RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 MS4A5Q9H3V2 200 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 METTL17Q9H7H0 456 aaPredicted RBP8.8□□□□□ -1
NEDD8-202ENST00000396828 ISG20L2Q9H9L3 353 aaKnown RBP8.8□□□□□ -1
NEDD8-202ENST00000396828 ISYNA1Q9NPH2 558 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 CENPMQ9NSP4 180 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 HIF1ANQ9NWT6 349 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 BABAM2Q9NXR7 383 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 KLHDC2Q9Y2U9 406 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 LSM2Q9Y333 95 aaKnown RBP8.8□□□□□ -1
NEDD8-202ENST00000396828 TIMM10BQ9Y5J6 103 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 LHFPL6Q9Y693 200 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 CMYA5Q8N3K9 4069 aa8.8□□□□□ -1
NEDD8-202ENST00000396828 ARHGAP32A7KAX9 2087 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 B4DSR2 109 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 ZNF878C9JN71 531 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 CDC14BO60729 498 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 UBL3O95164 117 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 SERPINA5P05154 406 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 H2BFMP0C1H6 154 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 ACHEP22303 614 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 GPR6P46095 362 aaPredicted RBP8.79□□□□□ -1
NEDD8-202ENST00000396828 RIDAP52758 137 aaKnown RBP8.79□□□□□ -1
NEDD8-202ENST00000396828 GALK2Q01415 458 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 BDH1Q02338 343 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 ACSM1Q08AH1 577 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 CCDC58Q4VC31 144 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 ARMCX4Q5H9R4 360 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 AVPI1Q5T686 147 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 TMEM53Q6P2H8 277 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 CORO6Q6QEF8 472 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 DEGS2Q6QHC5 323 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 LRRN1Q6UXK5 716 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 SPATC1Q76KD6 591 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 SATL1Q86VE3 508 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 KLBQ86Z14 1044 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 ZNF679Q8IYX0 411 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 SEMA6DQ8NFY4 1073 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 ST7LQ8TDW4 575 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 RNF133Q8WVZ7 376 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 RDH5Q92781 318 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 UFD1Q92890 307 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 TMEM186Q96B77 213 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 MAP6Q96JE9 813 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 RNF121Q9H920 327 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 SLCO1C1Q9NYB5 712 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 NDUFA13Q9P0J0 144 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 TAAR3PQ9P1P4 343 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 SPEF1Q9Y4P9 236 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 CACNG2Q9Y698 323 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 DYSFO75923 2080 aa8.79□□□□□ -1
NEDD8-202ENST00000396828 SMIM31A0A1B0GVY4 71 aa8.78□□□□□ -1
NEDD8-202ENST00000396828 A0A1W2PPW3 197 aa8.78□□□□□ -1
NEDD8-202ENST00000396828 PSMD9O00233 223 aa8.78□□□□□ -1
NEDD8-202ENST00000396828 CCRL2O00421 344 aa8.78□□□□□ -1
NEDD8-202ENST00000396828 RER1O15258 196 aa8.78□□□□□ -1
NEDD8-202ENST00000396828 PPIHO43447 177 aaKnown RBP8.78□□□□□ -1
NEDD8-202ENST00000396828 NOL3O60936 208 aaKnown RBP8.78□□□□□ -1
NEDD8-202ENST00000396828 RPP14O95059 124 aaKnown RBP8.78□□□□□ -1
NEDD8-202ENST00000396828 MSMBP08118 114 aa8.78□□□□□ -1
NEDD8-202ENST00000396828 PSKH1P11801 424 aa8.78□□□□□ -1
NEDD8-202ENST00000396828 CFPP27918 469 aa8.78□□□□□ -1
NEDD8-202ENST00000396828 HSD11B1P28845 292 aa8.78□□□□□ -1
NEDD8-202ENST00000396828 GP2P55259 537 aaKnown RBP8.78□□□□□ -1
NEDD8-202ENST00000396828 GRB2P62993 217 aaKnown RBP8.78□□□□□ -1
NEDD8-202ENST00000396828 CCL8P80075 99 aa8.78□□□□□ -1
NEDD8-202ENST00000396828 ECH1Q13011 328 aa8.78□□□□□ -1
NEDD8-202ENST00000396828 ZNF684Q5T5D7 378 aa8.78□□□□□ -1
NEDD8-202ENST00000396828 CFAP77Q6ZQR2 320 aa8.78□□□□□ -1
NEDD8-202ENST00000396828 GLCCI1Q86VQ1 547 aa8.78□□□□□ -1
NEDD8-202ENST00000396828 ALDH16A1Q8IZ83 802 aa8.78□□□□□ -1
NEDD8-202ENST00000396828 ZNF485Q8NCK3 441 aa8.78□□□□□ -1
NEDD8-202ENST00000396828 SLC30A7Q8NEW0 376 aa8.78□□□□□ -1
NEDD8-202ENST00000396828 OR13F1Q8NGS4 319 aa8.78□□□□□ -1
NEDD8-202ENST00000396828 OPALINQ96PE5 141 aa8.78□□□□□ -1
NEDD8-202ENST00000396828 AMELYQ99218 206 aa8.78□□□□□ -1
NEDD8-202ENST00000396828 ATF6BQ99941 703 aa8.78□□□□□ -1
NEDD8-202ENST00000396828 HDHD2Q9H0R4 259 aa8.78□□□□□ -1
NEDD8-202ENST00000396828 NIPAL2Q9H841 368 aa8.78□□□□□ -1
NEDD8-202ENST00000396828 ELOVL3Q9HB03 270 aa8.78□□□□□ -1
NEDD8-202ENST00000396828 ACOXLQ9NUZ1 547 aa8.78□□□□□ -1
NEDD8-202ENST00000396828 PLEK2Q9NYT0 353 aa8.78□□□□□ -1
NEDD8-202ENST00000396828 MRM2Q9UI43 246 aaKnown RBP8.78□□□□□ -1
NEDD8-202ENST00000396828 LRP12Q9Y561 859 aa8.78□□□□□ -1
NEDD8-202ENST00000396828 MGAM2Q2M2H8 2515 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 IGLV3-9A0A075B6K5 115 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 DPPA5A6NC42 116 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 CCDC160A6NGH7 325 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 C17orf100A8MU93 164 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 MAGEB4O15481 346 aaPredicted RBP8.77□□□□□ -1.01
NEDD8-202ENST00000396828 SGCEO43556 437 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 DOK2O60496 412 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 APOC1P02654 83 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 ZNF250P15622 560 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 CPEP16870 476 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 ZNF32P17041 273 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 CELP19835 753 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 PSMA1P25786 263 aaKnown RBP8.77□□□□□ -1.01
NEDD8-202ENST00000396828 DCTDP32321 178 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 OPRL1P41146 370 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 TGM4P49221 684 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms