RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 SSMEM1Q8WWF3 244 aa13.37□□□□□ -0.27
CUX2-202ENST00000397643 DYRK2Q92630 601 aa13.37□□□□□ -0.27
CUX2-202ENST00000397643 PTP4A1Q93096 173 aa13.37□□□□□ -0.27
CUX2-202ENST00000397643 FAM71F1Q96KD3 344 aaPredicted RBP13.37□□□□□ -0.27
CUX2-202ENST00000397643 TBX15Q96SF7 602 aa13.37□□□□□ -0.27
CUX2-202ENST00000397643 WACQ9BTA9 647 aa13.37□□□□□ -0.27
CUX2-202ENST00000397643 ASH2LQ9UBL3 628 aa13.37□□□□□ -0.27
CUX2-202ENST00000397643 CLN8Q9UBY8 286 aa13.37□□□□□ -0.27
CUX2-202ENST00000397643 IGHV3-64DA0A0J9YX35 117 aa13.36□□□□□ -0.27
CUX2-202ENST00000397643 A0A1B0GWJ7 208 aa13.36□□□□□ -0.27
CUX2-202ENST00000397643 PRSS37A4D1T9 235 aa13.36□□□□□ -0.27
CUX2-202ENST00000397643 OR6C6A6NF89 314 aa13.36□□□□□ -0.27
CUX2-202ENST00000397643 H0YJX3 145 aa13.36□□□□□ -0.27
CUX2-202ENST00000397643 H7C1C5 153 aa13.36□□□□□ -0.27
CUX2-202ENST00000397643 SGCEO43556 437 aa13.36□□□□□ -0.27
CUX2-202ENST00000397643 GPR137BO60478 399 aa13.36□□□□□ -0.27
CUX2-202ENST00000397643 RENP00797 406 aa13.36□□□□□ -0.27
CUX2-202ENST00000397643 HIST1H1CP16403 213 aaKnown RBP13.36□□□□□ -0.27
CUX2-202ENST00000397643 EPHA2P29317 976 aa13.36□□□□□ -0.27
CUX2-202ENST00000397643 LCN6P62502 163 aa13.36□□□□□ -0.27
CUX2-202ENST00000397643 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.36□□□□□ -0.27
CUX2-202ENST00000397643 SCRN3Q0VDG4 424 aa13.36□□□□□ -0.27
CUX2-202ENST00000397643 SNCBQ16143 134 aa13.36□□□□□ -0.27
CUX2-202ENST00000397643 SLX4IPQ5VYV7 408 aa13.36□□□□□ -0.27
CUX2-202ENST00000397643 OR2T2Q6IF00 324 aa13.36□□□□□ -0.27
CUX2-202ENST00000397643 FBXW12Q6X9E4 464 aa13.36□□□□□ -0.27
CUX2-202ENST00000397643 NLRC3Q7RTR2 1065 aa13.36□□□□□ -0.27
CUX2-202ENST00000397643 OR8G5Q8NG78 346 aa13.36□□□□□ -0.27
CUX2-202ENST00000397643 OR4K13Q8NH42 304 aa13.36□□□□□ -0.27
CUX2-202ENST00000397643 MBOAT4Q96T53 435 aa13.36□□□□□ -0.27
CUX2-202ENST00000397643 CMC2Q9NRP2 79 aa13.36□□□□□ -0.27
CUX2-202ENST00000397643 TVP23BQ9NYZ1 205 aa13.36□□□□□ -0.27
CUX2-202ENST00000397643 DNAH3Q8TD57 4116 aa13.35□□□□□ -0.27
CUX2-202ENST00000397643 CENPVL3A0A0U1RRI6 287 aa13.35□□□□□ -0.27
CUX2-202ENST00000397643 F5H5P2 479 aa13.35□□□□□ -0.27
CUX2-202ENST00000397643 ENSAO43768 121 aaKnown RBP13.35□□□□□ -0.27
CUX2-202ENST00000397643 ZNF3P17036 446 aa13.35□□□□□ -0.27
CUX2-202ENST00000397643 PSMB10P40306 273 aa13.35□□□□□ -0.27
CUX2-202ENST00000397643 VHLP40337 213 aa13.35□□□□□ -0.27
CUX2-202ENST00000397643 CDKN2AP42771 156 aaKnown RBP13.35□□□□□ -0.27
CUX2-202ENST00000397643 GUCA1AP43080 201 aaPredicted RBP13.35□□□□□ -0.27
CUX2-202ENST00000397643 SRP9P49458 86 aaKnown RBP13.35□□□□□ -0.27
CUX2-202ENST00000397643 CDC42P60953 191 aa13.35□□□□□ -0.27
CUX2-202ENST00000397643 SNAPC1Q16533 368 aa13.35□□□□□ -0.27
CUX2-202ENST00000397643 OTPQ5XKR4 325 aa13.35□□□□□ -0.27
CUX2-202ENST00000397643 C12orf73Q69YU5 71 aa13.35□□□□□ -0.27
CUX2-202ENST00000397643 DHRSXQ8N5I4 330 aa13.35□□□□□ -0.27
CUX2-202ENST00000397643 OR13G1Q8NGZ3 307 aa13.35□□□□□ -0.27
CUX2-202ENST00000397643 COG8Q96MW5 612 aa13.35□□□□□ -0.27
CUX2-202ENST00000397643 NMNAT3Q96T66 252 aa13.35□□□□□ -0.27
CUX2-202ENST00000397643 SLC30A2Q9BRI3 323 aa13.35□□□□□ -0.27
CUX2-202ENST00000397643 PCGF1Q9BSM1 259 aa13.35□□□□□ -0.27
CUX2-202ENST00000397643 FAM118AQ9NWS6 357 aa13.35□□□□□ -0.27
CUX2-202ENST00000397643 GMPPBQ9Y5P6 360 aa13.35□□□□□ -0.27
CUX2-202ENST00000397643 LOC100130705A0A1B0GUX0 176 aa13.34□□□□□ -0.27
CUX2-202ENST00000397643 J3QW42 95 aa13.34□□□□□ -0.27
CUX2-202ENST00000397643 P2RY10O00398 339 aa13.34□□□□□ -0.27
CUX2-202ENST00000397643 DLGAP1O14490 977 aa13.34□□□□□ -0.27
CUX2-202ENST00000397643 SLC16A6O15403 523 aa13.34□□□□□ -0.27
CUX2-202ENST00000397643 IGHV4-59P01825 116 aa13.34□□□□□ -0.27
CUX2-202ENST00000397643 DBHP09172 617 aa13.34□□□□□ -0.27
CUX2-202ENST00000397643 PAICSP22234 425 aaKnown RBP13.34□□□□□ -0.27
CUX2-202ENST00000397643 GATA4P43694 442 aa13.34□□□□□ -0.27
CUX2-202ENST00000397643 HOXA4Q00056 320 aaPredicted RBP13.34□□□□□ -0.27
CUX2-202ENST00000397643 TTC23Q5W5X9 447 aa13.34□□□□□ -0.27
CUX2-202ENST00000397643 DNM1P34Q6PK57 102 aa13.34□□□□□ -0.27
CUX2-202ENST00000397643 DCDC5Q6ZRR9 648 aa13.34□□□□□ -0.27
CUX2-202ENST00000397643 PTCHD4Q6ZW05 846 aa13.34□□□□□ -0.27
CUX2-202ENST00000397643 LDLRAD3Q86YD5 345 aa13.34□□□□□ -0.27
CUX2-202ENST00000397643 SLC37A3Q8NCC5 494 aa13.34□□□□□ -0.27
CUX2-202ENST00000397643 C19orf18Q8NEA5 215 aa13.34□□□□□ -0.27
CUX2-202ENST00000397643 SDR9C7Q8NEX9 313 aa13.34□□□□□ -0.27
CUX2-202ENST00000397643 CYGBQ8WWM9 190 aa13.34□□□□□ -0.27
CUX2-202ENST00000397643 HRASLS5Q96KN8 279 aa13.34□□□□□ -0.27
CUX2-202ENST00000397643 TCF7L1Q9HCS4 588 aa13.34□□□□□ -0.27
CUX2-202ENST00000397643 PTTG3PQ9NZH4 202 aa13.34□□□□□ -0.27
CUX2-202ENST00000397643 VSX1Q9NZR4 365 aaPredicted RBP13.34□□□□□ -0.27
CUX2-202ENST00000397643 CTSZQ9UBR2 303 aa13.34□□□□□ -0.27
CUX2-202ENST00000397643 LRRC30A6NM36 301 aa13.33□□□□□ -0.28
CUX2-202ENST00000397643 IQCF6A8MYZ5 107 aa13.33□□□□□ -0.28
CUX2-202ENST00000397643 ZNF879B4DU55 563 aa13.33□□□□□ -0.28
CUX2-202ENST00000397643 CTLA4P16410 223 aa13.33□□□□□ -0.28
CUX2-202ENST00000397643 CRABP1P29762 137 aa13.33□□□□□ -0.28
CUX2-202ENST00000397643 GGT2P36268 569 aa13.33□□□□□ -0.28
CUX2-202ENST00000397643 HSPA13P48723 471 aa13.33□□□□□ -0.28
CUX2-202ENST00000397643 AQP6Q13520 282 aa13.33□□□□□ -0.28
CUX2-202ENST00000397643 CRMP1Q14194 572 aa13.33□□□□□ -0.28
CUX2-202ENST00000397643 BEAN1Q3B7T3 259 aa13.33□□□□□ -0.28
CUX2-202ENST00000397643 CCDC92Q53HC0 331 aaPredicted RBP13.33□□□□□ -0.28
CUX2-202ENST00000397643 Q6ZSV7 163 aa13.33□□□□□ -0.28
CUX2-202ENST00000397643 C1orf87Q8N0U7 546 aa13.33□□□□□ -0.28
CUX2-202ENST00000397643 FAM110DQ8TAY7 271 aaPredicted RBP13.33□□□□□ -0.28
CUX2-202ENST00000397643 Q8TCH9 128 aa13.33□□□□□ -0.28
CUX2-202ENST00000397643 GATAD2BQ8WXI9 593 aa13.33□□□□□ -0.28
CUX2-202ENST00000397643 PITX2Q99697 317 aa13.33□□□□□ -0.28
CUX2-202ENST00000397643 SYT4Q9H2B2 425 aa13.33□□□□□ -0.28
CUX2-202ENST00000397643 ACOXLQ9NUZ1 547 aa13.33□□□□□ -0.28
CUX2-202ENST00000397643 IMPAD1Q9NX62 359 aa13.33□□□□□ -0.28
CUX2-202ENST00000397643 OR6C68A6NDL8 312 aa13.32□□□□□ -0.28
CUX2-202ENST00000397643 PRR23D1E9PI22 279 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms