RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 ALOX5APP20292 161 aa11.7□□□□□ -0.54
SEC13-204ENST00000397099 GNALP38405 381 aa11.7□□□□□ -0.54
SEC13-204ENST00000397099 ZNF121P58317 390 aaPredicted RBP11.7□□□□□ -0.54
SEC13-204ENST00000397099 PSMA6P60900 246 aaKnown RBP11.7□□□□□ -0.54
SEC13-204ENST00000397099 FAM3AP98173 230 aa11.7□□□□□ -0.54
SEC13-204ENST00000397099 IL5RAQ01344 420 aa11.7□□□□□ -0.54
SEC13-204ENST00000397099 APOFQ13790 326 aa11.7□□□□□ -0.54
SEC13-204ENST00000397099 NXNL2Q5VZ03 156 aa11.7□□□□□ -0.54
SEC13-204ENST00000397099 FAM57BQ71RH2 274 aa11.7□□□□□ -0.54
SEC13-204ENST00000397099 SPATC1Q76KD6 591 aa11.7□□□□□ -0.54
SEC13-204ENST00000397099 PRSS45Q7RTY3 260 aa11.7□□□□□ -0.54
SEC13-204ENST00000397099 KRT77Q7Z794 578 aa11.7□□□□□ -0.54
SEC13-204ENST00000397099 GID4Q8IVV7 300 aa11.7□□□□□ -0.54
SEC13-204ENST00000397099 OR8B3Q8NGG8 313 aa11.7□□□□□ -0.54
SEC13-204ENST00000397099 OR56B2PQ8NGI1 322 aa11.7□□□□□ -0.54
SEC13-204ENST00000397099 OR8S1Q8NH09 359 aa11.7□□□□□ -0.54
SEC13-204ENST00000397099 ZNF420Q8TAQ5 688 aaPredicted RBP11.7□□□□□ -0.54
SEC13-204ENST00000397099 OR8B2Q96RD0 313 aa11.7□□□□□ -0.54
SEC13-204ENST00000397099 MRI1Q9BV20 369 aa11.7□□□□□ -0.54
SEC13-204ENST00000397099 SSBP3Q9BWW4 388 aaPredicted RBP11.7□□□□□ -0.54
SEC13-204ENST00000397099 N6AMT1Q9Y5N5 214 aa11.7□□□□□ -0.54
SEC13-204ENST00000397099 MPC1Q9Y5U8 109 aa11.7□□□□□ -0.54
SEC13-204ENST00000397099 TRAV38-1A0A0B4J264 116 aa11.69□□□□□ -0.54
SEC13-204ENST00000397099 hCG_38984A0A1B0GV85 526 aa11.69□□□□□ -0.54
SEC13-204ENST00000397099 ANXA2P2A6NMY6 339 aa11.69□□□□□ -0.54
SEC13-204ENST00000397099 ZAR1LA6NP61 321 aa11.69□□□□□ -0.54
SEC13-204ENST00000397099 SELENOFO60613 162 aa11.69□□□□□ -0.54
SEC13-204ENST00000397099 CYB5R3P00387 301 aaPredicted RBP11.69□□□□□ -0.54
SEC13-204ENST00000397099 SLC2A1P11166 492 aa11.69□□□□□ -0.54
SEC13-204ENST00000397099 ADRA2CP18825 462 aa11.69□□□□□ -0.54
SEC13-204ENST00000397099 EPHA1P21709 976 aa11.69□□□□□ -0.54
SEC13-204ENST00000397099 FPR2P25090 351 aa11.69□□□□□ -0.54
SEC13-204ENST00000397099 GNB2P62879 340 aa11.69□□□□□ -0.54
SEC13-204ENST00000397099 ROM1Q03395 351 aa11.69□□□□□ -0.54
SEC13-204ENST00000397099 SLX4IPQ5VYV7 408 aa11.69□□□□□ -0.54
SEC13-204ENST00000397099 TMEM236Q5W0B7 351 aa11.69□□□□□ -0.54
SEC13-204ENST00000397099 ZFP1Q6P2D0 407 aa11.69□□□□□ -0.54
SEC13-204ENST00000397099 BTNL3Q6UXE8 466 aa11.69□□□□□ -0.54
SEC13-204ENST00000397099 LRRN1Q6UXK5 716 aa11.69□□□□□ -0.54
SEC13-204ENST00000397099 CCDC121Q6ZUS5 278 aa11.69□□□□□ -0.54
SEC13-204ENST00000397099 ZNF771Q7L3S4 317 aaPredicted RBP11.69□□□□□ -0.54
SEC13-204ENST00000397099 SGK3Q96BR1 496 aa11.69□□□□□ -0.54
SEC13-204ENST00000397099 TMEM246Q9BRR3 403 aa11.69□□□□□ -0.54
SEC13-204ENST00000397099 DCAF16Q9NXF7 216 aa11.69□□□□□ -0.54
SEC13-204ENST00000397099 HAO2Q9NYQ3 351 aa11.69□□□□□ -0.54
SEC13-204ENST00000397099 A0A0U1RQV5 110 aa11.68□□□□□ -0.54
SEC13-204ENST00000397099 FAM20BO75063 409 aa11.68□□□□□ -0.54
SEC13-204ENST00000397099 ZNF12P17014 697 aa11.68□□□□□ -0.54
SEC13-204ENST00000397099 GSK3AP49840 483 aa11.68□□□□□ -0.54
SEC13-204ENST00000397099 POU4F2Q12837 409 aa11.68□□□□□ -0.54
SEC13-204ENST00000397099 OR8B8Q15620 311 aa11.68□□□□□ -0.54
SEC13-204ENST00000397099 ZNF829Q3KNS6 432 aaPredicted RBP11.68□□□□□ -0.54
SEC13-204ENST00000397099 CD276Q5ZPR3 534 aa11.68□□□□□ -0.54
SEC13-204ENST00000397099 ASRGL1Q7L266 308 aa11.68□□□□□ -0.54
SEC13-204ENST00000397099 MEPCEQ7L2J0 689 aaKnown RBP11.68□□□□□ -0.54
SEC13-204ENST00000397099 ZNF679Q8IYX0 411 aa11.68□□□□□ -0.54
SEC13-204ENST00000397099 TMEM163Q8TC26 289 aa11.68□□□□□ -0.54
SEC13-204ENST00000397099 CNN2Q99439 309 aaKnown RBP11.68□□□□□ -0.54
SEC13-204ENST00000397099 RBM4BQ9BQ04 359 aaKnown RBP11.68□□□□□ -0.54
SEC13-204ENST00000397099 SUCNR1Q9BXA5 334 aa11.68□□□□□ -0.54
SEC13-204ENST00000397099 MOB1AQ9H8S9 216 aa11.68□□□□□ -0.54
SEC13-204ENST00000397099 RNPEPL1Q9HAU8 725 aa11.68□□□□□ -0.54
SEC13-204ENST00000397099 DNAJC27Q9NZQ0 273 aa11.68□□□□□ -0.54
SEC13-204ENST00000397099 CLN8Q9UBY8 286 aa11.68□□□□□ -0.54
SEC13-204ENST00000397099 ORC6Q9Y5N6 252 aa11.68□□□□□ -0.54
SEC13-204ENST00000397099 INSIG2Q9Y5U4 225 aa11.68□□□□□ -0.54
SEC13-204ENST00000397099 AUP1Q9Y679 476 aa11.68□□□□□ -0.54
SEC13-204ENST00000397099 LOC105371242A0A075B767 164 aa11.67□□□□□ -0.54
SEC13-204ENST00000397099 TMEM210A6NLX4 147 aa11.67□□□□□ -0.54
SEC13-204ENST00000397099 LGALS8O00214 317 aa11.67□□□□□ -0.54
SEC13-204ENST00000397099 CST4P01036 141 aa11.67□□□□□ -0.54
SEC13-204ENST00000397099 LIPFP07098 398 aa11.67□□□□□ -0.54
SEC13-204ENST00000397099 ZFP36P26651 326 aaKnown RBP11.67□□□□□ -0.54
SEC13-204ENST00000397099 CFHR2P36980 270 aa11.67□□□□□ -0.54
SEC13-204ENST00000397099 PMELP40967 661 aa11.67□□□□□ -0.54
SEC13-204ENST00000397099 NAA10P41227 235 aaPredicted RBP11.67□□□□□ -0.54
SEC13-204ENST00000397099 PITPNBP48739 271 aa11.67□□□□□ -0.54
SEC13-204ENST00000397099 RIDAP52758 137 aaKnown RBP11.67□□□□□ -0.54
SEC13-204ENST00000397099 EFNB1P98172 346 aa11.67□□□□□ -0.54
SEC13-204ENST00000397099 ZNF154Q13106 437 aa11.67□□□□□ -0.54
SEC13-204ENST00000397099 TMED1Q13445 227 aa11.67□□□□□ -0.54
SEC13-204ENST00000397099 ZBTB37Q5TC79 503 aa11.67□□□□□ -0.54
SEC13-204ENST00000397099 C12orf73Q69YU5 71 aa11.67□□□□□ -0.54
SEC13-204ENST00000397099 GALNT4Q8N4A0 578 aa11.67□□□□□ -0.54
SEC13-204ENST00000397099 BBS1Q8NFJ9 593 aa11.67□□□□□ -0.54
SEC13-204ENST00000397099 RFKQ969G6 155 aa11.67□□□□□ -0.54
SEC13-204ENST00000397099 AMELYQ99218 206 aa11.67□□□□□ -0.54
SEC13-204ENST00000397099 MICU1Q9BPX6 476 aa11.67□□□□□ -0.54
SEC13-204ENST00000397099 RTL8AQ9BWD3 113 aa11.67□□□□□ -0.54
SEC13-204ENST00000397099 UFSP2Q9NUQ7 469 aa11.67□□□□□ -0.54
SEC13-204ENST00000397099 WARS2Q9UGM6 360 aaKnown RBP11.67□□□□□ -0.54
SEC13-204ENST00000397099 LRP12Q9Y561 859 aa11.67□□□□□ -0.54
SEC13-204ENST00000397099 TMEM269A0A1B0GVZ9 245 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 OOEPA6NGQ2 149 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 A6NLC8 198 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 PRKYO43930 277 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 MTRF1O75570 445 aaKnown RBP11.66□□□□□ -0.54
SEC13-204ENST00000397099 MUC1P15941 1255 aaPredicted RBP11.66□□□□□ -0.54
SEC13-204ENST00000397099 PSMB10P40306 273 aa11.66□□□□□ -0.54
SEC13-204ENST00000397099 MAP2K3P46734 347 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms