RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 CEACAM16Q2WEN9 425 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 CYHR1Q6ZMK1 362 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 ZNF620Q6ZNG0 422 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 ANKRD37Q7Z713 158 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 SEH1LQ96EE3 360 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 S1PR3Q99500 378 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 NIPSNAP3BQ9BS92 247 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 A0A1W2PRD5 423 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 A0A1W2PRF3 423 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 A0A1W2PRM7 423 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 OR2A25A4D2G3 310 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 BSGP35613 385 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 GNG10P50151 68 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 SOX8P57073 446 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 OR10A3P58181 314 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 SLC38A9Q8NBW4 561 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 TMEM230Q96A57 120 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 CHST6Q9GZX3 395 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 NME2P1O60361 137 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 ETHE1O95571 254 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 BAMBIQ13145 260 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 GLCCI1Q86VQ1 547 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 ORAI1Q96D31 301 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 GON4LQ3T8J9 2241 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 C20orf202A1L168 122 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 DFFBO76075 338 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 GOSR1O95249 250 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 HPP00738 406 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 GPM6AP51674 278 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 GON7Q9BXV9 100 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 CDX4O14627 284 aaPredicted RBP12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 TFAP2AP05549 437 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 PNLIPRP2P54317 469 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 AGERQ15109 404 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 SHBQ15464 509 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 UGT2A1Q9Y4X1 527 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 CSAG2Q9Y5P2 127 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 KRBOX1C9JBD0 128 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 XRCC2O43543 280 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 EXOSC2Q13868 293 aaKnown RBP12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 DOC2BQ14184 412 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 EMC4Q5J8M3 183 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 CMC2Q9NRP2 79 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 V9GYS6 101 aa12.82□□□□□ -0.36
PCDHA11-201ENST00000398640 OR10K2Q6IF99 312 aa12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 NECAP1Q8NC96 275 aa12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 OLIG1Q8TAK6 271 aa12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 ZNF768Q9H5H4 540 aaKnown RBP12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 SPACA1Q9HBV2 294 aa12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 ZNF26P17031 533 aaPredicted RBP12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 DTYMKP23919 212 aa12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 CCR9P51686 369 aa12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 PCBP3P57721 371 aaKnown RBP12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 ZNF121P58317 390 aaPredicted RBP12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 UBE2MP61081 183 aaKnown RBP12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 ZNF816Q0VGE8 651 aaPredicted RBP12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 SPINK14Q6IE38 97 aa12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 SLC25A26Q70HW3 274 aa12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 LSRQ86X29 649 aaPredicted RBP12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 VN1R1Q9GZP7 353 aa12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 TCFL5Q9UL49 500 aa12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 LYZL6O75951 148 aa12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 ZNF85Q03923 595 aa12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 GSG1Q2KHT4 349 aa12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 KLHDC8BQ8IXV7 354 aa12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 KCNRGQ8N5I3 272 aa12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 SLC35B4Q969S0 331 aa12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 COMMD5Q9GZQ3 224 aa12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 SLC25A37Q9NYZ2 338 aa12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 TXNDC12O95881 172 aa12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 CT45A10P0DMU9 189 aa12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 PCK2Q16822 640 aa12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 HFEQ30201 348 aa12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 SLC23A3Q6PIS1 610 aa12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 SNTB1Q13884 538 aaKnown RBP12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 ACER2Q5QJU3 275 aa12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 TMUB2Q71RG4 321 aa12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 MOB1AQ9H8S9 216 aa12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 GDF2Q9UK05 429 aaPredicted RBP12.81□□□□□ -0.36
PCDHA11-201ENST00000398640 CTXN2P0C2S0 81 aa12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 S100A11P31949 105 aa12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 ERHP84090 104 aaKnown RBP12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 ZNF705AQ6ZN79 300 aaPredicted RBP12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 NUDCD2Q8WVJ2 157 aa12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 SEC14L6B5MCN3 397 aa12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 GP1BAP07359 652 aa12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 TMIGD3P0DMS9 266 aaPredicted RBP12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 DGCR2P98153 550 aa12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 RPL7L1Q6DKI1 246 aaKnown RBP12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 ZFP62Q8NB50 900 aaPredicted RBP12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 TTC9Q92623 222 aa12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 SLC25A21Q9BQT8 299 aaPredicted RBP12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 ISG20L2Q9H9L3 353 aaKnown RBP12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 UCK1Q9HA47 277 aa12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 AK3Q9UIJ7 227 aa12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 ANKUB1A6NFN9 424 aa12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 HAGHQ16775 308 aa12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 TMEM268Q5VZI3 342 aa12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 TSEN54Q7Z6J9 526 aaKnown RBP12.8□□□□□ -0.36
PCDHA11-201ENST00000398640 KDF1Q8NAX2 398 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms