RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 RGS10O43665 173 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 RP2O75695 350 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 PNPP00491 289 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 HLA-DPB1P04440 258 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 CD55P08174 381 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 FOSL1P15407 271 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 GIFP27352 417 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 C21orf33P30042 268 aaPredicted RBP14.04□□□□□ -0.16
CXCL1-201ENST00000395761 NR4A2P43354 598 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 RIDAP52758 137 aaKnown RBP14.04□□□□□ -0.16
CXCL1-201ENST00000395761 TNFAIP6P98066 277 aaPredicted RBP14.04□□□□□ -0.16
CXCL1-201ENST00000395761 FAM3AP98173 230 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 MVKQ03426 396 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 ZNF85Q03923 595 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 EGR3Q06889 387 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 MFGE8Q08431 387 aaPredicted RBP14.04□□□□□ -0.16
CXCL1-201ENST00000395761 RIN1Q13671 783 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 IRF3Q14653 427 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 TIGD6Q17RP2 521 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 ZNF684Q5T5D7 378 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 KCTD20Q7Z5Y7 419 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 OR10AD1Q8NGE0 317 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 OR8B12Q8NGG6 310 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 OR52H1Q8NGJ2 320 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 OR13G1Q8NGZ3 307 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 SGCDQ92629 289 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 ELMOD3Q96FG2 381 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 DIRC2Q96SL1 478 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 PIMREGQ9BSJ6 248 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 SOX7Q9BT81 388 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 BPESC1Q9GZL8 116 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 GSX1Q9H4S2 264 aaPredicted RBP14.04□□□□□ -0.16
CXCL1-201ENST00000395761 SAP30LQ9HAJ7 183 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 ERVK13-1Q9NX77 482 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 TREM2Q9NZC2 230 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 MED13LQ71F56 2210 aa14.04□□□□□ -0.16
CXCL1-201ENST00000395761 CHD3Q12873 2000 aaKnown RBP14.03□□□□□ -0.16
CXCL1-201ENST00000395761 IGHV1-69-2A0A0G2JMI3 117 aa14.03□□□□□ -0.16
CXCL1-201ENST00000395761 A0A1B0GWJ7 208 aa14.03□□□□□ -0.16
CXCL1-201ENST00000395761 SRSF10O75494 262 aaKnown RBP14.03□□□□□ -0.16
CXCL1-201ENST00000395761 LIMS3P0CW19 117 aa14.03□□□□□ -0.16
CXCL1-201ENST00000395761 LIMS4P0CW20 117 aa14.03□□□□□ -0.16
CXCL1-201ENST00000395761 SLC25A16P16260 332 aa14.03□□□□□ -0.16
CXCL1-201ENST00000395761 ACHEP22303 614 aa14.03□□□□□ -0.16
CXCL1-201ENST00000395761 EEF1B2P24534 225 aaKnown RBP14.03□□□□□ -0.16
CXCL1-201ENST00000395761 DCTDP32321 178 aa14.03□□□□□ -0.16
CXCL1-201ENST00000395761 CRYBB2P43320 205 aa14.03□□□□□ -0.16
CXCL1-201ENST00000395761 MRPS11P82912 194 aaKnown RBP14.03□□□□□ -0.16
CXCL1-201ENST00000395761 CDONQ4KMG0 1287 aa14.03□□□□□ -0.16
CXCL1-201ENST00000395761 LHFPL3Q86UP9 236 aa14.03□□□□□ -0.16
CXCL1-201ENST00000395761 OR56B2PQ8NGI1 322 aa14.03□□□□□ -0.16
CXCL1-201ENST00000395761 MRPL48Q96GC5 212 aaKnown RBP14.03□□□□□ -0.16
CXCL1-201ENST00000395761 LYZL4Q96KX0 146 aa14.03□□□□□ -0.16
CXCL1-201ENST00000395761 EGLN1Q9GZT9 426 aa14.03□□□□□ -0.16
CXCL1-201ENST00000395761 PBOV1Q9GZY1 135 aa14.03□□□□□ -0.16
CXCL1-201ENST00000395761 ZNF275Q9NSD4 429 aaPredicted RBP14.03□□□□□ -0.16
CXCL1-201ENST00000395761 TMEM100Q9NV29 134 aa14.03□□□□□ -0.16
CXCL1-201ENST00000395761 CHCHD3Q9NX63 227 aaKnown RBP14.03□□□□□ -0.16
CXCL1-201ENST00000395761 hCG_38984A0A1B0GV85 526 aa14.02□□□□□ -0.17
CXCL1-201ENST00000395761 METTL15A6NJ78 407 aa14.02□□□□□ -0.17
CXCL1-201ENST00000395761 ACOD1A6NK06 481 aa14.02□□□□□ -0.17
CXCL1-201ENST00000395761 F5H5P2 479 aa14.02□□□□□ -0.17
CXCL1-201ENST00000395761 SULT1C4O75897 302 aa14.02□□□□□ -0.17
CXCL1-201ENST00000395761 RPP14O95059 124 aaKnown RBP14.02□□□□□ -0.17
CXCL1-201ENST00000395761 HTR1AP08908 422 aa14.02□□□□□ -0.17
CXCL1-201ENST00000395761 MYL12AP19105 171 aa14.02□□□□□ -0.17
CXCL1-201ENST00000395761 CA6P23280 308 aa14.02□□□□□ -0.17
CXCL1-201ENST00000395761 GSK3AP49840 483 aa14.02□□□□□ -0.17
CXCL1-201ENST00000395761 ETV1P50549 477 aa14.02□□□□□ -0.17
CXCL1-201ENST00000395761 SYS1Q8N2H4 156 aa14.02□□□□□ -0.17
CXCL1-201ENST00000395761 YIPF7Q8N8F6 280 aa14.02□□□□□ -0.17
CXCL1-201ENST00000395761 ITLN1Q8WWA0 313 aa14.02□□□□□ -0.17
CXCL1-201ENST00000395761 OR2V2Q96R30 315 aa14.02□□□□□ -0.17
CXCL1-201ENST00000395761 OPA3Q9H6K4 179 aa14.02□□□□□ -0.17
CXCL1-201ENST00000395761 CHODLQ9H9P2 273 aa14.02□□□□□ -0.17
CXCL1-201ENST00000395761 G6PC2Q9NQR9 355 aa14.02□□□□□ -0.17
CXCL1-201ENST00000395761 CAB39Q9Y376 341 aaPredicted RBP14.02□□□□□ -0.17
CXCL1-201ENST00000395761 IGHV4-61A0A0C4DH41 118 aa14.01□□□□□ -0.17
CXCL1-201ENST00000395761 IGHV3-64DA0A0J9YX35 117 aa14.01□□□□□ -0.17
CXCL1-201ENST00000395761 MT-ND2P03891 347 aa14.01□□□□□ -0.17
CXCL1-201ENST00000395761 KRT8P05787 483 aa14.01□□□□□ -0.17
CXCL1-201ENST00000395761 TNFSF4P23510 183 aa14.01□□□□□ -0.17
CXCL1-201ENST00000395761 MMP16P51512 607 aa14.01□□□□□ -0.17
CXCL1-201ENST00000395761 ZNF829Q3KNS6 432 aaPredicted RBP14.01□□□□□ -0.17
CXCL1-201ENST00000395761 TP53I3Q53FA7 332 aa14.01□□□□□ -0.17
CXCL1-201ENST00000395761 LIPNQ5VXI9 398 aa14.01□□□□□ -0.17
CXCL1-201ENST00000395761 ZNF773Q6PK81 442 aa14.01□□□□□ -0.17
CXCL1-201ENST00000395761 NANOGP1Q8N7R0 232 aa14.01□□□□□ -0.17
CXCL1-201ENST00000395761 OR52N1Q8NH53 320 aa14.01□□□□□ -0.17
CXCL1-201ENST00000395761 CCL17Q92583 94 aa14.01□□□□□ -0.17
CXCL1-201ENST00000395761 DVL3Q92997 716 aaPredicted RBP14.01□□□□□ -0.17
CXCL1-201ENST00000395761 ALG8Q9BVK2 526 aa14.01□□□□□ -0.17
CXCL1-201ENST00000395761 RGCCQ9H4X1 137 aa14.01□□□□□ -0.17
CXCL1-201ENST00000395761 PPP1R3EQ9H7J1 279 aa14.01□□□□□ -0.17
CXCL1-201ENST00000395761 DCAF16Q9NXF7 216 aa14.01□□□□□ -0.17
CXCL1-201ENST00000395761 IL19Q9UHD0 177 aa14.01□□□□□ -0.17
CXCL1-201ENST00000395761 CLEC2DQ9UHP7 191 aa14.01□□□□□ -0.17
CXCL1-201ENST00000395761 GTF2A1LQ9UNN4 478 aa14.01□□□□□ -0.17
CXCL1-201ENST00000395761 ERGIC3Q9Y282 383 aa14.01□□□□□ -0.17
CXCL1-201ENST00000395761 R4GMQ9 66 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms