RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 OR8B12Q8NGG6 310 aa16.22■□□□□ 0.19
CHRFAM7A-202ENST00000397827 OR6X1Q8NH79 312 aa16.22■□□□□ 0.19
CHRFAM7A-202ENST00000397827 TCEAL3Q969E4 200 aa16.22■□□□□ 0.19
CHRFAM7A-202ENST00000397827 FAM71F1Q96KD3 344 aaPredicted RBP16.22■□□□□ 0.19
CHRFAM7A-202ENST00000397827 GNRHR2Q96P88 292 aa16.22■□□□□ 0.19
CHRFAM7A-202ENST00000397827 SLC25A21Q9BQT8 299 aaPredicted RBP16.22■□□□□ 0.19
CHRFAM7A-202ENST00000397827 ZNF726A6NNF4 738 aa16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 PMS2P2O95744 297 aa16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 CD74P04233 296 aa16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 CCL4P13236 92 aa16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 ZNF20P17024 532 aa16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 ZNF93P35789 620 aaPredicted RBP16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 C12orf45Q8N5I9 185 aaPredicted RBP16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 EIF4E3Q8N5X7 224 aaKnown RBP16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 CYYR1Q96J86 154 aa16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 ZNF251Q9BRH9 671 aa16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 NICN1Q9BSH3 213 aa16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 ARL6Q9H0F7 186 aa16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 ALX4Q9H161 411 aaPredicted RBP16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 GPR84Q9NQS5 396 aa16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 PISDQ9UG56 409 aa16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 ZNF230Q9UIE0 474 aaPredicted RBP16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 TMEM265A0A087WTH1 108 aa16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 S100A11P31949 105 aa16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 CLDN17P56750 224 aa16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 HLXQ14774 488 aaPredicted RBP16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 ZFP82Q8N141 532 aa16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 ADPRHL1Q8NDY3 354 aa16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 CCDC107Q8WV48 283 aa16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 NAT6Q93015 286 aa16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 MR1Q95460 341 aa16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 NARS2Q96I59 477 aaKnown RBP16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 SELENOIQ9C0D9 397 aa16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 PTRH2Q9Y3E5 179 aaKnown RBP16.21■□□□□ 0.19
CHRFAM7A-202ENST00000397827 IGHV3-15A0A0B4J1V0 119 aa16.21■□□□□ 0.18
CHRFAM7A-202ENST00000397827 IFNA4P05014 189 aa16.21■□□□□ 0.18
CHRFAM7A-202ENST00000397827 MELTFP08582 738 aa16.21■□□□□ 0.18
CHRFAM7A-202ENST00000397827 CXADRP78310 365 aa16.21■□□□□ 0.18
CHRFAM7A-202ENST00000397827 SGCAQ16586 387 aa16.21■□□□□ 0.18
CHRFAM7A-202ENST00000397827 HAGHLQ6PII5 290 aaPredicted RBP16.21■□□□□ 0.18
CHRFAM7A-202ENST00000397827 DBX2Q6ZNG2 339 aa16.21■□□□□ 0.18
CHRFAM7A-202ENST00000397827 TMUB2Q71RG4 321 aa16.21■□□□□ 0.18
CHRFAM7A-202ENST00000397827 ZNF101Q8IZC7 436 aa16.21■□□□□ 0.18
CHRFAM7A-202ENST00000397827 PNRC2Q9NPJ4 139 aaKnown RBP16.21■□□□□ 0.18
CHRFAM7A-202ENST00000397827 AQP7P3A6NL99 342 aa16.2■□□□□ 0.18
CHRFAM7A-202ENST00000397827 TP53I11O14683 189 aa16.2■□□□□ 0.18
CHRFAM7A-202ENST00000397827 PDGFBP01127 241 aaPredicted RBP16.2■□□□□ 0.18
CHRFAM7A-202ENST00000397827 S100A9P06702 114 aaKnown RBP16.2■□□□□ 0.18
CHRFAM7A-202ENST00000397827 UMODP07911 640 aa16.2■□□□□ 0.18
CHRFAM7A-202ENST00000397827 FGF5P12034 268 aa16.2■□□□□ 0.18
CHRFAM7A-202ENST00000397827 PVALBP20472 110 aaPredicted RBP16.2■□□□□ 0.18
CHRFAM7A-202ENST00000397827 LY6G6FQ5SQ64 297 aa16.2■□□□□ 0.18
CHRFAM7A-202ENST00000397827 RAB12Q6IQ22 244 aa16.2■□□□□ 0.18
CHRFAM7A-202ENST00000397827 JSRP1Q96MG2 331 aaPredicted RBP16.2■□□□□ 0.18
CHRFAM7A-202ENST00000397827 GPN3Q9UHW5 284 aaPredicted RBP16.2■□□□□ 0.18
CHRFAM7A-202ENST00000397827 PMS2P1A4D2B8 440 aa16.2■□□□□ 0.18
CHRFAM7A-202ENST00000397827 C5orf63A6NC05 138 aa16.2■□□□□ 0.18
CHRFAM7A-202ENST00000397827 BPNT1O95861 308 aa16.2■□□□□ 0.18
CHRFAM7A-202ENST00000397827 CCL3P10147 92 aa16.2■□□□□ 0.18
CHRFAM7A-202ENST00000397827 SPP1P10451 314 aa16.2■□□□□ 0.18
CHRFAM7A-202ENST00000397827 DHRS2Q13268 280 aa16.2■□□□□ 0.18
CHRFAM7A-202ENST00000397827 ZNF124Q15973 351 aa16.2■□□□□ 0.18
CHRFAM7A-202ENST00000397827 RNASE10Q5GAN6 216 aaKnown RBP16.2■□□□□ 0.18
CHRFAM7A-202ENST00000397827 FAM74A1Q5RGS3 127 aa16.2■□□□□ 0.18
CHRFAM7A-202ENST00000397827 TMPPEQ6ZT21 453 aa16.2■□□□□ 0.18
CHRFAM7A-202ENST00000397827 FAM57BQ71RH2 274 aa16.2■□□□□ 0.18
CHRFAM7A-202ENST00000397827 VSIG4Q9Y279 399 aa16.2■□□□□ 0.18
CHRFAM7A-202ENST00000397827 IGHV1-45A0A0A0MS14 117 aa16.19■□□□□ 0.18
CHRFAM7A-202ENST00000397827 OR14I1A6ND48 311 aa16.19■□□□□ 0.18
CHRFAM7A-202ENST00000397827 HMSDA8MTL9 139 aa16.19■□□□□ 0.18
CHRFAM7A-202ENST00000397827 E9PLN8 166 aa16.19■□□□□ 0.18
CHRFAM7A-202ENST00000397827 RP2O75695 350 aa16.19■□□□□ 0.18
CHRFAM7A-202ENST00000397827 ZNF17P17021 662 aa16.19■□□□□ 0.18
CHRFAM7A-202ENST00000397827 PTAFRP25105 342 aa16.19■□□□□ 0.18
CHRFAM7A-202ENST00000397827 CX3CR1P49238 355 aa16.19■□□□□ 0.18
CHRFAM7A-202ENST00000397827 ZNF529Q6P280 563 aa16.19■□□□□ 0.18
CHRFAM7A-202ENST00000397827 RBMS3Q6XE24 437 aaKnown RBP16.19■□□□□ 0.18
CHRFAM7A-202ENST00000397827 NAA40Q86UY6 237 aa16.19■□□□□ 0.18
CHRFAM7A-202ENST00000397827 TMEM104Q8NE00 496 aa16.19■□□□□ 0.18
CHRFAM7A-202ENST00000397827 STEAP2Q8NFT2 490 aa16.19■□□□□ 0.18
CHRFAM7A-202ENST00000397827 SLC25A43Q8WUT9 341 aaPredicted RBP16.19■□□□□ 0.18
CHRFAM7A-202ENST00000397827 PRDM6Q9NQX0 595 aa16.19■□□□□ 0.18
CHRFAM7A-202ENST00000397827 HDGFL3Q9Y3E1 203 aa16.19■□□□□ 0.18
CHRFAM7A-202ENST00000397827 PPP3CBP16298 524 aa16.19■□□□□ 0.18
CHRFAM7A-202ENST00000397827 OR3A4PP47883 348 aa16.19■□□□□ 0.18
CHRFAM7A-202ENST00000397827 HIST3H3Q16695 136 aa16.19■□□□□ 0.18
CHRFAM7A-202ENST00000397827 Q7L0L9 218 aa16.19■□□□□ 0.18
CHRFAM7A-202ENST00000397827 ZNF283Q8N7M2 679 aa16.19■□□□□ 0.18
CHRFAM7A-202ENST00000397827 EDAQ92838 391 aa16.19■□□□□ 0.18
CHRFAM7A-202ENST00000397827 MRGPRFQ96AM1 343 aa16.19■□□□□ 0.18
CHRFAM7A-202ENST00000397827 A0A1W2PP11 408 aa16.18■□□□□ 0.18
CHRFAM7A-202ENST00000397827 HTR3BO95264 441 aa16.18■□□□□ 0.18
CHRFAM7A-202ENST00000397827 HLA-AP01891 365 aaKnown RBP16.18■□□□□ 0.18
CHRFAM7A-202ENST00000397827 KLK3P07288 261 aaPredicted RBP16.18■□□□□ 0.18
CHRFAM7A-202ENST00000397827 HRH1P35367 487 aa16.18■□□□□ 0.18
CHRFAM7A-202ENST00000397827 RFC3P40938 356 aa16.18■□□□□ 0.18
CHRFAM7A-202ENST00000397827 GLIPR1L1Q6UWM5 242 aa16.18■□□□□ 0.18
CHRFAM7A-202ENST00000397827 OR5AS1Q8N127 324 aa16.18■□□□□ 0.18
CHRFAM7A-202ENST00000397827 PDCD10Q9BUL8 212 aa16.18■□□□□ 0.18
CHRFAM7A-202ENST00000397827 EDEM2Q9BV94 578 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms