RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 DIRC3C9JPN6 131 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 TMEM250H0YL14 139 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 SMIM13P0DJ93 91 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 FAHD1Q6P587 224 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 SLC16A12Q6ZSM3 486 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 RPS4Y2Q8TD47 263 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 SLC35A4Q96G79 324 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 WIPI2Q9Y4P8 454 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 CORINQ9Y5Q5 1042 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 BCL2L11O43521 198 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 SOD3P08294 240 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 NAT2P11245 290 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 EPXP11678 715 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 CR2P20023 1033 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 RPL32P62910 135 aaKnown RBP7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 ERV3-1Q14264 604 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 PLK5Q496M5 336 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 DEFB134Q4QY38 66 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 ZNF542PQ5EBM4 170 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 OLIG3Q7RTU3 272 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 PTRH1Q86Y79 214 aaKnown RBP7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 PRRC2AP48634 2157 aaKnown RBP7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 SMAD6O43541 496 aaKnown RBP7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 GCAP28676 217 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 HMGA2P52926 109 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 EDDM3AQ14507 147 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 ARSIQ5FYB1 569 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 TBPL2Q6SJ96 375 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 PLA2G12BQ9BX93 195 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 RAB33BQ9H082 229 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 NOX4Q9NPH5 578 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 MEIKINA0A087WXM9 373 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 ANKRD20A5PA0PJZ0 165 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 WDR5P61964 334 aaKnown RBP7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 TRAT1Q6PIZ9 186 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 SYT9Q86SS6 491 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 NIPSNAP1Q9BPW8 284 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 WNT16Q9UBV4 365 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 FAM53AQ6NSI3 398 aaPredicted RBP7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 PRO1933Q9H354 126 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 SAP30LQ9HAJ7 183 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 OCIAD1Q9NX40 245 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 ICAM5Q9UMF0 924 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 COL19A1Q14993 1142 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 CDC42EP5Q6NZY7 148 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 GPR137Q96N19 417 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 UNC13BO14795 1591 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 CD44P16070 742 aaKnown RBP7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 HAAOP46952 286 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 DSC1Q08554 894 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 MBTPS1Q14703 1052 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 DPY19L2P2Q6ZN68 376 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 SRD5A3Q9H8P0 318 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 INSL6Q9Y581 213 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 MRPL42Q9Y6G3 142 aaKnown RBP7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 LRCH4O75427 683 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 KCNA6P17658 529 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 MFAP5Q13361 173 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 SPHKAPQ2M3C7 1700 aa7.85□□□□□ -1.15
CACNA1C-220ENST00000399655 SMIM35A0A1B0GVV1 85 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 FAM3BP58499 235 aaPredicted RBP7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 LRRC10Q5BKY1 277 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 CGGBP1Q9UFW8 167 aaPredicted RBP7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 TRGV10A0A0A0MS01 117 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 NDUFC2O95298 119 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 PGA3P0DJD8 388 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 CALCBP10092 127 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 SUSD4Q5VX71 490 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 MARCH1Q8TCQ1 289 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 FER1L6-AS2Q96M78 137 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 SLC25A17O43808 307 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 GDF1P27539 372 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 TMPRSS3P57727 454 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 SELENOWP63302 87 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 IRF9Q00978 393 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 C2orf27AQ580R0 203 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 BAP18Q8IXM2 172 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 IL17REQ8NFR9 667 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 OR51H1Q8NH63 302 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 ANK1P16157 1881 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 AKR7A3O95154 331 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 CD1AP06126 327 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 ZBTB25P24278 435 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 PRDX2P32119 198 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 LGALS7P47929 136 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 KIAA1644Q3SXP7 199 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 GALNT16Q8N428 558 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 ZNF441Q8N8Z8 693 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 OLIG1Q8TAK6 271 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 UTP4Q969X6 686 aaKnown RBP7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 SLC17A4Q9Y2C5 497 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 RNF11Q9Y3C5 154 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 ZNF253O75346 499 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 GPR32O75388 356 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 RABIFP47224 123 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 ARRDC2Q8TBH0 407 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 SLAMF6Q96DU3 332 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 DCBLD2Q96PD2 775 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 RAB40CQ96S21 281 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms