RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 SERPINB11Q96P15 392 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 TIMM29Q9BSF4 260 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 MAP1LC3CQ9BXW4 147 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 OR51B6Q9H340 312 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 PARVBQ9HBI1 364 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 ANKHQ9HCJ1 492 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 C19orf12Q9NSK7 152 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 STMN3Q9NZ72 180 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 UVRAGQ9P2Y5 699 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 ZNF225Q9UK10 706 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 SLC22A13Q9Y226 551 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 FHOD3Q2V2M9 1422 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 WDR62O43379 1518 aa3.4□□□□□ -1.86
HMGB1P10-201ENST00000395823 NCBP2LA6PVI3 153 aaKnown RBP3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 TMEM114B3SHH9 223 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 H3BNH8 94 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 ENTPD5O75356 428 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 PSIP1O75475 530 aaKnown RBP3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 SUPT3HO75486 399 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 HBE1P02100 147 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 BGLAPP02818 100 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 IGHV4-34P06331 123 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 RPS17P08708 135 aaKnown RBP3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 GNAO1P09471 354 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 DTYMKP23919 212 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 TEAD1P28347 426 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 GTF2H1P32780 548 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 NUDT1P36639 197 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 CSKP41240 450 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 TNFSF9P41273 254 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 DNASE1L1P49184 302 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 SLC7A9P82251 487 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 SMARCB1Q12824 385 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 PSMD5Q16401 504 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 POU2AF1Q16633 256 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 RPEL1Q2QD12 228 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 TRMT5Q32P41 509 aaKnown RBP3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 SLC36A2Q495M3 483 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 YIF1BQ5BJH7 314 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 COA6Q5JTJ3 125 aaKnown RBP3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 ANKRD22Q5VYY1 191 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 C3orf33Q6P1S2 294 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 LYPD2Q6UXB3 125 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 SLC51BQ86UW2 128 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 FAM71E2Q8N5Q1 922 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 MCOLN3Q8TDD5 553 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 DTD1Q8TEA8 209 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 LZICQ8WZA0 190 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 CDS1Q92903 461 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 EEF1AKMT3Q96AZ1 226 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 CMTM5Q96DZ9 223 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 PPP1R36Q96LQ0 422 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 WFIKKN1Q96NZ8 548 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 PARD6GQ9BYG4 376 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 PEG3Q9GZU2 1588 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 SLC22A4Q9H015 551 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 SYT4Q9H2B2 425 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 C1orf198Q9H425 327 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 KIR3DX1Q9H7L2 352 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 NECAP2Q9NVZ3 263 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 CLN6Q9NWW5 311 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 POLR3HQ9Y535 204 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 CACNG2Q9Y698 323 aa3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 COL22A1Q8NFW1 1626 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P10-201ENST00000395823 NACADO15069 1562 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 CIB4A0PJX0 185 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 PLAC8L1A1L4L8 177 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 SMLR1H3BR10 107 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 PRMT5O14744 637 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 KMOO15229 486 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 GMDSO60547 372 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 SLC19A2O60779 497 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 ZMPSTE24O75844 475 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 PSMG1O95456 288 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 APOEP02649 317 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 ARG1P05089 322 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 ZNF7P17097 686 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 CSNK2A2P19784 350 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 HTR2CP28335 458 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 ARR3P36575 388 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 CD79BP40259 229 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 MAGEA3P43357 314 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 MAGEA6P43360 314 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 ZNF138P52744 262 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 MLF1P58340 268 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 CXCR4P61073 352 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 ZNF33AQ06730 810 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 NAB1Q13506 487 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 PDK2Q15119 407 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 GUK1Q16774 197 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 C5orf64Q2M2E5 130 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 TTLL9Q3SXZ7 439 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 COX19Q49B96 90 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 SDHAF4Q5VUM1 108 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 UBE2UQ5VVX9 321 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 SPOPLQ6IQ16 392 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 TEX43Q6ZNM6 134 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 SETD3Q86TU7 594 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 MREGQ8N565 214 aa3.39□□□□□ -1.87
HMGB1P10-201ENST00000395823 TRAM1L1Q8N609 369 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms