RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 WDR38Q5JTN6 314 aa7.65□□□□□ -1.18
NEDD9-203ENST00000397378 NKAPLQ5M9Q1 402 aa7.65□□□□□ -1.18
NEDD9-203ENST00000397378 SLC18B1Q6NT16 456 aa7.65□□□□□ -1.18
NEDD9-203ENST00000397378 DNM1P34Q6PK57 102 aa7.65□□□□□ -1.18
NEDD9-203ENST00000397378 DUX4L9Q6RFH8 374 aaPredicted RBP7.65□□□□□ -1.18
NEDD9-203ENST00000397378 CFAP77Q6ZQR2 320 aa7.65□□□□□ -1.18
NEDD9-203ENST00000397378 LIAT1Q6ZQX7 453 aa7.65□□□□□ -1.18
NEDD9-203ENST00000397378 PTCHD4Q6ZW05 846 aa7.65□□□□□ -1.18
NEDD9-203ENST00000397378 MBOAT2Q6ZWT7 520 aa7.65□□□□□ -1.18
NEDD9-203ENST00000397378 TSEN54Q7Z6J9 526 aaKnown RBP7.65□□□□□ -1.18
NEDD9-203ENST00000397378 PNKDQ8N490 385 aa7.65□□□□□ -1.18
NEDD9-203ENST00000397378 SDR9C7Q8NEX9 313 aa7.65□□□□□ -1.18
NEDD9-203ENST00000397378 SLC26A10Q8NG04 563 aa7.65□□□□□ -1.18
NEDD9-203ENST00000397378 SLC7A13Q8TCU3 470 aa7.65□□□□□ -1.18
NEDD9-203ENST00000397378 TLCD1Q96CP7 247 aa7.65□□□□□ -1.18
NEDD9-203ENST00000397378 CCL13Q99616 98 aa7.65□□□□□ -1.18
NEDD9-203ENST00000397378 PITX2Q99697 317 aa7.65□□□□□ -1.18
NEDD9-203ENST00000397378 SH3GL1Q99961 368 aa7.65□□□□□ -1.18
NEDD9-203ENST00000397378 FNDC11Q9BVV2 318 aa7.65□□□□□ -1.18
NEDD9-203ENST00000397378 NPFFR1Q9GZQ6 430 aa7.65□□□□□ -1.18
NEDD9-203ENST00000397378 MEGF9Q9H1U4 602 aa7.65□□□□□ -1.18
NEDD9-203ENST00000397378 METTL8Q9H825 291 aaKnown RBP7.65□□□□□ -1.18
NEDD9-203ENST00000397378 PNRC2Q9NPJ4 139 aaKnown RBP7.65□□□□□ -1.18
NEDD9-203ENST00000397378 C14orf119Q9NWQ9 140 aa7.65□□□□□ -1.18
NEDD9-203ENST00000397378 DUX4Q9UBX2 424 aa7.65□□□□□ -1.18
NEDD9-203ENST00000397378 TMEM5Q9Y2B1 443 aa7.65□□□□□ -1.18
NEDD9-203ENST00000397378 IGLV1-36A0A0B4J1U3 117 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-203ENST00000397378 MEGF11A6BM72 1044 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 GGT3PA6NGU5 568 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-203ENST00000397378 M0R135 149 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 M0R1W7 72 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 DCTN6O00399 190 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 BHLHE40O14503 412 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 SOCS2O14508 198 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 FFAR1O14842 300 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 NDUFB3O43676 98 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 PEX14O75381 377 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 TXNDC12O95881 172 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 IFNW1P05000 195 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 KDELR2P33947 212 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 GRK5P34947 590 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 GGT2P36268 569 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 CDKN2AP42771 156 aaKnown RBP7.64□□□□□ -1.19
NEDD9-203ENST00000397378 TGM4P49221 684 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 TPTEP56180 551 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 ZNF92Q03936 586 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 PRB3Q04118 309 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-203ENST00000397378 LRRC75BQ2VPJ9 315 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 LRRC23Q53EV4 343 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-203ENST00000397378 LRRC10Q5BKY1 277 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 RABL3Q5HYI8 236 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 ATPAF1Q5TC12 328 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-203ENST00000397378 ZNF730Q6ZMV8 503 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 C11orf53Q8IXP5 236 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 Q8N2B8 174 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 FAM216BQ8N7L0 139 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 OR8J3Q8NGG0 315 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 OR51G2Q8NGK0 314 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 WIPF2Q8TF74 440 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-203ENST00000397378 C12orf43Q96C57 262 aaKnown RBP7.64□□□□□ -1.19
NEDD9-203ENST00000397378 ZNF799Q96GE5 643 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 TPD52L3Q96J77 140 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 TSSK2Q96PF2 358 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 NKX3-1Q99801 234 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-203ENST00000397378 PARD6BQ9BYG5 372 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 DNTTIP1Q9H147 329 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 SERTAD4Q9NUC0 356 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 RHCGQ9UBD6 479 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 CYB5R1Q9UHQ9 305 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 SIGLEC7Q9Y286 467 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 SNX13Q9Y5W8 968 aa7.64□□□□□ -1.19
NEDD9-203ENST00000397378 STAB2Q8WWQ8 2551 aa7.63□□□□□ -1.19
NEDD9-203ENST00000397378 J3KTA2 159 aa7.63□□□□□ -1.19
NEDD9-203ENST00000397378 FXYD1O00168 92 aa7.63□□□□□ -1.19
NEDD9-203ENST00000397378 ANGPTL7O43827 346 aa7.63□□□□□ -1.19
NEDD9-203ENST00000397378 AMY2BP19961 511 aa7.63□□□□□ -1.19
NEDD9-203ENST00000397378 OTX1P32242 354 aaPredicted RBP7.63□□□□□ -1.19
NEDD9-203ENST00000397378 YAP1P46937 504 aaKnown RBP7.63□□□□□ -1.19
NEDD9-203ENST00000397378 CENPAP49450 140 aa7.63□□□□□ -1.19
NEDD9-203ENST00000397378 ELF3P78545 371 aaPredicted RBP7.63□□□□□ -1.19
NEDD9-203ENST00000397378 RFX4Q33E94 735 aa7.63□□□□□ -1.19
NEDD9-203ENST00000397378 SNAI3Q3KNW1 292 aa7.63□□□□□ -1.19
NEDD9-203ENST00000397378 SLC36A3Q495N2 470 aa7.63□□□□□ -1.19
NEDD9-203ENST00000397378 TBPL2Q6SJ96 375 aa7.63□□□□□ -1.19
NEDD9-203ENST00000397378 DPY19L2P2Q6ZN68 376 aa7.63□□□□□ -1.19
NEDD9-203ENST00000397378 RRM2BQ7LG56 351 aa7.63□□□□□ -1.19
NEDD9-203ENST00000397378 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.63□□□□□ -1.19
NEDD9-203ENST00000397378 LINC00346Q8IVM7 164 aa7.63□□□□□ -1.19
NEDD9-203ENST00000397378 OR6V1Q8N148 313 aa7.63□□□□□ -1.19
NEDD9-203ENST00000397378 OR2AJ1Q8NGZ0 328 aa7.63□□□□□ -1.19
NEDD9-203ENST00000397378 OR2AE1Q8NHA4 323 aa7.63□□□□□ -1.19
NEDD9-203ENST00000397378 LRRC29Q8WV35 223 aa7.63□□□□□ -1.19
NEDD9-203ENST00000397378 LZICQ8WZA0 190 aa7.63□□□□□ -1.19
NEDD9-203ENST00000397378 AJUBAQ96IF1 538 aa7.63□□□□□ -1.19
NEDD9-203ENST00000397378 GPR61Q9BZJ8 451 aa7.63□□□□□ -1.19
NEDD9-203ENST00000397378 ANKRD19PQ9H560 264 aa7.63□□□□□ -1.19
NEDD9-203ENST00000397378 OPA3Q9H6K4 179 aa7.63□□□□□ -1.19
NEDD9-203ENST00000397378 DNAJB11Q9UBS4 358 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms