607 GTF3C1Q12789 2109 aa22.21■■□□□ 1.15
CPNE1-205ENST00000401607 CEP295Q9C0D2 2601 aa22.21■■□□□ 1.15
CPNE1-205ENST00000401607 LYRM1O43325 122 aa22.2■■□□□ 1.14
CPNE1-205ENST00000401607 OR3A4PP47883 348 aa22.2■■□□□ 1.14
CPNE1-205ENST00000401607 AWAT2Q6E213 333 aa22.2■■□□□ 1.14
CPNE1-205ENST00000401607 PAQR4Q8N4S7 273 aaPredicted RBP22.2■■□□□ 1.14
CPNE1-205ENST00000401607 NPRL2Q8WTW4 380 aa22.2■■□□□ 1.14
CPNE1-205ENST00000401607 DIABLOQ9NR28 239 aa22.2■■□□□ 1.14
CPNE1-205ENST00000401607 GPR173Q9NS66 373 aa22.2■■□□□ 1.14
CPNE1-205ENST00000401607 GABARAPH6UMI1 98 aa22.2■■□□□ 1.14
CPNE1-205ENST00000401607 RAB6AP20340 208 aa22.2■■□□□ 1.14
CPNE1-205ENST00000401607 SRP9P49458 86 aaKnown RBP22.2■■□□□ 1.14
CPNE1-205ENST00000401607 BCAP31P51572 246 aa22.2■■□□□ 1.14
CPNE1-205ENST00000401607 UNC119Q13432 240 aa22.2■■□□□ 1.14
CPNE1-205ENST00000401607 TSC22D1Q15714 1073 aa22.2■■□□□ 1.14
CPNE1-205ENST00000401607 CELF2-AS1Q8N7Q2 184 aa22.2■■□□□ 1.14
CPNE1-205ENST00000401607 NAXEQ8NCW5 288 aa22.2■■□□□ 1.14
CPNE1-205ENST00000401607 OR52I2Q8NH67 350 aa22.2■■□□□ 1.14
CPNE1-205ENST00000401607 C1orf147Q96MC9 270 aaPredicted RBP22.2■■□□□ 1.14
CPNE1-205ENST00000401607 PROCRQ9UNN8 238 aa22.2■■□□□ 1.14
CPNE1-205ENST00000401607 SERPINA5P05154 406 aa22.19■■□□□ 1.14
CPNE1-205ENST00000401607 VSIG8P0DPA2 414 aa22.19■■□□□ 1.14
CPNE1-205ENST00000401607 APLNRP35414 380 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms