RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 PNMA8CA0A1B0GUJ8 204 aa13.6□□□□□ -0.23
HMGA1-204ENST00000401473 IQCF6A8MYZ5 107 aa13.6□□□□□ -0.23
HMGA1-204ENST00000401473 TIMM8AO60220 97 aaPredicted RBP13.6□□□□□ -0.23
HMGA1-204ENST00000401473 ISG15P05161 165 aa13.6□□□□□ -0.23
HMGA1-204ENST00000401473 NAT2P11245 290 aa13.6□□□□□ -0.23
HMGA1-204ENST00000401473 ACSM1Q08AH1 577 aa13.6□□□□□ -0.23
HMGA1-204ENST00000401473 MRPL28Q13084 256 aaKnown RBP13.6□□□□□ -0.23
HMGA1-204ENST00000401473 OR8B8Q15620 311 aa13.6□□□□□ -0.23
HMGA1-204ENST00000401473 TBCEQ15813 527 aaPredicted RBP13.6□□□□□ -0.23
HMGA1-204ENST00000401473 ZNF773Q6PK81 442 aa13.6□□□□□ -0.23
HMGA1-204ENST00000401473 PAMR1Q6UXH9 720 aa13.6□□□□□ -0.23
HMGA1-204ENST00000401473 OR56B2PQ8NGI1 322 aa13.6□□□□□ -0.23
HMGA1-204ENST00000401473 TRIM36Q9NQ86 728 aa13.6□□□□□ -0.23
HMGA1-204ENST00000401473 ZNF391Q9UJN7 358 aa13.6□□□□□ -0.23
HMGA1-204ENST00000401473 A0A1W2PPW3 197 aa13.59□□□□□ -0.23
HMGA1-204ENST00000401473 GGT3PA6NGU5 568 aa13.59□□□□□ -0.23
HMGA1-204ENST00000401473 A6NIN4 97 aa13.59□□□□□ -0.23
HMGA1-204ENST00000401473 LMX1BO60663 402 aa13.59□□□□□ -0.23
HMGA1-204ENST00000401473 CELP19835 753 aa13.59□□□□□ -0.23
HMGA1-204ENST00000401473 CCL1P22362 96 aa13.59□□□□□ -0.23
HMGA1-204ENST00000401473 CDKN1AP38936 164 aa13.59□□□□□ -0.23
HMGA1-204ENST00000401473 MAGEB1P43366 347 aa13.59□□□□□ -0.23
HMGA1-204ENST00000401473 Q6ZSR3 168 aa13.59□□□□□ -0.23
HMGA1-204ENST00000401473 COMMD2Q86X83 199 aa13.59□□□□□ -0.23
HMGA1-204ENST00000401473 OR8G5Q8NG78 346 aa13.59□□□□□ -0.23
HMGA1-204ENST00000401473 OR14K1Q8NGZ2 314 aa13.59□□□□□ -0.23
HMGA1-204ENST00000401473 HAVCR2Q8TDQ0 301 aa13.59□□□□□ -0.23
HMGA1-204ENST00000401473 GHSRQ92847 366 aa13.59□□□□□ -0.23
HMGA1-204ENST00000401473 PGLYRP3Q96LB9 341 aa13.59□□□□□ -0.23
HMGA1-204ENST00000401473 NR1H4Q96RI1 486 aaPredicted RBP13.59□□□□□ -0.23
HMGA1-204ENST00000401473 OPA3Q9H6K4 179 aa13.59□□□□□ -0.23
HMGA1-204ENST00000401473 ZNF696Q9H7X3 374 aa13.59□□□□□ -0.23
HMGA1-204ENST00000401473 PLPP2O43688 288 aa13.59□□□□□ -0.23
HMGA1-204ENST00000401473 CFL1P23528 166 aaKnown RBP13.59□□□□□ -0.23
HMGA1-204ENST00000401473 SLC3A1Q07837 685 aa13.59□□□□□ -0.23
HMGA1-204ENST00000401473 NKPD1Q17RQ9 610 aa13.59□□□□□ -0.23
HMGA1-204ENST00000401473 OR5AK2Q8NH90 309 aa13.59□□□□□ -0.23
HMGA1-204ENST00000401473 RGP1Q92546 391 aaPredicted RBP13.59□□□□□ -0.23
HMGA1-204ENST00000401473 SMIM19Q96E16 107 aa13.59□□□□□ -0.23
HMGA1-204ENST00000401473 CCL19Q99731 98 aa13.59□□□□□ -0.23
HMGA1-204ENST00000401473 SLC30A2Q9BRI3 323 aa13.59□□□□□ -0.23
HMGA1-204ENST00000401473 CACNG6Q9BXT2 260 aa13.59□□□□□ -0.23
HMGA1-204ENST00000401473 PRRC2AP48634 2157 aaKnown RBP13.58□□□□□ -0.24
HMGA1-204ENST00000401473 LOC107986453A0A1B0GWG9 222 aa13.58□□□□□ -0.24
HMGA1-204ENST00000401473 LOC390937A0A1W2PQ73 354 aa13.58□□□□□ -0.24
HMGA1-204ENST00000401473 ZSCAN5BA6NJL1 495 aa13.58□□□□□ -0.24
HMGA1-204ENST00000401473 TMEM212A6NML5 194 aa13.58□□□□□ -0.24
HMGA1-204ENST00000401473 H0YL77 283 aa13.58□□□□□ -0.24
HMGA1-204ENST00000401473 M0R233 179 aa13.58□□□□□ -0.24
HMGA1-204ENST00000401473 SYT7O43581 403 aa13.58□□□□□ -0.24
HMGA1-204ENST00000401473 NDUFS7O75251 213 aa13.58□□□□□ -0.24
HMGA1-204ENST00000401473 DHRS3O75911 302 aa13.58□□□□□ -0.24
HMGA1-204ENST00000401473 HLA-DPB1P04440 258 aa13.58□□□□□ -0.24
HMGA1-204ENST00000401473 UBCP0CG48 685 aaKnown RBP13.58□□□□□ -0.24
HMGA1-204ENST00000401473 HSMCR30P0CW71 290 aa13.58□□□□□ -0.24
HMGA1-204ENST00000401473 SNRPD2P62316 118 aaKnown RBP13.58□□□□□ -0.24
HMGA1-204ENST00000401473 DMRTC1Q5HYR2 192 aa13.58□□□□□ -0.24
HMGA1-204ENST00000401473 TMEM244Q5VVB8 128 aa13.58□□□□□ -0.24
HMGA1-204ENST00000401473 ZNF676Q8N7Q3 588 aa13.58□□□□□ -0.24
HMGA1-204ENST00000401473 TSPAN14Q8NG11 270 aa13.58□□□□□ -0.24
HMGA1-204ENST00000401473 MGLLQ99685 303 aa13.58□□□□□ -0.24
HMGA1-204ENST00000401473 RHBDD3Q9Y3P4 386 aa13.58□□□□□ -0.24
HMGA1-204ENST00000401473 V9GYS6 101 aa13.58□□□□□ -0.24
HMGA1-204ENST00000401473 SELEP16581 610 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 CA6P23280 308 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 DDOSTP39656 456 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 RPS11P62280 158 aaKnown RBP eCLIP13.57□□□□□ -0.24
HMGA1-204ENST00000401473 BDH1Q02338 343 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 DOK3Q7L591 496 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 OPALINQ96PE5 141 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 VRK1Q99986 396 aaPredicted RBP13.57□□□□□ -0.24
HMGA1-204ENST00000401473 TPK1Q9H3S4 243 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 CREBBPQ92793 2442 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 A0A1B0GWJ7 208 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 PLSCR5A0PG75 271 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 C17orf100A8MU93 164 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 MLNRO43193 412 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 INMTO95050 263 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 RAF1P04049 648 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 FAHP16930 419 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 MAP2K3P46734 347 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 ZNF81P51508 661 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 MOGQ16653 247 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 SPRNQ5BIV9 151 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 UBE2UQ5VVX9 321 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 LIPKQ5VXJ0 399 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 KRT74Q7RTS7 529 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 SEMA6DQ8NFY4 1073 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 OR13C5Q8NGS8 318 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 MS4A5Q9H3V2 200 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 TMEM100Q9NV29 134 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 PIGLQ9Y2B2 252 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 PMF1-BGLAPU3KQ54 211 aa13.57□□□□□ -0.24
HMGA1-204ENST00000401473 A0A1B0GVI7 797 aa13.56□□□□□ -0.24
HMGA1-204ENST00000401473 SPRY3O43610 288 aa13.56□□□□□ -0.24
HMGA1-204ENST00000401473 MTRF1O75570 445 aaKnown RBP13.56□□□□□ -0.24
HMGA1-204ENST00000401473 IGHV1-46P01743 117 aa13.56□□□□□ -0.24
HMGA1-204ENST00000401473 LIPAP38571 399 aa13.56□□□□□ -0.24
HMGA1-204ENST00000401473 TAS2R43P59537 309 aa13.56□□□□□ -0.24
HMGA1-204ENST00000401473 TPBGQ13641 420 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms